RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 RAB6AP20340 208 aa7.06□□□□□ -1.28
NIPBL-206ENST00000509429 FYB2Q5VWT5 728 aa7.06□□□□□ -1.28
NIPBL-206ENST00000509429 C14orf37Q86TY3 774 aa7.06□□□□□ -1.28
NIPBL-206ENST00000509429 TRIP4Q15650 581 aaPredicted RBP7.05□□□□□ -1.28
NIPBL-206ENST00000509429 SKOR2Q2VWA4 1001 aaPredicted RBP7.05□□□□□ -1.28
NIPBL-206ENST00000509429 SEZ6L2Q6UXD5 910 aa7.05□□□□□ -1.28
NIPBL-206ENST00000509429 ZNF594Q96JF6 807 aaPredicted RBP7.05□□□□□ -1.28
NIPBL-206ENST00000509429 HRASLS5Q96KN8 279 aa7.05□□□□□ -1.28
NIPBL-206ENST00000509429 ALG2Q9H553 416 aa7.05□□□□□ -1.28
NIPBL-206ENST00000509429 CTNND2Q9UQB3 1225 aa7.05□□□□□ -1.28
NIPBL-206ENST00000509429 ACTL7BQ9Y614 415 aa7.05□□□□□ -1.28
NIPBL-206ENST00000509429 BMP7P18075 431 aa7.04□□□□□ -1.28
NIPBL-206ENST00000509429 TTC39BQ5VTQ0 682 aaPredicted RBP7.04□□□□□ -1.28
NIPBL-206ENST00000509429 NCAPG2Q86XI2 1143 aa7.04□□□□□ -1.28
NIPBL-206ENST00000509429 CXorf38Q8TB03 319 aa7.04□□□□□ -1.28
NIPBL-206ENST00000509429 SMG5Q9UPR3 1016 aaKnown RBP7.04□□□□□ -1.28
NIPBL-206ENST00000509429 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.03□□□□□ -1.28
NIPBL-206ENST00000509429 ADH5P11766 374 aa7.03□□□□□ -1.28
NIPBL-206ENST00000509429 SEC13P55735 322 aa7.03□□□□□ -1.28
NIPBL-206ENST00000509429 LINC00310P59036 64 aa7.03□□□□□ -1.28
NIPBL-206ENST00000509429 IFI16Q16666 785 aaKnown RBP7.03□□□□□ -1.28
NIPBL-206ENST00000509429 ZXDCQ2QGD7 858 aaPredicted RBP7.03□□□□□ -1.28
NIPBL-206ENST00000509429 FAM181AQ8N9Y4 354 aa7.03□□□□□ -1.28
NIPBL-206ENST00000509429 ACSS3Q9H6R3 686 aa7.03□□□□□ -1.28
NIPBL-206ENST00000509429 PRDM7Q9NQW5 492 aa7.03□□□□□ -1.28
NIPBL-206ENST00000509429 USP17L3A6NCW0 530 aa7.02□□□□□ -1.29
NIPBL-206ENST00000509429 USP17L4A6NCW7 530 aa7.02□□□□□ -1.29
NIPBL-206ENST00000509429 TMEM67Q5HYA8 995 aa7.02□□□□□ -1.29
NIPBL-206ENST00000509429 USP17L2Q6R6M4 530 aa7.02□□□□□ -1.29
NIPBL-206ENST00000509429 USP17L1Q7RTZ2 530 aa7.02□□□□□ -1.29
NIPBL-206ENST00000509429 DIRC2Q96SL1 478 aa7.02□□□□□ -1.29
NIPBL-206ENST00000509429 HINFPQ9BQA5 517 aa7.02□□□□□ -1.29
NIPBL-206ENST00000509429 NSUN3Q9H649 340 aaKnown RBP7.02□□□□□ -1.29
NIPBL-206ENST00000509429 CNTNAP4Q9C0A0 1308 aa7.01□□□□□ -1.29
NIPBL-206ENST00000509429 UBAP1LF5GYI3 381 aa7.01□□□□□ -1.29
NIPBL-206ENST00000509429 OVOL3O00110 214 aa7.01□□□□□ -1.29
NIPBL-206ENST00000509429 GLDCP23378 1020 aa7.01□□□□□ -1.29
NIPBL-206ENST00000509429 IRF2BPLQ9H1B7 796 aa7.01□□□□□ -1.29
NIPBL-206ENST00000509429 RTEL1Q9NZ71 1219 aa7.01□□□□□ -1.29
NIPBL-206ENST00000509429 MKRN1Q9UHC7 482 aaKnown RBP7.01□□□□□ -1.29
NIPBL-206ENST00000509429 SOX13Q9UN79 622 aa7.01□□□□□ -1.29
NIPBL-206ENST00000509429 SOX1O00570 391 aaPredicted RBP7□□□□□ -1.29
NIPBL-206ENST00000509429 KIRREL1Q96J84 757 aa7□□□□□ -1.29
NIPBL-206ENST00000509429 DYNC1LI2O43237 492 aaPredicted RBP6.99□□□□□ -1.29
NIPBL-206ENST00000509429 KCNC2Q96PR1 638 aa6.99□□□□□ -1.29
NIPBL-206ENST00000509429 MKNK2Q9HBH9 465 aa6.99□□□□□ -1.29
NIPBL-206ENST00000509429 LRFN2Q9ULH4 789 aa6.99□□□□□ -1.29
NIPBL-206ENST00000509429 TMEM265A0A087WTH1 108 aa6.98□□□□□ -1.29
NIPBL-206ENST00000509429 ETV2O00321 342 aaPredicted RBP6.98□□□□□ -1.29
NIPBL-206ENST00000509429 FAM9AQ8IZU1 332 aaPredicted RBP6.98□□□□□ -1.29
NIPBL-206ENST00000509429 IL27Q8NEV9 243 aa6.98□□□□□ -1.29
NIPBL-206ENST00000509429 FAM105AQ9NUU6 356 aa6.98□□□□□ -1.29
NIPBL-206ENST00000509429 IKBKEQ14164 716 aa6.97□□□□□ -1.29
NIPBL-206ENST00000509429 CRELD1Q96HD1 420 aa6.97□□□□□ -1.29
NIPBL-206ENST00000509429 SOX17Q9H6I2 414 aaPredicted RBP6.97□□□□□ -1.29
NIPBL-206ENST00000509429 NFKBIEO00221 500 aa6.96□□□□□ -1.3
NIPBL-206ENST00000509429 CYP2E1P05181 493 aaPredicted RBP6.96□□□□□ -1.3
NIPBL-206ENST00000509429 CELA3BP08861 270 aa6.96□□□□□ -1.3
NIPBL-206ENST00000509429 PDIA4P13667 645 aaKnown RBP6.96□□□□□ -1.3
NIPBL-206ENST00000509429 DYMQ7RTS9 669 aa6.96□□□□□ -1.3
NIPBL-206ENST00000509429 VTI1AQ96AJ9 217 aa6.96□□□□□ -1.3
NIPBL-206ENST00000509429 PDE2AO00408 941 aaPredicted RBP6.95□□□□□ -1.3
NIPBL-206ENST00000509429 LGR5O75473 907 aa6.95□□□□□ -1.3
NIPBL-206ENST00000509429 DCP1AQ9NPI6 582 aaPredicted RBP6.95□□□□□ -1.3
NIPBL-206ENST00000509429 DAGLAQ9Y4D2 1042 aa6.95□□□□□ -1.3
NIPBL-206ENST00000509429 U3KQE9 123 aa6.95□□□□□ -1.3
NIPBL-206ENST00000509429 FAM87AP0C7U9 286 aa6.94□□□□□ -1.3
NIPBL-206ENST00000509429 ZP2Q05996 745 aa6.94□□□□□ -1.3
NIPBL-206ENST00000509429 TRIM26Q12899 539 aaPredicted RBP6.94□□□□□ -1.3
NIPBL-206ENST00000509429 KCNK12Q9HB15 430 aa6.94□□□□□ -1.3
NIPBL-206ENST00000509429 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.94□□□□□ -1.3
NIPBL-206ENST00000509429 ABI2Q9NYB9 513 aaPredicted RBP6.94□□□□□ -1.3
NIPBL-206ENST00000509429 NISCHQ9Y2I1 1504 aa6.94□□□□□ -1.3
NIPBL-206ENST00000509429 FOXO3O43524 673 aa6.93□□□□□ -1.3
NIPBL-206ENST00000509429 CEACAM5P06731 702 aa6.93□□□□□ -1.3
NIPBL-206ENST00000509429 ASPAP45381 313 aa6.93□□□□□ -1.3
NIPBL-206ENST00000509429 CYFIP1Q7L576 1253 aa6.93□□□□□ -1.3
NIPBL-206ENST00000509429 MARCH10Q8NA82 808 aaPredicted RBP6.93□□□□□ -1.3
NIPBL-206ENST00000509429 UBE2Q2Q8WVN8 375 aa6.93□□□□□ -1.3
NIPBL-206ENST00000509429 PIK3R5Q8WYR1 880 aa6.93□□□□□ -1.3
NIPBL-206ENST00000509429 EPB41L4BQ9H329 900 aa6.93□□□□□ -1.3
NIPBL-206ENST00000509429 LGR6Q9HBX8 967 aa6.93□□□□□ -1.3
NIPBL-206ENST00000509429 PLAGL2Q9UPG8 496 aa6.93□□□□□ -1.3
NIPBL-206ENST00000509429 FNDC3AQ9Y2H6 1198 aaKnown RBP6.93□□□□□ -1.3
NIPBL-206ENST00000509429 ERICH6BQ5W0A0 696 aa6.92□□□□□ -1.3
NIPBL-206ENST00000509429 ARHGAP27Q6ZUM4 889 aa6.92□□□□□ -1.3
NIPBL-206ENST00000509429 KCNN1Q92952 543 aa6.92□□□□□ -1.3
NIPBL-206ENST00000509429 GSX1Q9H4S2 264 aaPredicted RBP6.92□□□□□ -1.3
NIPBL-206ENST00000509429 DZANK1Q9NVP4 752 aa6.92□□□□□ -1.3
NIPBL-206ENST00000509429 OXCT1P55809 520 aa6.91□□□□□ -1.3
NIPBL-206ENST00000509429 VN1R5Q7Z5H4 357 aa6.91□□□□□ -1.3
NIPBL-206ENST00000509429 BSNDQ8WZ55 320 aa6.91□□□□□ -1.3
NIPBL-206ENST00000509429 SNX11Q9Y5W9 270 aa6.91□□□□□ -1.3
NIPBL-206ENST00000509429 A6NJR5 290 aa6.9□□□□□ -1.3
NIPBL-206ENST00000509429 AKAP8O43823 692 aaKnown RBP6.9□□□□□ -1.3
NIPBL-206ENST00000509429 EIF4EBP3O60516 100 aaPredicted RBP6.9□□□□□ -1.3
NIPBL-206ENST00000509429 IKZF1Q13422 519 aa6.9□□□□□ -1.3
NIPBL-206ENST00000509429 ETFBKMTQ8IXQ9 262 aa6.9□□□□□ -1.3
NIPBL-206ENST00000509429 ASB11Q8WXH4 323 aa6.9□□□□□ -1.3
NIPBL-206ENST00000509429 FAM13BQ9NYF5 915 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms