RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-210ENST00000507965 COL11A2P13942 1736 aaPredicted RBP7.64□□□□□ -1.19
ATXN3-210ENST00000507965 SCN7AQ01118 1682 aa7.63□□□□□ -1.19
ATXN3-210ENST00000507965 MRC1P22897 1456 aa7.63□□□□□ -1.19
ATXN3-210ENST00000507965 SHISA8B8ZZ34 492 aa7.63□□□□□ -1.19
ATXN3-210ENST00000507965 MMP10P09238 476 aa7.63□□□□□ -1.19
ATXN3-210ENST00000507965 FURINP09958 794 aa7.63□□□□□ -1.19
ATXN3-210ENST00000507965 TRIM26Q12899 539 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-210ENST00000507965 IFNL2Q8IZJ0 200 aa7.63□□□□□ -1.19
ATXN3-210ENST00000507965 Q8N3U1 123 aa7.63□□□□□ -1.19
ATXN3-210ENST00000507965 FAM117AQ9C073 453 aa7.63□□□□□ -1.19
ATXN3-210ENST00000507965 GPBP1L1Q9HC44 474 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-210ENST00000507965 ARHGEF10LQ9HCE6 1279 aa7.63□□□□□ -1.19
ATXN3-210ENST00000507965 GDF2Q9UK05 429 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-210ENST00000507965 KCPQ6ZWJ8 1503 aa7.62□□□□□ -1.19
ATXN3-210ENST00000507965 ANKRD31Q8N7Z5 1873 aa7.62□□□□□ -1.19
ATXN3-210ENST00000507965 PLEKHG2Q9H7P9 1386 aa7.62□□□□□ -1.19
ATXN3-210ENST00000507965 RFC5P40937 340 aa7.62□□□□□ -1.19
ATXN3-210ENST00000507965 AEBP1Q8IUX7 1158 aa7.62□□□□□ -1.19
ATXN3-210ENST00000507965 EDARADDQ8WWZ3 215 aa7.62□□□□□ -1.19
ATXN3-210ENST00000507965 KLRG1Q96E93 195 aa7.62□□□□□ -1.19
ATXN3-210ENST00000507965 KDM4CQ9H3R0 1056 aa7.62□□□□□ -1.19
ATXN3-210ENST00000507965 GPAMQ9HCL2 828 aa7.62□□□□□ -1.19
ATXN3-210ENST00000507965 BCORQ6W2J9 1755 aa7.61□□□□□ -1.19
ATXN3-210ENST00000507965 CNTNAP4Q9C0A0 1308 aa7.61□□□□□ -1.19
ATXN3-210ENST00000507965 GRIN2CQ14957 1233 aa7.61□□□□□ -1.19
ATXN3-210ENST00000507965 TRIM34Q9BYJ4 488 aa7.61□□□□□ -1.19
ATXN3-210ENST00000507965 A0A0G2JLW4 131 aa7.6□□□□□ -1.19
ATXN3-210ENST00000507965 FBXO45P0C2W1 286 aa7.6□□□□□ -1.19
ATXN3-210ENST00000507965 HSPA5P11021 654 aaKnown RBP7.6□□□□□ -1.19
ATXN3-210ENST00000507965 GYS1P13807 737 aa7.6□□□□□ -1.19
ATXN3-210ENST00000507965 AMPD1P23109 780 aa7.6□□□□□ -1.19
ATXN3-210ENST00000507965 SCTRP47872 440 aa7.6□□□□□ -1.19
ATXN3-210ENST00000507965 ZNF530Q6P9A1 599 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-210ENST00000507965 C1orf229Q6ZS94 237 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-210ENST00000507965 GOLGA6L1Q8N7Z2 621 aa7.6□□□□□ -1.19
ATXN3-210ENST00000507965 RTCBQ9Y3I0 505 aaKnown RBP7.6□□□□□ -1.19
ATXN3-210ENST00000507965 PCDHB11Q9Y5F2 797 aa7.6□□□□□ -1.19
ATXN3-210ENST00000507965 CEP350Q5VT06 3117 aa7.6□□□□□ -1.19
ATXN3-210ENST00000507965 ARFGEF2Q9Y6D5 1785 aa7.59□□□□□ -1.19
ATXN3-210ENST00000507965 PIK3R2O00459 728 aa7.59□□□□□ -1.19
ATXN3-210ENST00000507965 HSPA6P17066 643 aa7.59□□□□□ -1.19
ATXN3-210ENST00000507965 COL8A1P27658 744 aa7.59□□□□□ -1.19
ATXN3-210ENST00000507965 MCCD1P59942 119 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-210ENST00000507965 PANK3Q9H999 370 aa7.59□□□□□ -1.19
ATXN3-210ENST00000507965 RAB6BQ9NRW1 208 aa7.59□□□□□ -1.19
ATXN3-210ENST00000507965 SRP68Q9UHB9 627 aaKnown RBP7.59□□□□□ -1.19
ATXN3-210ENST00000507965 BCS1LQ9Y276 419 aa7.59□□□□□ -1.19
ATXN3-210ENST00000507965 A0A1B0GTH6 734 aa7.58□□□□□ -1.2
ATXN3-210ENST00000507965 ERVV-2B6SEH9 535 aa7.58□□□□□ -1.2
ATXN3-210ENST00000507965 PTCD1O75127 700 aaKnown RBP7.58□□□□□ -1.2
ATXN3-210ENST00000507965 DPEP1P16444 411 aa7.58□□□□□ -1.2
ATXN3-210ENST00000507965 HMGB2P26583 209 aaKnown RBP7.58□□□□□ -1.2
ATXN3-210ENST00000507965 GTF2E1P29083 439 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-210ENST00000507965 PHKA2P46019 1235 aa7.58□□□□□ -1.2
ATXN3-210ENST00000507965 DDR1Q08345 913 aa7.58□□□□□ -1.2
ATXN3-210ENST00000507965 TRAPPC3LQ5T215 181 aa7.58□□□□□ -1.2
ATXN3-210ENST00000507965 PGBD3Q8N328 593 aa7.58□□□□□ -1.2
ATXN3-210ENST00000507965 ZNF592Q92610 1267 aa7.58□□□□□ -1.2
ATXN3-210ENST00000507965 PCGF6Q9BYE7 350 aa7.58□□□□□ -1.2
ATXN3-210ENST00000507965 OSBPL3Q9H4L5 887 aa7.58□□□□□ -1.2
ATXN3-210ENST00000507965 DICER1Q9UPY3 1922 aaKnown RBP7.58□□□□□ -1.2
ATXN3-210ENST00000507965 USP42Q9H9J4 1324 aaKnown RBP7.57□□□□□ -1.2
ATXN3-210ENST00000507965 COL3A1P02461 1466 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-210ENST00000507965 TRAK2O60296 914 aa7.57□□□□□ -1.2
ATXN3-210ENST00000507965 RPS6KA4O75676 772 aa7.57□□□□□ -1.2
ATXN3-210ENST00000507965 THBS1P07996 1170 aa7.57□□□□□ -1.2
ATXN3-210ENST00000507965 HSP90AB1P08238 724 aaKnown RBP7.57□□□□□ -1.2
ATXN3-210ENST00000507965 BMP4P12644 408 aa7.57□□□□□ -1.2
ATXN3-210ENST00000507965 KCNA3P22001 575 aa7.57□□□□□ -1.2
ATXN3-210ENST00000507965 RFC4P35249 363 aa7.57□□□□□ -1.2
ATXN3-210ENST00000507965 CRKLP46109 303 aaKnown RBP7.57□□□□□ -1.2
ATXN3-210ENST00000507965 CABP4P57796 275 aa7.57□□□□□ -1.2
ATXN3-210ENST00000507965 EIF4G2P78344 907 aaKnown RBP eCLIP7.57□□□□□ -1.2
ATXN3-210ENST00000507965 CENPCQ03188 943 aa7.57□□□□□ -1.2
ATXN3-210ENST00000507965 LBRQ14739 615 aaKnown RBP7.57□□□□□ -1.2
ATXN3-210ENST00000507965 TMEM259Q4ZIN3 620 aa7.57□□□□□ -1.2
ATXN3-210ENST00000507965 PLEKHO1Q53GL0 409 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-210ENST00000507965 SULT6B1Q6IMI4 303 aa7.57□□□□□ -1.2
ATXN3-210ENST00000507965 CNKSR1Q969H4 720 aa7.57□□□□□ -1.2
ATXN3-210ENST00000507965 KRTAP4-8Q9BYQ9 185 aa7.57□□□□□ -1.2
ATXN3-210ENST00000507965 NMRK2Q9NPI5 230 aa7.57□□□□□ -1.2
ATXN3-210ENST00000507965 CCDC87Q9NVE4 849 aa7.57□□□□□ -1.2
ATXN3-210ENST00000507965 ZNF330Q9Y3S2 320 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-210ENST00000507965 FER1L6Q2WGJ9 1857 aa7.57□□□□□ -1.2
ATXN3-210ENST00000507965 CLSPNQ9HAW4 1339 aa7.56□□□□□ -1.2
ATXN3-210ENST00000507965 GNRH1P01148 92 aa7.56□□□□□ -1.2
ATXN3-210ENST00000507965 MTHFSP49914 203 aa7.56□□□□□ -1.2
ATXN3-210ENST00000507965 TGFB2P61812 414 aa7.56□□□□□ -1.2
ATXN3-210ENST00000507965 C1orf141Q5JVX7 400 aa7.56□□□□□ -1.2
ATXN3-210ENST00000507965 GNASQ5JWF2 1037 aa7.56□□□□□ -1.2
ATXN3-210ENST00000507965 ARHGAP27Q6ZUM4 889 aa7.56□□□□□ -1.2
ATXN3-210ENST00000507965 MORC1Q86VD1 984 aa7.56□□□□□ -1.2
ATXN3-210ENST00000507965 NLGN1Q8N2Q7 840 aa7.56□□□□□ -1.2
ATXN3-210ENST00000507965 NFATC2IPQ8NCF5 419 aa7.56□□□□□ -1.2
ATXN3-210ENST00000507965 ZSCAN10Q96SZ4 725 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-210ENST00000507965 ESYT1Q9BSJ8 1104 aa7.56□□□□□ -1.2
ATXN3-210ENST00000507965 SUV39H2Q9H5I1 410 aa7.56□□□□□ -1.2
ATXN3-210ENST00000507965 COL15A1P39059 1388 aa7.56□□□□□ -1.2
ATXN3-210ENST00000507965 CARMIL3Q8ND23 1372 aa7.56□□□□□ -1.2
ATXN3-210ENST00000507965 LAMB4A4D0S4 1761 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms