RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 LINC00301Q8NCQ3 95 aa12.75□□□□□ -0.37
LIN54-207ENST00000508171 AIFM3Q96NN9 605 aa12.75□□□□□ -0.37
LIN54-207ENST00000508171 WWC3Q9ULE0 1092 aa12.75□□□□□ -0.37
LIN54-207ENST00000508171 BCL9O00512 1426 aa12.75□□□□□ -0.37
LIN54-207ENST00000508171 ABCC12Q96J65 1359 aa12.75□□□□□ -0.37
LIN54-207ENST00000508171 DHX16O60231 1041 aaKnown RBP12.75□□□□□ -0.37
LIN54-207ENST00000508171 PDE8AO60658 829 aa12.75□□□□□ -0.37
LIN54-207ENST00000508171 NDUFA8P51970 172 aa12.75□□□□□ -0.37
LIN54-207ENST00000508171 CCDC144BQ3MJ40 725 aa12.75□□□□□ -0.37
LIN54-207ENST00000508171 ADALQ6DHV7 355 aa12.75□□□□□ -0.37
LIN54-207ENST00000508171 DZIP3Q86Y13 1208 aaKnown RBP12.75□□□□□ -0.37
LIN54-207ENST00000508171 CCDC144CPQ8IYA2 1237 aa12.75□□□□□ -0.37
LIN54-207ENST00000508171 GOLGA6L19H0YKK7 550 aa12.75□□□□□ -0.37
LIN54-207ENST00000508171 STX1AQ16623 288 aa12.75□□□□□ -0.37
LIN54-207ENST00000508171 FMR1NBQ8N0W7 255 aaPredicted RBP12.75□□□□□ -0.37
LIN54-207ENST00000508171 CHMP4CQ96CF2 233 aa12.75□□□□□ -0.37
LIN54-207ENST00000508171 PRIMPOLQ96LW4 560 aa12.75□□□□□ -0.37
LIN54-207ENST00000508171 CLIP2Q9UDT6 1046 aa12.75□□□□□ -0.37
LIN54-207ENST00000508171 DDX60Q8IY21 1712 aaKnown RBP12.74□□□□□ -0.37
LIN54-207ENST00000508171 B4E1Z4 1266 aa12.74□□□□□ -0.37
LIN54-207ENST00000508171 ZSCAN25Q6NSZ9 544 aa12.74□□□□□ -0.37
LIN54-207ENST00000508171 ZNF512BQ96KM6 892 aaPredicted RBP12.74□□□□□ -0.37
LIN54-207ENST00000508171 ANKRD36CQ5JPF3 1778 aa12.74□□□□□ -0.37
LIN54-207ENST00000508171 CAVIN2O95810 425 aa12.74□□□□□ -0.37
LIN54-207ENST00000508171 PDE6AP16499 860 aa12.74□□□□□ -0.37
LIN54-207ENST00000508171 TRDNQ13061 729 aa12.74□□□□□ -0.37
LIN54-207ENST00000508171 STK38Q15208 465 aa12.74□□□□□ -0.37
LIN54-207ENST00000508171 TTF1Q15361 905 aaPredicted RBP12.74□□□□□ -0.37
LIN54-207ENST00000508171 SF3A1Q15459 793 aaKnown RBP12.74□□□□□ -0.37
LIN54-207ENST00000508171 MYSM1Q5VVJ2 828 aa12.74□□□□□ -0.37
LIN54-207ENST00000508171 DHX40Q8IX18 779 aaKnown RBP12.74□□□□□ -0.37
LIN54-207ENST00000508171 CACTINQ8WUQ7 758 aaKnown RBP12.74□□□□□ -0.37
LIN54-207ENST00000508171 MRPS27Q92552 414 aaKnown RBP12.74□□□□□ -0.37
LIN54-207ENST00000508171 SDF4Q9BRK5 362 aa12.74□□□□□ -0.37
LIN54-207ENST00000508171 LRP6O75581 1613 aa12.73□□□□□ -0.37
LIN54-207ENST00000508171 TCRBV5S4A2TA0A5A2 114 aa12.73□□□□□ -0.37
LIN54-207ENST00000508171 UBE3CQ15386 1083 aa12.73□□□□□ -0.37
LIN54-207ENST00000508171 ANGEL1Q9UNK9 670 aaKnown RBP12.73□□□□□ -0.37
LIN54-207ENST00000508171 EXOC5O00471 708 aa12.73□□□□□ -0.37
LIN54-207ENST00000508171 ARID5BQ14865 1188 aa12.73□□□□□ -0.37
LIN54-207ENST00000508171 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.73□□□□□ -0.37
LIN54-207ENST00000508171 ZNF34Q8IZ26 560 aa12.73□□□□□ -0.37
LIN54-207ENST00000508171 PHKBQ93100 1093 aa12.73□□□□□ -0.37
LIN54-207ENST00000508171 C4AP0C0L4 1744 aa12.72□□□□□ -0.37
LIN54-207ENST00000508171 C4BP0C0L5 1744 aa12.72□□□□□ -0.37
LIN54-207ENST00000508171 BECN2A8MW95 431 aa12.72□□□□□ -0.37
LIN54-207ENST00000508171 SPTLC2O15270 562 aa12.72□□□□□ -0.37
LIN54-207ENST00000508171 ARID4AP29374 1257 aaPredicted RBP12.72□□□□□ -0.37
LIN54-207ENST00000508171 CDC27P30260 824 aa12.72□□□□□ -0.37
LIN54-207ENST00000508171 KIF23Q02241 960 aaPredicted RBP12.72□□□□□ -0.37
LIN54-207ENST00000508171 STRBPQ96SI9 672 aaKnown RBP12.72□□□□□ -0.37
LIN54-207ENST00000508171 SEC31BQ9NQW1 1179 aa12.72□□□□□ -0.37
LIN54-207ENST00000508171 POLR3EQ9NVU0 708 aa12.72□□□□□ -0.37
LIN54-207ENST00000508171 SLIT2O94813 1529 aa12.72□□□□□ -0.37
LIN54-207ENST00000508171 NEDD4P46934 1319 aa12.72□□□□□ -0.37
LIN54-207ENST00000508171 UBE2Q2LH0YL09 131 aa12.72□□□□□ -0.37
LIN54-207ENST00000508171 SUSD4Q5VX71 490 aa12.72□□□□□ -0.37
LIN54-207ENST00000508171 SYNE3Q6ZMZ3 975 aa12.72□□□□□ -0.37
LIN54-207ENST00000508171 ARID3AQ99856 593 aa12.72□□□□□ -0.37
LIN54-207ENST00000508171 MYL10Q9BUA6 226 aa12.72□□□□□ -0.37
LIN54-207ENST00000508171 ANO10Q9NW15 660 aa12.72□□□□□ -0.37
LIN54-207ENST00000508171 WDR19Q8NEZ3 1342 aa12.71□□□□□ -0.37
LIN54-207ENST00000508171 A0A0G2JS52 829 aa12.71□□□□□ -0.37
LIN54-207ENST00000508171 A0A1W2PQ27 194 aa12.71□□□□□ -0.37
LIN54-207ENST00000508171 A0A1W2PQ64 194 aa12.71□□□□□ -0.37
LIN54-207ENST00000508171 A0A1W2PQD8 194 aa12.71□□□□□ -0.37
LIN54-207ENST00000508171 ERVV-1B6SEH8 477 aa12.71□□□□□ -0.37
LIN54-207ENST00000508171 SH2B2O14492 632 aaPredicted RBP12.71□□□□□ -0.37
LIN54-207ENST00000508171 FGFR2P21802 821 aa12.71□□□□□ -0.37
LIN54-207ENST00000508171 MARCKSP29966 332 aaPredicted RBP12.71□□□□□ -0.37
LIN54-207ENST00000508171 IL6STP40189 918 aaPredicted RBP12.71□□□□□ -0.37
LIN54-207ENST00000508171 METAP2P50579 478 aaKnown RBP eCLIP12.71□□□□□ -0.37
LIN54-207ENST00000508171 PUM3Q15397 648 aaKnown RBP12.71□□□□□ -0.37
LIN54-207ENST00000508171 APOA5Q6Q788 366 aa12.71□□□□□ -0.37
LIN54-207ENST00000508171 MICU3Q86XE3 530 aa12.71□□□□□ -0.37
LIN54-207ENST00000508171 SPATA5Q8NB90 893 aa12.71□□□□□ -0.37
LIN54-207ENST00000508171 IGDCC4Q8TDY8 1250 aa12.71□□□□□ -0.37
LIN54-207ENST00000508171 LPIN2Q92539 896 aa12.71□□□□□ -0.37
LIN54-207ENST00000508171 AIDAQ96BJ3 306 aa12.71□□□□□ -0.37
LIN54-207ENST00000508171 TACC3Q9Y6A5 838 aa12.71□□□□□ -0.37
LIN54-207ENST00000508171 DISP2A7MBM2 1401 aa12.71□□□□□ -0.38
LIN54-207ENST00000508171 NHSL1Q5SYE7 1610 aa12.71□□□□□ -0.38
LIN54-207ENST00000508171 CTDSPL2Q05D32 466 aa12.71□□□□□ -0.38
LIN54-207ENST00000508171 RASGRF1Q13972 1273 aa12.71□□□□□ -0.38
LIN54-207ENST00000508171 ANO1Q5XXA6 986 aa12.71□□□□□ -0.38
LIN54-207ENST00000508171 SARM1Q6SZW1 724 aa12.71□□□□□ -0.38
LIN54-207ENST00000508171 BRAPQ7Z569 592 aa12.71□□□□□ -0.38
LIN54-207ENST00000508171 AOPEPQ8N6M6 819 aa12.71□□□□□ -0.38
LIN54-207ENST00000508171 MAGEB6Q8N7X4 407 aa12.71□□□□□ -0.38
LIN54-207ENST00000508171 KCNG4Q8TDN1 519 aa12.71□□□□□ -0.38
LIN54-207ENST00000508171 ALG1Q9BT22 464 aa12.71□□□□□ -0.38
LIN54-207ENST00000508171 ZMYM6O95789 1325 aa12.7□□□□□ -0.38
LIN54-207ENST00000508171 WDHD1O75717 1129 aaPredicted RBP12.7□□□□□ -0.38
LIN54-207ENST00000508171 YEATS4O95619 227 aa12.7□□□□□ -0.38
LIN54-207ENST00000508171 GTF2F1P35269 517 aaKnown RBP eCLIP12.7□□□□□ -0.387e-6■■■■□ 21.3
LIN54-207ENST00000508171 AXDND1Q5T1B0 1012 aaPredicted RBP12.7□□□□□ -0.38
LIN54-207ENST00000508171 KIAA1468Q9P260 1216 aa12.7□□□□□ -0.38
LIN54-207ENST00000508171 ATRNO75882 1429 aa12.7□□□□□ -0.38
LIN54-207ENST00000508171 BIN1O00499 593 aa12.7□□□□□ -0.38
LIN54-207ENST00000508171 RIOK3O14730 519 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms