RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 ALDH8A1Q9H2A2 487 aaPredicted RBP17.57■□□□□ 0.4
PHF3-209ENST00000509330 BCORQ6W2J9 1755 aa17.57■□□□□ 0.4
PHF3-209ENST00000509330 KLF18A0A0U1RQI7 1052 aa17.56■□□□□ 0.4
PHF3-209ENST00000509330 CTDNEP1O95476 244 aa17.56■□□□□ 0.4
PHF3-209ENST00000509330 CYP7A1P22680 504 aa17.56■□□□□ 0.4
PHF3-209ENST00000509330 PDIA3P30101 505 aaKnown RBP17.56■□□□□ 0.4
PHF3-209ENST00000509330 CEBPZQ03701 1054 aaKnown RBP17.56■□□□□ 0.4
PHF3-209ENST00000509330 TXNRD3Q86VQ6 643 aa17.56■□□□□ 0.4
PHF3-209ENST00000509330 NCOA7Q8NI08 942 aa17.56■□□□□ 0.4
PHF3-209ENST00000509330 BCL11BQ9C0K0 894 aaPredicted RBP17.56■□□□□ 0.4
PHF3-209ENST00000509330 NAPBQ9H115 298 aa17.56■□□□□ 0.4
PHF3-209ENST00000509330 CAVIN4Q5BKX8 364 aa17.56■□□□□ 0.4
PHF3-209ENST00000509330 SLC4A4Q9Y6R1 1079 aa17.56■□□□□ 0.4
PHF3-209ENST00000509330 RTL9Q8NET4 1388 aa17.56■□□□□ 0.4
PHF3-209ENST00000509330 TDO2P48775 406 aa17.55■□□□□ 0.4
PHF3-209ENST00000509330 MRE11P49959 708 aa17.55■□□□□ 0.4
PHF3-209ENST00000509330 TRDNQ13061 729 aa17.55■□□□□ 0.4
PHF3-209ENST00000509330 KRT27Q7Z3Y8 459 aa17.55■□□□□ 0.4
PHF3-209ENST00000509330 FAM84BQ96KN1 310 aaPredicted RBP17.55■□□□□ 0.4
PHF3-209ENST00000509330 SENP2Q9HC62 589 aa17.55■□□□□ 0.4
PHF3-209ENST00000509330 LAMA4Q16363 1823 aa17.55■□□□□ 0.4
PHF3-209ENST00000509330 ATRNO75882 1429 aa17.55■□□□□ 0.4
PHF3-209ENST00000509330 GOLGA8BA8MQT2 603 aa17.55■□□□□ 0.4
PHF3-209ENST00000509330 MCM5P33992 734 aa17.55■□□□□ 0.4
PHF3-209ENST00000509330 CYB5R4Q7L1T6 521 aa17.55■□□□□ 0.4
PHF3-209ENST00000509330 MB21D2Q8IYB1 491 aaPredicted RBP17.55■□□□□ 0.4
PHF3-209ENST00000509330 IFNL3Q8IZI9 196 aa17.55■□□□□ 0.4
PHF3-209ENST00000509330 CNBD1Q8NA66 436 aa17.55■□□□□ 0.4
PHF3-209ENST00000509330 NSUN7Q8NE18 718 aaKnown RBP17.55■□□□□ 0.4
PHF3-209ENST00000509330 NHSQ6T4R5 1651 aa17.55■□□□□ 0.4
PHF3-209ENST00000509330 NEDD4P46934 1319 aa17.55■□□□□ 0.4
PHF3-209ENST00000509330 PFKFB2O60825 505 aa17.55■□□□□ 0.4
PHF3-209ENST00000509330 SLC4A8Q2Y0W8 1093 aa17.55■□□□□ 0.4
PHF3-209ENST00000509330 OTUD7BQ6GQQ9 843 aa17.55■□□□□ 0.4
PHF3-209ENST00000509330 RNF214Q8ND24 703 aa17.54■□□□□ 0.4
PHF3-209ENST00000509330 ZKSCAN3Q9BRR0 538 aa17.54■□□□□ 0.4
PHF3-209ENST00000509330 MYL10Q9BUA6 226 aa17.54■□□□□ 0.4
PHF3-209ENST00000509330 ANKIB1Q9P2G1 1089 aa17.54■□□□□ 0.4
PHF3-209ENST00000509330 ATP6V1DQ9Y5K8 247 aa17.54■□□□□ 0.4
PHF3-209ENST00000509330 COL1A1P02452 1464 aaPredicted RBP17.54■□□□□ 0.4
PHF3-209ENST00000509330 PDCP20941 246 aa17.54■□□□□ 0.4
PHF3-209ENST00000509330 DYNLL1P63167 89 aaKnown RBP17.54■□□□□ 0.4
PHF3-209ENST00000509330 SLC10A5Q5PT55 438 aa17.54■□□□□ 0.4
PHF3-209ENST00000509330 GJB4Q9NTQ9 266 aa17.54■□□□□ 0.4
PHF3-209ENST00000509330 ONECUT3O60422 494 aaPredicted RBP17.53■□□□□ 0.4
PHF3-209ENST00000509330 MINDY4BA8MYZ0 360 aa17.53■□□□□ 0.4
PHF3-209ENST00000509330 MBD3O95983 291 aa17.53■□□□□ 0.4
PHF3-209ENST00000509330 GNL3LQ9NVN8 582 aaKnown RBP17.53■□□□□ 0.4
PHF3-209ENST00000509330 MYH7P12883 1935 aa17.53■□□□□ 0.4
PHF3-209ENST00000509330 UBE4AQ14139 1066 aa17.52■□□□□ 0.4
PHF3-209ENST00000509330 TACC3Q9Y6A5 838 aa17.52■□□□□ 0.4
PHF3-209ENST00000509330 CICQ96RK0 1608 aaPredicted RBP17.52■□□□□ 0.4
PHF3-209ENST00000509330 GSG1L2A8MUP6 293 aa17.52■□□□□ 0.4
PHF3-209ENST00000509330 FTOQ9C0B1 505 aaKnown RBP eCLIP17.52■□□□□ 0.4
PHF3-209ENST00000509330 TM4SF1P30408 202 aa17.52■□□□□ 0.39
PHF3-209ENST00000509330 MICU3Q86XE3 530 aa17.52■□□□□ 0.39
PHF3-209ENST00000509330 SCN7AQ01118 1682 aa17.52■□□□□ 0.39
PHF3-209ENST00000509330 CYP2D7A0A087X1C5 515 aa17.51■□□□□ 0.39
PHF3-209ENST00000509330 PATL2C9JE40 543 aaKnown RBP17.51■□□□□ 0.39
PHF3-209ENST00000509330 TTC6Q86TZ1 520 aa17.51■□□□□ 0.39
PHF3-209ENST00000509330 TICAM2Q86XR7 235 aa17.51■□□□□ 0.39
PHF3-209ENST00000509330 RBSNQ9H1K0 784 aa17.51■□□□□ 0.39
PHF3-209ENST00000509330 PRR5LQ6MZQ0 368 aa17.51■□□□□ 0.39
PHF3-209ENST00000509330 AGXT2Q9BYV1 514 aa17.51■□□□□ 0.39
PHF3-209ENST00000509330 C4BP0C0L5 1744 aa17.5■□□□□ 0.39
PHF3-209ENST00000509330 GYS1P13807 737 aa17.5■□□□□ 0.39
PHF3-209ENST00000509330 PRDX5P30044 214 aa17.5■□□□□ 0.39
PHF3-209ENST00000509330 NFXL1Q6ZNB6 911 aa17.5■□□□□ 0.39
PHF3-209ENST00000509330 KRT85P78386 507 aa17.5■□□□□ 0.39
PHF3-209ENST00000509330 EVX2Q03828 476 aa17.5■□□□□ 0.39
PHF3-209ENST00000509330 ZNF804BA4D1E1 1349 aa17.5■□□□□ 0.39
PHF3-209ENST00000509330 CARMIL3Q8ND23 1372 aa17.5■□□□□ 0.39
PHF3-209ENST00000509330 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.49■□□□□ 0.39
PHF3-209ENST00000509330 CPLX1O14810 134 aa17.49■□□□□ 0.39
PHF3-209ENST00000509330 HIBADHP31937 336 aaKnown RBP17.49■□□□□ 0.39
PHF3-209ENST00000509330 NASPP49321 788 aaPredicted RBP17.49■□□□□ 0.39
PHF3-209ENST00000509330 ZNF384Q8TF68 577 aa17.49■□□□□ 0.39
PHF3-209ENST00000509330 MAGEB6P1A0A0J9YX57 407 aa17.49■□□□□ 0.39
PHF3-209ENST00000509330 ADD1P35611 737 aaKnown RBP17.49■□□□□ 0.39
PHF3-209ENST00000509330 LAMB2P55268 1798 aa17.49■□□□□ 0.39
PHF3-209ENST00000509330 ZNF445P59923 1031 aa17.49■□□□□ 0.39
PHF3-209ENST00000509330 NAA16Q6N069 864 aaPredicted RBP17.49■□□□□ 0.39
PHF3-209ENST00000509330 PROM2Q8N271 834 aa17.49■□□□□ 0.39
PHF3-209ENST00000509330 SMARCC2Q8TAQ2 1214 aa17.49■□□□□ 0.39
PHF3-209ENST00000509330 HPS5Q9UPZ3 1129 aa17.49■□□□□ 0.39
PHF3-209ENST00000509330 PRDM1O75626 825 aa17.48■□□□□ 0.39
PHF3-209ENST00000509330 SERPINB2P05120 415 aa17.48■□□□□ 0.39
PHF3-209ENST00000509330 RPGRQ92834 1020 aaKnown RBP17.48■□□□□ 0.39
PHF3-209ENST00000509330 ZNF274Q96GC6 653 aaPredicted RBP17.48■□□□□ 0.39
PHF3-209ENST00000509330 AATFQ9NY61 560 aaKnown RBP eCLIP17.48■□□□□ 0.39
PHF3-209ENST00000509330 SBF2Q86WG5 1849 aa17.48■□□□□ 0.39
PHF3-209ENST00000509330 FDPSP14324 419 aaKnown RBP17.48■□□□□ 0.39
PHF3-209ENST00000509330 UBE2HP62256 183 aa17.48■□□□□ 0.39
PHF3-209ENST00000509330 TXNRD1Q16881 649 aa17.48■□□□□ 0.39
PHF3-209ENST00000509330 CCDC82Q8N4S0 544 aa17.48■□□□□ 0.39
PHF3-209ENST00000509330 ZSWIM5Q9P217 1185 aa17.48■□□□□ 0.39
PHF3-209ENST00000509330 TMEM67Q5HYA8 995 aa17.47■□□□□ 0.39
PHF3-209ENST00000509330 SPATA32Q96LK8 384 aa17.47■□□□□ 0.39
PHF3-209ENST00000509330 AIFM3Q96NN9 605 aa17.47■□□□□ 0.39
PHF3-209ENST00000509330 NACAP1Q9BZK3 213 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms