RNA–Protein interactions for RNA: ENST00000509712.5

CCDC30-213, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-213ENST00000509712 EXOC8Q8IYI6 725 aa6.26□□□□□ -1.41
CCDC30-213ENST00000509712 FAM177A1Q8N128 213 aaPredicted RBP6.26□□□□□ -1.41
CCDC30-213ENST00000509712 SMG9Q9H0W8 520 aaKnown RBP6.26□□□□□ -1.41
CCDC30-213ENST00000509712 BSDC1Q9NW68 430 aaPredicted RBP6.26□□□□□ -1.41
CCDC30-213ENST00000509712 TRIM33Q9UPN9 1127 aa6.26□□□□□ -1.41
CCDC30-213ENST00000509712 TMEM238LA0A1B0GVL6 79 aa6.25□□□□□ -1.41
CCDC30-213ENST00000509712 NRDCO43847 1150 aa6.25□□□□□ -1.41
CCDC30-213ENST00000509712 RASSF7Q02833 373 aa6.25□□□□□ -1.41
CCDC30-213ENST00000509712 PTPN12Q05209 780 aaKnown RBP6.25□□□□□ -1.41
CCDC30-213ENST00000509712 COL9A3Q14050 684 aaPredicted RBP6.25□□□□□ -1.41
CCDC30-213ENST00000509712 SPRED3Q2MJR0 410 aa6.25□□□□□ -1.41
CCDC30-213ENST00000509712 TSNAXIP1Q2TAA8 658 aa6.25□□□□□ -1.41
CCDC30-213ENST00000509712 KANK3Q6NY19 840 aa6.25□□□□□ -1.41
CCDC30-213ENST00000509712 CHSY3Q70JA7 882 aa6.25□□□□□ -1.41
CCDC30-213ENST00000509712 ILDR2Q71H61 639 aa6.25□□□□□ -1.41
CCDC30-213ENST00000509712 ADAM19Q9H013 955 aa6.25□□□□□ -1.41
CCDC30-213ENST00000509712 SOX13Q9UN79 622 aa6.25□□□□□ -1.41
CCDC30-213ENST00000509712 SH3BP1Q9Y3L3 701 aa6.25□□□□□ -1.41
CCDC30-213ENST00000509712 USP31Q70CQ4 1352 aa6.25□□□□□ -1.41
CCDC30-213ENST00000509712 RNF225M0QZC1 329 aaPredicted RBP6.24□□□□□ -1.41
CCDC30-213ENST00000509712 SMNDC1O75940 238 aaKnown RBP eCLIP6.24□□□□□ -1.41
CCDC30-213ENST00000509712 GSTT1P30711 240 aa6.24□□□□□ -1.41
CCDC30-213ENST00000509712 ITGAEP38570 1179 aa6.24□□□□□ -1.41
CCDC30-213ENST00000509712 SSR1P43307 286 aaKnown RBP6.24□□□□□ -1.41
CCDC30-213ENST00000509712 MEI1Q5TIA1 1274 aa6.24□□□□□ -1.41
CCDC30-213ENST00000509712 CEP135Q66GS9 1140 aa6.24□□□□□ -1.41
CCDC30-213ENST00000509712 ELMSAN1Q6PJG2 1045 aa6.24□□□□□ -1.41
CCDC30-213ENST00000509712 TMTC2Q8N394 836 aa6.24□□□□□ -1.41
CCDC30-213ENST00000509712 MICALL1Q8N3F8 863 aa6.24□□□□□ -1.41
CCDC30-213ENST00000509712 OTUD6BQ8N6M0 293 aa6.24□□□□□ -1.41
CCDC30-213ENST00000509712 TSPYL1Q9H0U9 437 aa6.24□□□□□ -1.41
CCDC30-213ENST00000509712 RBSNQ9H1K0 784 aa6.24□□□□□ -1.41
CCDC30-213ENST00000509712 ZNF576Q9H609 170 aa6.24□□□□□ -1.41
CCDC30-213ENST00000509712 PRDM6Q9NQX0 595 aa6.24□□□□□ -1.41
CCDC30-213ENST00000509712 RAI14Q9P0K7 980 aa6.24□□□□□ -1.41
CCDC30-213ENST00000509712 A0A096LPE4 126 aa6.23□□□□□ -1.41
CCDC30-213ENST00000509712 A0A1W2PPZ6 126 aa6.23□□□□□ -1.41
CCDC30-213ENST00000509712 XRCC5P13010 732 aaKnown RBP6.23□□□□□ -1.41
CCDC30-213ENST00000509712 TCF3P15923 654 aa6.23□□□□□ -1.41
CCDC30-213ENST00000509712 ALAS2P22557 587 aa6.23□□□□□ -1.41
CCDC30-213ENST00000509712 BAG6P46379 1132 aa6.23□□□□□ -1.41
CCDC30-213ENST00000509712 ST13P50502 369 aaKnown RBP6.23□□□□□ -1.41
CCDC30-213ENST00000509712 FCGRTP55899 365 aa6.23□□□□□ -1.41
CCDC30-213ENST00000509712 FANCCQ00597 558 aa6.23□□□□□ -1.41
CCDC30-213ENST00000509712 SETDB1Q15047 1291 aa6.23□□□□□ -1.41
CCDC30-213ENST00000509712 L1TD1Q5T7N2 865 aaKnown RBP6.23□□□□□ -1.41
CCDC30-213ENST00000509712 TSHZ1Q6ZSZ6 1077 aa6.23□□□□□ -1.41
CCDC30-213ENST00000509712 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.23□□□□□ -1.41
CCDC30-213ENST00000509712 BTBD6Q96KE9 485 aa6.23□□□□□ -1.41
CCDC30-213ENST00000509712 MUC3BQ9H195 1237 aa6.23□□□□□ -1.41
CCDC30-213ENST00000509712 RBM28Q9NW13 759 aaKnown RBP6.23□□□□□ -1.41
CCDC30-213ENST00000509712 TERF2IPQ9NYB0 399 aa6.23□□□□□ -1.41
CCDC30-213ENST00000509712 PPM1HQ9ULR3 514 aa6.23□□□□□ -1.41
CCDC30-213ENST00000509712 DGKGP49619 791 aa6.23□□□□□ -1.41
CCDC30-213ENST00000509712 AFF1P51825 1210 aaKnown RBP6.23□□□□□ -1.41
CCDC30-213ENST00000509712 C8orf86Q6ZUL3 223 aa6.23□□□□□ -1.41
CCDC30-213ENST00000509712 VN1R5Q7Z5H4 357 aa6.23□□□□□ -1.41
CCDC30-213ENST00000509712 METTL16Q86W50 562 aaKnown RBP6.23□□□□□ -1.41
CCDC30-213ENST00000509712 NUDT8Q8WV74 236 aa6.23□□□□□ -1.41
CCDC30-213ENST00000509712 ENAMQ9NRM1 1142 aa6.23□□□□□ -1.41
CCDC30-213ENST00000509712 M0R082 166 aa6.22□□□□□ -1.41
CCDC30-213ENST00000509712 SCAMP3O14828 347 aaKnown RBP6.22□□□□□ -1.41
CCDC30-213ENST00000509712 TM4SF5O14894 197 aa6.22□□□□□ -1.41
CCDC30-213ENST00000509712 RGS9O75916 674 aaPredicted RBP6.22□□□□□ -1.41
CCDC30-213ENST00000509712 EPHA1P21709 976 aa6.22□□□□□ -1.41
CCDC30-213ENST00000509712 FAAP100Q0VG06 881 aa6.22□□□□□ -1.41
CCDC30-213ENST00000509712 NEDD1Q8NHV4 660 aa6.22□□□□□ -1.41
CCDC30-213ENST00000509712 ZNF417Q8TAU3 575 aa6.22□□□□□ -1.41
CCDC30-213ENST00000509712 BSNDQ8WZ55 320 aa6.22□□□□□ -1.41
CCDC30-213ENST00000509712 ZNF587Q96SQ5 575 aaPredicted RBP6.22□□□□□ -1.41
CCDC30-213ENST00000509712 JPH1Q9HDC5 661 aaPredicted RBP6.22□□□□□ -1.41
CCDC30-213ENST00000509712 METTL5Q9NRN9 209 aaKnown RBP6.22□□□□□ -1.41
CCDC30-213ENST00000509712 VGLL3A8MV65 326 aa6.21□□□□□ -1.42
CCDC30-213ENST00000509712 NID1P14543 1247 aa6.21□□□□□ -1.42
CCDC30-213ENST00000509712 PTPRAP18433 802 aa6.21□□□□□ -1.42
CCDC30-213ENST00000509712 HDLBPQ00341 1268 aaKnown RBP6.21□□□□□ -1.42
CCDC30-213ENST00000509712 ZKSCAN8Q15776 578 aaPredicted RBP6.21□□□□□ -1.42
CCDC30-213ENST00000509712 DTHD1Q6ZMT9 781 aa6.21□□□□□ -1.42
CCDC30-213ENST00000509712 TMEM87AQ8NBN3 555 aa6.21□□□□□ -1.42
CCDC30-213ENST00000509712 ASAP3Q8TDY4 903 aa6.21□□□□□ -1.42
CCDC30-213ENST00000509712 MKL1Q969V6 931 aa6.21□□□□□ -1.42
CCDC30-213ENST00000509712 AMPD1P23109 780 aa6.2□□□□□ -1.42
CCDC30-213ENST00000509712 CALRP27797 417 aaKnown RBP6.2□□□□□ -1.42
CCDC30-213ENST00000509712 SATB1Q01826 763 aa6.2□□□□□ -1.42
CCDC30-213ENST00000509712 MAP2K1Q02750 393 aaPredicted RBP6.2□□□□□ -1.42
CCDC30-213ENST00000509712 TAF1CQ15572 869 aaPredicted RBP6.2□□□□□ -1.42
CCDC30-213ENST00000509712 RPS26P11Q5JNZ5 115 aaPredicted RBP6.2□□□□□ -1.42
CCDC30-213ENST00000509712 NBPF6Q5VWK0 638 aa6.2□□□□□ -1.42
CCDC30-213ENST00000509712 NBPF5PQ86XG9 351 aaPredicted RBP6.2□□□□□ -1.42
CCDC30-213ENST00000509712 NBPF4Q96M43 638 aa6.2□□□□□ -1.42
CCDC30-213ENST00000509712 LACRTQ9GZZ8 138 aa6.2□□□□□ -1.42
CCDC30-213ENST00000509712 CLEC4MQ9H2X3 399 aaPredicted RBP6.2□□□□□ -1.42
CCDC30-213ENST00000509712 RRAGDQ9NQL2 400 aaPredicted RBP6.2□□□□□ -1.42
CCDC30-213ENST00000509712 SH2B1Q9NRF2 756 aaPredicted RBP6.2□□□□□ -1.42
CCDC30-213ENST00000509712 ADAMTS8Q9UP79 889 aa6.2□□□□□ -1.42
CCDC30-213ENST00000509712 LILRB5O75023 590 aa6.19□□□□□ -1.42
CCDC30-213ENST00000509712 B3GALT4O96024 378 aa6.19□□□□□ -1.42
CCDC30-213ENST00000509712 RAD51AP2Q09MP3 1159 aa6.19□□□□□ -1.42
CCDC30-213ENST00000509712 ZCCHC6Q5VYS8 1495 aaKnown RBP6.19□□□□□ -1.42
CCDC30-213ENST00000509712 GDF6Q6KF10 455 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms