RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 ATP1A3P13637 1013 aa20.47■□□□□ 0.87
NUP54-205ENST00000507257 KIF23Q02241 960 aaPredicted RBP20.47■□□□□ 0.87
NUP54-205ENST00000507257 RAD51AP2Q09MP3 1159 aa20.47■□□□□ 0.87
NUP54-205ENST00000507257 SMC1AQ14683 1233 aaKnown RBP20.47■□□□□ 0.87
NUP54-205ENST00000507257 LRP10Q7Z4F1 713 aa20.47■□□□□ 0.87
NUP54-205ENST00000507257 JMYQ8N9B5 988 aa20.47■□□□□ 0.87
NUP54-205ENST00000507257 LRRC59Q96AG4 307 aaKnown RBP20.47■□□□□ 0.87
NUP54-205ENST00000507257 UTP14AQ9BVJ6 771 aaKnown RBP20.47■□□□□ 0.87
NUP54-205ENST00000507257 ARFGAP3Q9NP61 516 aa20.47■□□□□ 0.87
NUP54-205ENST00000507257 NDUFB9Q9Y6M9 179 aa20.47■□□□□ 0.87
NUP54-205ENST00000507257 MAST3O60307 1309 aa20.47■□□□□ 0.87
NUP54-205ENST00000507257 MAP3K15Q6ZN16 1313 aa20.47■□□□□ 0.87
NUP54-205ENST00000507257 BIN1O00499 593 aa20.46■□□□□ 0.87
NUP54-205ENST00000507257 SERPINC1P01008 464 aa20.46■□□□□ 0.87
NUP54-205ENST00000507257 OAS2P29728 719 aaKnown RBP20.46■□□□□ 0.87
NUP54-205ENST00000507257 GORABQ5T7V8 394 aa20.46■□□□□ 0.87
NUP54-205ENST00000507257 EXOC4Q96A65 974 aa20.46■□□□□ 0.87
NUP54-205ENST00000507257 SYTL4Q96C24 671 aaPredicted RBP20.46■□□□□ 0.87
NUP54-205ENST00000507257 FMNL2Q96PY5 1086 aa20.46■□□□□ 0.87
NUP54-205ENST00000507257 NWD2Q9ULI1 1742 aa20.45■□□□□ 0.86
NUP54-205ENST00000507257 RNF113AO15541 343 aaKnown RBP20.45■□□□□ 0.86
NUP54-205ENST00000507257 SASH3O75995 380 aa20.45■□□□□ 0.86
NUP54-205ENST00000507257 CASQ1P31415 396 aa20.45■□□□□ 0.86
NUP54-205ENST00000507257 SYKP43405 635 aa20.45■□□□□ 0.86
NUP54-205ENST00000507257 CASP7P55210 303 aa20.45■□□□□ 0.86
NUP54-205ENST00000507257 ZNF790Q6PG37 636 aa20.45■□□□□ 0.86
NUP54-205ENST00000507257 ANKRD13DQ6ZTN6 518 aa20.45■□□□□ 0.86
NUP54-205ENST00000507257 COPS6Q7L5N1 327 aa20.45■□□□□ 0.86
NUP54-205ENST00000507257 MROH7-TTC4A0A0A0MT08 1334 aa20.45■□□□□ 0.86
NUP54-205ENST00000507257 PPP2R3AQ06190 1150 aa20.45■□□□□ 0.86
NUP54-205ENST00000507257 CFAP100Q494V2 611 aa20.45■□□□□ 0.86
NUP54-205ENST00000507257 DPF2Q92785 391 aa20.45■□□□□ 0.86
NUP54-205ENST00000507257 C19orf44Q9H6X5 657 aa20.45■□□□□ 0.86
NUP54-205ENST00000507257 FEZ2Q9UHY8 353 aaPredicted RBP20.45■□□□□ 0.86
NUP54-205ENST00000507257 CCDC151A5D8V7 595 aa20.44■□□□□ 0.86
NUP54-205ENST00000507257 GOLIM4O00461 696 aa20.44■□□□□ 0.86
NUP54-205ENST00000507257 POLR3DP05423 398 aaPredicted RBP20.44■□□□□ 0.86
NUP54-205ENST00000507257 TUBB4BP68371 445 aa20.44■□□□□ 0.86
NUP54-205ENST00000507257 BRD3Q15059 726 aa20.44■□□□□ 0.86
NUP54-205ENST00000507257 IQUBQ8NA54 791 aa20.44■□□□□ 0.86
NUP54-205ENST00000507257 FUT8Q9BYC5 575 aa20.44■□□□□ 0.86
NUP54-205ENST00000507257 HPS5Q9UPZ3 1129 aa20.44■□□□□ 0.86
NUP54-205ENST00000507257 OLFM4Q6UX06 510 aa20.43■□□□□ 0.86
NUP54-205ENST00000507257 C14orf37Q86TY3 774 aa20.43■□□□□ 0.86
NUP54-205ENST00000507257 SMARCE1Q969G3 411 aa20.43■□□□□ 0.86
NUP54-205ENST00000507257 AK7Q96M32 723 aa20.43■□□□□ 0.86
NUP54-205ENST00000507257 NAP1L2Q9ULW6 460 aaPredicted RBP20.43■□□□□ 0.86
NUP54-205ENST00000507257 WDHD1O75717 1129 aaPredicted RBP20.43■□□□□ 0.86
NUP54-205ENST00000507257 SEC31AO94979 1220 aaKnown RBP20.43■□□□□ 0.86
NUP54-205ENST00000507257 ARHGEF25Q86VW2 580 aa20.43■□□□□ 0.86
NUP54-205ENST00000507257 MB21D2Q8IYB1 491 aaPredicted RBP20.43■□□□□ 0.86
NUP54-205ENST00000507257 HNRNPLLQ8WVV9 542 aaKnown RBP20.43■□□□□ 0.86
NUP54-205ENST00000507257 GOLGA1Q92805 767 aa20.43■□□□□ 0.86
NUP54-205ENST00000507257 KIFC2Q96AC6 838 aa20.43■□□□□ 0.86
NUP54-205ENST00000507257 BAG1Q99933 345 aaPredicted RBP20.43■□□□□ 0.86
NUP54-205ENST00000507257 CWC15Q9P013 229 aaKnown RBP20.43■□□□□ 0.86
NUP54-205ENST00000507257 KIF28PB7ZC32 967 aa20.42■□□□□ 0.86
NUP54-205ENST00000507257 POLR3GO15318 223 aaPredicted RBP20.42■□□□□ 0.86
NUP54-205ENST00000507257 RESP18Q5W5W9 173 aa20.42■□□□□ 0.86
NUP54-205ENST00000507257 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.42■□□□□ 0.86
NUP54-205ENST00000507257 MAP2K7O14733 419 aa20.41■□□□□ 0.86
NUP54-205ENST00000507257 KCNA6P17658 529 aa20.41■□□□□ 0.86
NUP54-205ENST00000507257 UBE3BQ7Z3V4 1068 aa20.41■□□□□ 0.86
NUP54-205ENST00000507257 NEK11Q8NG66 645 aa20.41■□□□□ 0.86
NUP54-205ENST00000507257 GOLGA5Q8TBA6 731 aa20.41■□□□□ 0.86
NUP54-205ENST00000507257 PLEKHG2Q9H7P9 1386 aa20.41■□□□□ 0.86
NUP54-205ENST00000507257 TXLNAP40222 546 aa20.41■□□□□ 0.86
NUP54-205ENST00000507257 IL15P40933 162 aaPredicted RBP20.41■□□□□ 0.86
NUP54-205ENST00000507257 GNG11P61952 73 aa20.41■□□□□ 0.86
NUP54-205ENST00000507257 ST5P78524 1137 aa20.41■□□□□ 0.86
NUP54-205ENST00000507257 TUBB2AQ13885 445 aa20.41■□□□□ 0.86
NUP54-205ENST00000507257 PTPAQ15257 358 aa20.41■□□□□ 0.86
NUP54-205ENST00000507257 OTUD7BQ6GQQ9 843 aa20.41■□□□□ 0.86
NUP54-205ENST00000507257 ATG9AQ7Z3C6 839 aa20.41■□□□□ 0.86
NUP54-205ENST00000507257 TUBB2BQ9BVA1 445 aa20.41■□□□□ 0.86
NUP54-205ENST00000507257 INTS13Q9NVM9 706 aa20.41■□□□□ 0.86
NUP54-205ENST00000507257 KIF1AQ12756 1690 aa20.4■□□□□ 0.86
NUP54-205ENST00000507257 CPDO75976 1380 aa20.4■□□□□ 0.86
NUP54-205ENST00000507257 A0A0G2JLW4 131 aa20.4■□□□□ 0.86
NUP54-205ENST00000507257 KLF18A0A0U1RQI7 1052 aa20.4■□□□□ 0.86
NUP54-205ENST00000507257 GOLGA8BA8MQT2 603 aa20.4■□□□□ 0.86
NUP54-205ENST00000507257 POTEB2H3BUK9 544 aa20.4■□□□□ 0.86
NUP54-205ENST00000507257 ZFYP08048 801 aaPredicted RBP20.4■□□□□ 0.86
NUP54-205ENST00000507257 IMMTQ16891 758 aaKnown RBP20.4■□□□□ 0.86
NUP54-205ENST00000507257 SHC4Q6S5L8 630 aa20.4■□□□□ 0.86
NUP54-205ENST00000507257 IPO4Q8TEX9 1081 aaKnown RBP20.4■□□□□ 0.86
NUP54-205ENST00000507257 PARD6BQ9BYG5 372 aa20.4■□□□□ 0.86
NUP54-205ENST00000507257 SLC52A2Q9HAB3 445 aa20.4■□□□□ 0.86
NUP54-205ENST00000507257 CPLX1O14810 134 aa20.39■□□□□ 0.86
NUP54-205ENST00000507257 PRC1O43663 620 aa20.39■□□□□ 0.86
NUP54-205ENST00000507257 MYL6BP14649 208 aa20.39■□□□□ 0.86
NUP54-205ENST00000507257 CYB5RLQ6IPT4 315 aa20.39■□□□□ 0.86
NUP54-205ENST00000507257 CHST3Q7LGC8 479 aa20.39■□□□□ 0.86
NUP54-205ENST00000507257 THEMISQ8N1K5 641 aaPredicted RBP20.39■□□□□ 0.86
NUP54-205ENST00000507257 WDR24Q96S15 920 aa20.39■□□□□ 0.86
NUP54-205ENST00000507257 CUTAO60888 179 aa20.39■□□□□ 0.85
NUP54-205ENST00000507257 ZNF18P17022 549 aa20.39■□□□□ 0.85
NUP54-205ENST00000507257 ZSCAN26Q16670 478 aa20.39■□□□□ 0.85
NUP54-205ENST00000507257 KRBA2Q6ZNG9 492 aa20.39■□□□□ 0.85
NUP54-205ENST00000507257 TC2NQ8N9U0 490 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms