RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 CDPF1Q6NVV7 123 aa7.59□□□□□ -1.19
PDLIM5-211ENST00000508531 FBLIM1Q8WUP2 373 aa7.59□□□□□ -1.19
PDLIM5-211ENST00000508531 ARID3AQ99856 593 aa7.59□□□□□ -1.19
PDLIM5-211ENST00000508531 OAS3Q9Y6K5 1087 aaKnown RBP7.59□□□□□ -1.19
PDLIM5-211ENST00000508531 MAOBP27338 520 aa7.58□□□□□ -1.2
PDLIM5-211ENST00000508531 SOX4Q06945 474 aaPredicted RBP7.58□□□□□ -1.2
PDLIM5-211ENST00000508531 DTX1Q86Y01 620 aa7.58□□□□□ -1.2
PDLIM5-211ENST00000508531 C2CD4AQ8NCU7 369 aaPredicted RBP7.58□□□□□ -1.2
PDLIM5-211ENST00000508531 NPHS2Q9NP85 383 aa7.58□□□□□ -1.2
PDLIM5-211ENST00000508531 FAM95CA0A1B0GW59 222 aa7.57□□□□□ -1.2
PDLIM5-211ENST00000508531 F13BP05160 661 aa7.57□□□□□ -1.2
PDLIM5-211ENST00000508531 NEFLP07196 543 aa7.57□□□□□ -1.2
PDLIM5-211ENST00000508531 IRAK1P51617 712 aa7.57□□□□□ -1.2
PDLIM5-211ENST00000508531 POU4F3Q15319 338 aa7.57□□□□□ -1.2
PDLIM5-211ENST00000508531 SHISA5Q8N114 240 aa7.57□□□□□ -1.2
PDLIM5-211ENST00000508531 FAM129BQ96TA1 746 aa7.57□□□□□ -1.2
PDLIM5-211ENST00000508531 EHD4Q9H223 541 aa7.57□□□□□ -1.2
PDLIM5-211ENST00000508531 ATG3Q9NT62 314 aa7.57□□□□□ -1.2
PDLIM5-211ENST00000508531 PIM2Q9P1W9 311 aa7.57□□□□□ -1.2
PDLIM5-211ENST00000508531 CPNE3O75131 537 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-211ENST00000508531 ADH5P11766 374 aa7.56□□□□□ -1.2
PDLIM5-211ENST00000508531 PDE3BQ13370 1112 aa7.56□□□□□ -1.2
PDLIM5-211ENST00000508531 KIAA0319Q5VV43 1072 aa7.56□□□□□ -1.2
PDLIM5-211ENST00000508531 PAOXQ6QHF9 649 aa7.56□□□□□ -1.2
PDLIM5-211ENST00000508531 GIMAP7Q8NHV1 300 aa7.56□□□□□ -1.2
PDLIM5-211ENST00000508531 OSBPL1AQ9BXW6 950 aa7.56□□□□□ -1.2
PDLIM5-211ENST00000508531 COL17A1Q9UMD9 1497 aaPredicted RBP7.55□□□□□ -1.2
PDLIM5-211ENST00000508531 EIF4EBP3O60516 100 aaPredicted RBP7.55□□□□□ -1.2
PDLIM5-211ENST00000508531 ECEL1O95672 775 aa7.55□□□□□ -1.2
PDLIM5-211ENST00000508531 CYP11A1P05108 521 aa7.55□□□□□ -1.2
PDLIM5-211ENST00000508531 TXNDC2Q86VQ3 553 aa7.55□□□□□ -1.2
PDLIM5-211ENST00000508531 TMC1Q8TDI8 760 aa7.55□□□□□ -1.2
PDLIM5-211ENST00000508531 TRIM56Q9BRZ2 755 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-211ENST00000508531 ZNF576Q9H609 170 aa7.55□□□□□ -1.2
PDLIM5-211ENST00000508531 LEMD3Q9Y2U8 911 aa7.55□□□□□ -1.2
PDLIM5-211ENST00000508531 ACTL7BQ9Y614 415 aa7.55□□□□□ -1.2
PDLIM5-211ENST00000508531 GPR182O15218 404 aa7.54□□□□□ -1.2
PDLIM5-211ENST00000508531 WNT11O96014 354 aa7.54□□□□□ -1.2
PDLIM5-211ENST00000508531 B3GALT4O96024 378 aa7.54□□□□□ -1.2
PDLIM5-211ENST00000508531 AKAP4Q5JQC9 854 aa7.54□□□□□ -1.2
PDLIM5-211ENST00000508531 RETREG2Q8NC44 543 aa7.54□□□□□ -1.2
PDLIM5-211ENST00000508531 CORO1BQ9BR76 489 aa7.54□□□□□ -1.2
PDLIM5-211ENST00000508531 YIPF2Q9BWQ6 316 aa7.54□□□□□ -1.2
PDLIM5-211ENST00000508531 NIF3L1Q9GZT8 377 aa7.54□□□□□ -1.2
PDLIM5-211ENST00000508531 RAB6AP20340 208 aa7.53□□□□□ -1.2
PDLIM5-211ENST00000508531 ITPKAP23677 461 aa7.53□□□□□ -1.2
PDLIM5-211ENST00000508531 ADMP35318 185 aa7.53□□□□□ -1.2
PDLIM5-211ENST00000508531 DYMQ7RTS9 669 aa7.53□□□□□ -1.2
PDLIM5-211ENST00000508531 EZH1Q92800 747 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-211ENST00000508531 TBC1D32Q96NH3 1257 aa7.53□□□□□ -1.2
PDLIM5-211ENST00000508531 KRTAP4-12Q9BQ66 201 aa7.53□□□□□ -1.2
PDLIM5-211ENST00000508531 RAD18Q9NS91 495 aa7.53□□□□□ -1.2
PDLIM5-211ENST00000508531 PRKAG2Q9UGJ0 569 aa7.53□□□□□ -1.2
PDLIM5-211ENST00000508531 CECR2Q9BXF3 1484 aa7.52□□□□□ -1.21
PDLIM5-211ENST00000508531 EIF1AYO14602 144 aaKnown RBP7.52□□□□□ -1.21
PDLIM5-211ENST00000508531 GADD45BO75293 160 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-211ENST00000508531 TAL1P17542 331 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-211ENST00000508531 HP1BP3Q5SSJ5 553 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-211ENST00000508531 ZAR1Q86SH2 424 aa7.52□□□□□ -1.21
PDLIM5-211ENST00000508531 DDX54Q8TDD1 881 aaKnown RBP7.52□□□□□ -1.21
PDLIM5-211ENST00000508531 CCDC74AQ96AQ1 378 aa7.52□□□□□ -1.21
PDLIM5-211ENST00000508531 CITED4Q96RK1 184 aa7.52□□□□□ -1.21
PDLIM5-211ENST00000508531 ABCB6Q9NP58 842 aa7.52□□□□□ -1.21
PDLIM5-211ENST00000508531 AP4E1Q9UPM8 1137 aa7.52□□□□□ -1.21
PDLIM5-211ENST00000508531 SUPT5HO00267 1087 aaKnown RBP7.51□□□□□ -1.21
PDLIM5-211ENST00000508531 IGHA2P01877 340 aa7.51□□□□□ -1.21
PDLIM5-211ENST00000508531 NFICP08651 508 aa7.51□□□□□ -1.21
PDLIM5-211ENST00000508531 FOSL1P15407 271 aa7.51□□□□□ -1.21
PDLIM5-211ENST00000508531 ZFYVE1Q9HBF4 777 aa7.51□□□□□ -1.21
PDLIM5-211ENST00000508531 FAM170BA6NMN3 283 aa7.5□□□□□ -1.21
PDLIM5-211ENST00000508531 PAX4O43316 350 aa7.5□□□□□ -1.21
PDLIM5-211ENST00000508531 ZNF157P51786 506 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-211ENST00000508531 PDE3AQ14432 1141 aa7.5□□□□□ -1.21
PDLIM5-211ENST00000508531 CPSF6Q16630 551 aaKnown RBP eCLIP7.5□□□□□ -1.21
PDLIM5-211ENST00000508531 MSMPQ1L6U9 139 aa7.5□□□□□ -1.21
PDLIM5-211ENST00000508531 METTL22Q9BUU2 404 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-211ENST00000508531 DNAJC25Q9H1X3 360 aa7.5□□□□□ -1.21
PDLIM5-211ENST00000508531 SEMA6CQ9H3T2 930 aa7.5□□□□□ -1.21
PDLIM5-211ENST00000508531 FAM105AQ9NUU6 356 aa7.5□□□□□ -1.21
PDLIM5-211ENST00000508531 ASPAP45381 313 aa7.49□□□□□ -1.21
PDLIM5-211ENST00000508531 PTPN12Q05209 780 aaKnown RBP7.49□□□□□ -1.21
PDLIM5-211ENST00000508531 MAP7Q14244 749 aa7.49□□□□□ -1.21
PDLIM5-211ENST00000508531 PRPF40BQ6NWY9 871 aaKnown RBP7.49□□□□□ -1.21
PDLIM5-211ENST00000508531 KRTAP1-3Q8IUG1 177 aa7.49□□□□□ -1.21
PDLIM5-211ENST00000508531 CCER1Q8TC90 406 aaPredicted RBP7.49□□□□□ -1.21
PDLIM5-211ENST00000508531 GATA6Q92908 595 aa7.49□□□□□ -1.21
PDLIM5-211ENST00000508531 CSRNP1Q96S65 589 aa7.49□□□□□ -1.21
PDLIM5-211ENST00000508531 ACSS3Q9H6R3 686 aa7.49□□□□□ -1.21
PDLIM5-211ENST00000508531 ANGEL1Q9UNK9 670 aaKnown RBP7.49□□□□□ -1.21
PDLIM5-211ENST00000508531 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.48□□□□□ -1.21
PDLIM5-211ENST00000508531 TMEM238LA0A1B0GVL6 79 aa7.48□□□□□ -1.21
PDLIM5-211ENST00000508531 CYP26A1O43174 497 aa7.48□□□□□ -1.21
PDLIM5-211ENST00000508531 AOC2O75106 756 aa7.48□□□□□ -1.21
PDLIM5-211ENST00000508531 AP3B2Q13367 1082 aa7.48□□□□□ -1.21
PDLIM5-211ENST00000508531 GLIS3Q8NEA6 775 aa7.48□□□□□ -1.21
PDLIM5-211ENST00000508531 EPS8L3Q8TE67 593 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-211ENST00000508531 WDR18Q9BV38 432 aa7.48□□□□□ -1.21
PDLIM5-211ENST00000508531 FAAP100Q0VG06 881 aa7.47□□□□□ -1.21
PDLIM5-211ENST00000508531 GRM2Q14416 872 aa7.47□□□□□ -1.21
PDLIM5-211ENST00000508531 DMRTB1Q96MA1 342 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms