RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 ECEL1O95672 775 aa9.17□□□□□ -0.94
DHFR-204ENST00000508282 CTSBP07858 339 aa9.17□□□□□ -0.94
DHFR-204ENST00000508282 XRCC5P13010 732 aaKnown RBP9.17□□□□□ -0.94
DHFR-204ENST00000508282 ZNF157P51786 506 aaPredicted RBP9.17□□□□□ -0.94
DHFR-204ENST00000508282 COL19A1Q14993 1142 aa9.17□□□□□ -0.94
DHFR-204ENST00000508282 ANKRD34AQ69YU3 496 aa9.17□□□□□ -0.94
DHFR-204ENST00000508282 PRR23CQ6ZRP0 262 aa9.17□□□□□ -0.94
DHFR-204ENST00000508282 C3orf58Q8NDZ4 430 aa9.17□□□□□ -0.94
DHFR-204ENST00000508282 CYP11A1P05108 521 aa9.16□□□□□ -0.94
DHFR-204ENST00000508282 PREPP48147 710 aa9.16□□□□□ -0.94
DHFR-204ENST00000508282 POU4F3Q15319 338 aa9.16□□□□□ -0.94
DHFR-204ENST00000508282 NPAS4Q8IUM7 802 aa9.16□□□□□ -0.94
DHFR-204ENST00000508282 DDX54Q8TDD1 881 aaKnown RBP9.16□□□□□ -0.94
DHFR-204ENST00000508282 ZFYVE1Q9HBF4 777 aa9.16□□□□□ -0.94
DHFR-204ENST00000508282 EXOSC6Q5RKV6 272 aaKnown RBP9.15□□□□□ -0.94
DHFR-204ENST00000508282 NUTM2GQ5VZR2 741 aa9.15□□□□□ -0.94
DHFR-204ENST00000508282 FDX2Q6P4F2 183 aa9.15□□□□□ -0.94
DHFR-204ENST00000508282 SMG8Q8ND04 991 aaKnown RBP9.15□□□□□ -0.94
DHFR-204ENST00000508282 UTP4Q969X6 686 aaKnown RBP9.15□□□□□ -0.94
DHFR-204ENST00000508282 SUGCTQ9HAC7 445 aa9.15□□□□□ -0.94
DHFR-204ENST00000508282 AKAP2Q9Y2D5 859 aa9.15□□□□□ -0.94
DHFR-204ENST00000508282 GIPC1O14908 333 aa9.14□□□□□ -0.95
DHFR-204ENST00000508282 CCDC27Q2M243 656 aa9.14□□□□□ -0.95
DHFR-204ENST00000508282 UVSSAQ2YD98 709 aa9.14□□□□□ -0.95
DHFR-204ENST00000508282 EAPPQ56P03 285 aaPredicted RBP9.14□□□□□ -0.95
DHFR-204ENST00000508282 PRSS36Q5K4E3 855 aa9.14□□□□□ -0.95
DHFR-204ENST00000508282 HOMEZQ8IX15 550 aa9.14□□□□□ -0.95
DHFR-204ENST00000508282 SRCIN1Q9C0H9 1055 aa9.14□□□□□ -0.95
DHFR-204ENST00000508282 RNF19AQ9NV58 838 aa9.14□□□□□ -0.95
DHFR-204ENST00000508282 SPG7Q9UQ90 795 aa9.14□□□□□ -0.95
DHFR-204ENST00000508282 PRPF40AO75400 957 aaKnown RBP9.13□□□□□ -0.95
DHFR-204ENST00000508282 TIAF1O95411 115 aa9.13□□□□□ -0.95
DHFR-204ENST00000508282 GSTT1P30711 240 aa9.13□□□□□ -0.95
DHFR-204ENST00000508282 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.13□□□□□ -0.95
DHFR-204ENST00000508282 MYRFLQ96LU7 910 aa9.13□□□□□ -0.95
DHFR-204ENST00000508282 CORO1BQ9BR76 489 aa9.13□□□□□ -0.95
DHFR-204ENST00000508282 C12orf49Q9H741 205 aa9.13□□□□□ -0.95
DHFR-204ENST00000508282 GPN3Q9UHW5 284 aaPredicted RBP9.13□□□□□ -0.95
DHFR-204ENST00000508282 SART1O43290 800 aaKnown RBP9.12□□□□□ -0.95
DHFR-204ENST00000508282 AP3B2Q13367 1082 aa9.12□□□□□ -0.95
DHFR-204ENST00000508282 C12orf50Q8NA57 414 aaPredicted RBP9.12□□□□□ -0.95
DHFR-204ENST00000508282 CYP4F12Q9HCS2 524 aa9.12□□□□□ -0.95
DHFR-204ENST00000508282 TMEM39AQ9NV64 488 aa9.12□□□□□ -0.95
DHFR-204ENST00000508282 DHX15O43143 795 aaKnown RBP9.11□□□□□ -0.95
DHFR-204ENST00000508282 DRD2P14416 443 aa9.11□□□□□ -0.95
DHFR-204ENST00000508282 GNA15P30679 374 aa9.11□□□□□ -0.95
DHFR-204ENST00000508282 DUSP9Q99956 384 aaKnown RBP9.11□□□□□ -0.95
DHFR-204ENST00000508282 RAXQ9Y2V3 346 aa9.11□□□□□ -0.95
DHFR-204ENST00000508282 PPP2R3AQ06190 1150 aa9.1□□□□□ -0.95
DHFR-204ENST00000508282 FBXO33Q7Z6M2 555 aa9.1□□□□□ -0.95
DHFR-204ENST00000508282 FAM20CQ8IXL6 584 aa9.1□□□□□ -0.95
DHFR-204ENST00000508282 FRMD6Q96NE9 622 aa9.1□□□□□ -0.95
DHFR-204ENST00000508282 FAM8A1Q9UBU6 413 aa9.1□□□□□ -0.95
DHFR-204ENST00000508282 USP17L7P0C7H9 530 aa9.09□□□□□ -0.95
DHFR-204ENST00000508282 BMP3P12645 472 aa9.09□□□□□ -0.95
DHFR-204ENST00000508282 SOX4Q06945 474 aaPredicted RBP9.09□□□□□ -0.95
DHFR-204ENST00000508282 HP1BP3Q5SSJ5 553 aaPredicted RBP9.09□□□□□ -0.95
DHFR-204ENST00000508282 STK35Q8TDR2 534 aa9.09□□□□□ -0.95
DHFR-204ENST00000508282 NECAB3Q96P71 396 aaPredicted RBP9.09□□□□□ -0.95
DHFR-204ENST00000508282 STOML1Q9UBI4 398 aa9.09□□□□□ -0.95
DHFR-204ENST00000508282 FBXO24O75426 580 aa9.08□□□□□ -0.96
DHFR-204ENST00000508282 ADH5P11766 374 aa9.08□□□□□ -0.96
DHFR-204ENST00000508282 TPTE2Q6XPS3 522 aa9.08□□□□□ -0.96
DHFR-204ENST00000508282 PDZD3Q86UT5 571 aa9.08□□□□□ -0.96
DHFR-204ENST00000508282 SULF2Q8IWU5 870 aa9.08□□□□□ -0.96
DHFR-204ENST00000508282 C2CD4AQ8NCU7 369 aaPredicted RBP9.08□□□□□ -0.96
DHFR-204ENST00000508282 ZC3H12CQ9C0D7 883 aaKnown RBP9.08□□□□□ -0.96
DHFR-204ENST00000508282 CCDC86Q9H6F5 360 aaKnown RBP9.08□□□□□ -0.96
DHFR-204ENST00000508282 PPM1HQ9ULR3 514 aa9.08□□□□□ -0.96
DHFR-204ENST00000508282 HIF3AQ9Y2N7 669 aa9.08□□□□□ -0.96
DHFR-204ENST00000508282 GAS2O43903 313 aaKnown RBP9.07□□□□□ -0.96
DHFR-204ENST00000508282 GSTP1P09211 210 aaKnown RBP9.07□□□□□ -0.96
DHFR-204ENST00000508282 FSTP19883 344 aa9.07□□□□□ -0.96
DHFR-204ENST00000508282 FGD1P98174 961 aa9.07□□□□□ -0.96
DHFR-204ENST00000508282 PDE3AQ14432 1141 aa9.07□□□□□ -0.96
DHFR-204ENST00000508282 SGO2Q562F6 1265 aa9.07□□□□□ -0.96
DHFR-204ENST00000508282 ANKRD24Q8TF21 1146 aa9.07□□□□□ -0.96
DHFR-204ENST00000508282 WDR89Q96FK6 387 aaPredicted RBP9.07□□□□□ -0.96
DHFR-204ENST00000508282 WDR18Q9BV38 432 aa9.07□□□□□ -0.96
DHFR-204ENST00000508282 C7orf69Q9H7B7 122 aa9.07□□□□□ -0.96
DHFR-204ENST00000508282 ZBTB7CA1YPR0 619 aa9.06□□□□□ -0.96
DHFR-204ENST00000508282 HMX2A2RU54 273 aa9.06□□□□□ -0.96
DHFR-204ENST00000508282 ENC1O14682 589 aa9.06□□□□□ -0.96
DHFR-204ENST00000508282 AOC2O75106 756 aa9.06□□□□□ -0.96
DHFR-204ENST00000508282 EIF4BP23588 611 aaKnown RBP9.06□□□□□ -0.96
DHFR-204ENST00000508282 TAGLNQ01995 201 aaKnown RBP9.06□□□□□ -0.96
DHFR-204ENST00000508282 AKAP4Q5JQC9 854 aa9.06□□□□□ -0.96
DHFR-204ENST00000508282 BEND4Q6ZU67 534 aa9.06□□□□□ -0.96
DHFR-204ENST00000508282 TRIM42Q8IWZ5 723 aa9.06□□□□□ -0.96
DHFR-204ENST00000508282 FAM83CQ9BQN1 747 aa9.06□□□□□ -0.96
DHFR-204ENST00000508282 KCNF1Q9H3M0 494 aa9.06□□□□□ -0.96
DHFR-204ENST00000508282 RAD18Q9NS91 495 aa9.06□□□□□ -0.96
DHFR-204ENST00000508282 PARP2Q9UGN5 583 aa9.06□□□□□ -0.96
DHFR-204ENST00000508282 AK5Q9Y6K8 562 aa9.06□□□□□ -0.96
DHFR-204ENST00000508282 ZNF862O60290 1169 aa9.05□□□□□ -0.96
DHFR-204ENST00000508282 PAGE1O75459 146 aa9.05□□□□□ -0.96
DHFR-204ENST00000508282 LIG1P18858 919 aa9.05□□□□□ -0.96
DHFR-204ENST00000508282 ERCC3P19447 782 aa9.05□□□□□ -0.96
DHFR-204ENST00000508282 NME2P22392 152 aa9.05□□□□□ -0.96
DHFR-204ENST00000508282 ARNTP27540 789 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms