RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 LRRC4BQ9NT99 713 aa10.39□□□□□ -0.75
COL6A4P1-204ENST00000508169 PPP1R1BQ9UD71 204 aaPredicted RBP10.39□□□□□ -0.75
COL6A4P1-204ENST00000508169 PRKAG2Q9UGJ0 569 aa10.39□□□□□ -0.75
COL6A4P1-204ENST00000508169 SUPT16HQ9Y5B9 1047 aaKnown RBP10.39□□□□□ -0.75
COL6A4P1-204ENST00000508169 TFE3P19532 575 aaPredicted RBP10.38□□□□□ -0.75
COL6A4P1-204ENST00000508169 AMPD1P23109 780 aa10.38□□□□□ -0.75
COL6A4P1-204ENST00000508169 FAM117BQ6P1L5 589 aa10.38□□□□□ -0.75
COL6A4P1-204ENST00000508169 FBXL19Q6PCT2 694 aa10.38□□□□□ -0.75
COL6A4P1-204ENST00000508169 WFDC8Q8IUA0 241 aa10.38□□□□□ -0.75
COL6A4P1-204ENST00000508169 GMLQ99445 158 aa10.38□□□□□ -0.75
COL6A4P1-204ENST00000508169 SOX17Q9H6I2 414 aaPredicted RBP10.38□□□□□ -0.75
COL6A4P1-204ENST00000508169 KCNQ5Q9NR82 932 aa10.38□□□□□ -0.75
COL6A4P1-204ENST00000508169 SHISA8B8ZZ34 492 aa10.37□□□□□ -0.75
COL6A4P1-204ENST00000508169 LINC01387J3KSC0 135 aa10.37□□□□□ -0.75
COL6A4P1-204ENST00000508169 BMP6P22004 513 aa10.37□□□□□ -0.75
COL6A4P1-204ENST00000508169 GARTP22102 1010 aa10.37□□□□□ -0.75
COL6A4P1-204ENST00000508169 PIP4K2BP78356 416 aa10.37□□□□□ -0.75
COL6A4P1-204ENST00000508169 TXNDC11Q6PKC3 985 aa10.37□□□□□ -0.75
COL6A4P1-204ENST00000508169 RASGRP4Q8TDF6 673 aa10.37□□□□□ -0.75
COL6A4P1-204ENST00000508169 SLC7A3Q8WY07 619 aa10.37□□□□□ -0.75
COL6A4P1-204ENST00000508169 UBXN4Q92575 508 aa10.37□□□□□ -0.75
COL6A4P1-204ENST00000508169 EMILIN2Q9BXX0 1053 aa10.37□□□□□ -0.75
COL6A4P1-204ENST00000508169 CYP8B1Q9UNU6 501 aa10.37□□□□□ -0.75
COL6A4P1-204ENST00000508169 ARNTP27540 789 aa10.36□□□□□ -0.75
COL6A4P1-204ENST00000508169 GMPRP36959 345 aa10.36□□□□□ -0.75
COL6A4P1-204ENST00000508169 ARL4DP49703 201 aa10.36□□□□□ -0.75
COL6A4P1-204ENST00000508169 AP3B2Q13367 1082 aa10.36□□□□□ -0.75
COL6A4P1-204ENST00000508169 LRRC14Q15048 493 aa10.36□□□□□ -0.75
COL6A4P1-204ENST00000508169 RASIP1Q5U651 963 aa10.36□□□□□ -0.75
COL6A4P1-204ENST00000508169 MSL1Q68DK7 614 aa10.36□□□□□ -0.75
COL6A4P1-204ENST00000508169 TRIM42Q8IWZ5 723 aa10.36□□□□□ -0.75
COL6A4P1-204ENST00000508169 GOLM1Q8NBJ4 401 aa10.36□□□□□ -0.75
COL6A4P1-204ENST00000508169 STK35Q8TDR2 534 aa10.36□□□□□ -0.75
COL6A4P1-204ENST00000508169 WNT8BQ93098 351 aa10.36□□□□□ -0.75
COL6A4P1-204ENST00000508169 CBX8Q9HC52 389 aa10.36□□□□□ -0.75
COL6A4P1-204ENST00000508169 PRDM6Q9NQX0 595 aa10.36□□□□□ -0.75
COL6A4P1-204ENST00000508169 EIF4EBP3O60516 100 aaPredicted RBP10.35□□□□□ -0.75
COL6A4P1-204ENST00000508169 CELA2BP08218 269 aaPredicted RBP10.35□□□□□ -0.75
COL6A4P1-204ENST00000508169 GSTM4Q03013 218 aa10.35□□□□□ -0.75
COL6A4P1-204ENST00000508169 C19orf57Q0VDD7 668 aa10.35□□□□□ -0.75
COL6A4P1-204ENST00000508169 HGSNATQ68CP4 663 aa10.35□□□□□ -0.75
COL6A4P1-204ENST00000508169 LLGL2Q6P1M3 1020 aa10.35□□□□□ -0.75
COL6A4P1-204ENST00000508169 LYPD4Q6UWN0 246 aa10.35□□□□□ -0.75
COL6A4P1-204ENST00000508169 EAF1Q96JC9 268 aaPredicted RBP10.35□□□□□ -0.75
COL6A4P1-204ENST00000508169 SPATA32Q96LK8 384 aa10.35□□□□□ -0.75
COL6A4P1-204ENST00000508169 NT5C1AQ9BXI3 368 aa10.35□□□□□ -0.75
COL6A4P1-204ENST00000508169 MIR1-1HGQ9H1L0 117 aa10.35□□□□□ -0.75
COL6A4P1-204ENST00000508169 PCDHB5Q9Y5E4 795 aa10.35□□□□□ -0.75
COL6A4P1-204ENST00000508169 GREM1O60565 184 aa10.34□□□□□ -0.75
COL6A4P1-204ENST00000508169 ATP2B1P20020 1258 aa10.34□□□□□ -0.75
COL6A4P1-204ENST00000508169 LCE2CQ5TA81 110 aa10.34□□□□□ -0.75
COL6A4P1-204ENST00000508169 OSGEPQ9NPF4 335 aa10.34□□□□□ -0.75
COL6A4P1-204ENST00000508169 FSCN2O14926 492 aa10.33□□□□□ -0.76
COL6A4P1-204ENST00000508169 WFS1O76024 890 aa10.33□□□□□ -0.76
COL6A4P1-204ENST00000508169 ATF4P18848 351 aaPredicted RBP10.33□□□□□ -0.76
COL6A4P1-204ENST00000508169 CCDC84Q86UT8 332 aaPredicted RBP10.33□□□□□ -0.76
COL6A4P1-204ENST00000508169 GRIN3AQ8TCU5 1115 aa10.33□□□□□ -0.76
COL6A4P1-204ENST00000508169 ZNF252P-AS1Q0IIN9 211 aa10.32□□□□□ -0.76
COL6A4P1-204ENST00000508169 SEPT6Q14141 434 aa10.32□□□□□ -0.76
COL6A4P1-204ENST00000508169 FAM196AQ6ZSG2 479 aa10.32□□□□□ -0.76
COL6A4P1-204ENST00000508169 PDZD3Q86UT5 571 aa10.32□□□□□ -0.76
COL6A4P1-204ENST00000508169 CARD10Q9BWT7 1032 aa10.32□□□□□ -0.76
COL6A4P1-204ENST00000508169 UBP1Q9NZI7 540 aa10.32□□□□□ -0.76
COL6A4P1-204ENST00000508169 F13A1P00488 732 aa10.31□□□□□ -0.76
COL6A4P1-204ENST00000508169 CYP11A1P05108 521 aa10.31□□□□□ -0.76
COL6A4P1-204ENST00000508169 GSTP1P09211 210 aaKnown RBP10.31□□□□□ -0.76
COL6A4P1-204ENST00000508169 FGRP09769 529 aa10.31□□□□□ -0.76
COL6A4P1-204ENST00000508169 NID1P14543 1247 aa10.31□□□□□ -0.76
COL6A4P1-204ENST00000508169 APOBRQ0VD83 1088 aa10.31□□□□□ -0.76
COL6A4P1-204ENST00000508169 DIEXFQ68CQ4 756 aaKnown RBP10.31□□□□□ -0.76
COL6A4P1-204ENST00000508169 SCARA3Q6AZY7 606 aa10.31□□□□□ -0.76
COL6A4P1-204ENST00000508169 BNC2Q6ZN30 1099 aaPredicted RBP10.31□□□□□ -0.76
COL6A4P1-204ENST00000508169 JARID2Q92833 1246 aaPredicted RBP10.31□□□□□ -0.76
COL6A4P1-204ENST00000508169 SEC16BQ96JE7 1060 aa10.31□□□□□ -0.76
COL6A4P1-204ENST00000508169 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.31□□□□□ -0.76
COL6A4P1-204ENST00000508169 ROBO2Q9HCK4 1378 aa10.3□□□□□ -0.76
COL6A4P1-204ENST00000508169 MAP1SQ66K74 1059 aaPredicted RBP10.3□□□□□ -0.76
COL6A4P1-204ENST00000508169 MCF2L2Q86YR7 1114 aa10.3□□□□□ -0.76
COL6A4P1-204ENST00000508169 DMRTC2Q8IXT2 367 aaPredicted RBP10.3□□□□□ -0.76
COL6A4P1-204ENST00000508169 KLHL23Q8NBE8 558 aa10.3□□□□□ -0.76
COL6A4P1-204ENST00000508169 WHAMMQ8TF30 809 aa10.3□□□□□ -0.76
COL6A4P1-204ENST00000508169 GATAD2BQ8WXI9 593 aa10.3□□□□□ -0.76
COL6A4P1-204ENST00000508169 GAL3ST3Q96A11 431 aa10.3□□□□□ -0.76
COL6A4P1-204ENST00000508169 CORO1BQ9BR76 489 aa10.3□□□□□ -0.76
COL6A4P1-204ENST00000508169 TRIM37O94972 964 aa10.29□□□□□ -0.76
COL6A4P1-204ENST00000508169 GTF2F1P35269 517 aaKnown RBP eCLIP10.29□□□□□ -0.76
COL6A4P1-204ENST00000508169 CRKP46108 304 aa10.29□□□□□ -0.76
COL6A4P1-204ENST00000508169 DGKGP49619 791 aa10.29□□□□□ -0.76
COL6A4P1-204ENST00000508169 COL9A3Q14050 684 aaPredicted RBP10.29□□□□□ -0.76
COL6A4P1-204ENST00000508169 POU4F3Q15319 338 aa10.29□□□□□ -0.76
COL6A4P1-204ENST00000508169 MAP4K3Q8IVH8 894 aa10.29□□□□□ -0.76
COL6A4P1-204ENST00000508169 KCNB2Q92953 911 aa10.29□□□□□ -0.76
COL6A4P1-204ENST00000508169 NKD1Q969G9 470 aa10.29□□□□□ -0.76
COL6A4P1-204ENST00000508169 ARMC5Q96C12 935 aa10.29□□□□□ -0.76
COL6A4P1-204ENST00000508169 NRSN2Q9GZP1 204 aa10.29□□□□□ -0.76
COL6A4P1-204ENST00000508169 EFR3BQ9Y2G0 817 aa10.29□□□□□ -0.76
COL6A4P1-204ENST00000508169 NASPP49321 788 aaPredicted RBP10.28□□□□□ -0.76
COL6A4P1-204ENST00000508169 COL9A2Q14055 689 aaPredicted RBP10.28□□□□□ -0.76
COL6A4P1-204ENST00000508169 SETDB1Q15047 1291 aa10.28□□□□□ -0.76
COL6A4P1-204ENST00000508169 DHX38Q92620 1227 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms