RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 FLIIQ13045 1269 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 AMOTQ4VCS5 1084 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 DDX53Q86TM3 631 aaKnown RBP5.86□□□□□ -1.47
MATR3-211ENST00000505625 TNPO1Q92973 898 aaKnown RBP5.86□□□□□ -1.47
MATR3-211ENST00000505625 GRIN2BQ13224 1484 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 FYCO1Q9BQS8 1478 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 CAPN9O14815 690 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 KCNJ6P48051 423 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 YARSP54577 528 aaKnown RBP5.86□□□□□ -1.47
MATR3-211ENST00000505625 ZKSCAN3Q9BRR0 538 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 NPHP3Q7Z494 1330 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 MARK3P27448 753 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 FOXR1Q6PIV2 292 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 KRT27Q7Z3Y8 459 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 IQCGQ9H095 443 aaKnown RBP5.86□□□□□ -1.47
MATR3-211ENST00000505625 EIF4G3O43432 1585 aaKnown RBP5.86□□□□□ -1.47
MATR3-211ENST00000505625 TOPBP1Q92547 1522 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 RAD17O75943 681 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 ZNF157P51786 506 aaPredicted RBP5.86□□□□□ -1.47
MATR3-211ENST00000505625 KCNQ4P56696 695 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 AMPD3Q01432 767 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 DUSP27Q5VZP5 1158 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 BSPRYQ5W0U4 402 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 SKAP1Q86WV1 359 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 KCTD17Q8N5Z5 321 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 MAGEB10Q96LZ2 347 aaPredicted RBP5.86□□□□□ -1.47
MATR3-211ENST00000505625 IGFLR1Q9H665 355 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 TTC12Q9H892 705 aaPredicted RBP5.86□□□□□ -1.47
MATR3-211ENST00000505625 KCNH4Q9UQ05 1017 aa5.86□□□□□ -1.47
MATR3-211ENST00000505625 CDC45O75419 566 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 STK10O94804 968 aaKnown RBP5.85□□□□□ -1.47
MATR3-211ENST00000505625 DCLK2Q8N568 766 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 CCDC148Q8NFR7 591 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 PIK3R5Q8WYR1 880 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 COA7Q96BR5 231 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 ZNF653Q96CK0 615 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 NEUROD4Q9HD90 331 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 JADE2Q9NQC1 790 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 RAD18Q9NS91 495 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 IFT140Q96RY7 1462 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 GOLGA8CPA6NN73 597 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 KIF28PB7ZC32 967 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 NEMP1O14524 444 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 GIPC1O14908 333 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 ATXN3P54252 364 aaPredicted RBP5.85□□□□□ -1.47
MATR3-211ENST00000505625 CDR2Q01850 454 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 WDR44Q5JSH3 913 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 CASC4Q6P4E1 433 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 INPP5FQ9Y2H2 1132 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 F6X3S4 739 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 HCLS1P14317 486 aaPredicted RBP5.85□□□□□ -1.47
MATR3-211ENST00000505625 STAT6P42226 847 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 PRIM1P49642 420 aaKnown RBP5.85□□□□□ -1.47
MATR3-211ENST00000505625 HLTFQ14527 1009 aaKnown RBP eCLIP5.85□□□□□ -1.47
MATR3-211ENST00000505625 RNF219Q5W0B1 726 aaPredicted RBP5.85□□□□□ -1.47
MATR3-211ENST00000505625 RMDN2Q96LZ7 410 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 RBM28Q9NW13 759 aaKnown RBP5.85□□□□□ -1.47
MATR3-211ENST00000505625 CCDC196A0A1B0GTZ2 297 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 AFMP43652 599 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 NLRP7Q8WX94 980 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 SLC8A2Q9UPR5 921 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 PRR23AA6NEV1 266 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 SMIM23A6NLE4 172 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 WDR46O15213 610 aaKnown RBP5.85□□□□□ -1.47
MATR3-211ENST00000505625 NDUFB5O43674 189 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 DDHD2O94830 711 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 TBC1D10BQ4KMP7 808 aaPredicted RBP5.85□□□□□ -1.47
MATR3-211ENST00000505625 CFAP157Q5JU67 520 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 SUGCTQ9HAC7 445 aa5.85□□□□□ -1.47
MATR3-211ENST00000505625 RSPH10B2B2RC85 870 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 MAFGO15525 162 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 RSPH10BP0C881 870 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 OCM2P0CE71 109 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 OCMP0CE72 109 aaPredicted RBP5.84□□□□□ -1.47
MATR3-211ENST00000505625 NME9Q86XW9 330 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 MSANTD4Q8NCY6 345 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 TSR3Q9UJK0 312 aaKnown RBP5.84□□□□□ -1.47
MATR3-211ENST00000505625 TRPC5Q9UL62 973 aaPredicted RBP5.84□□□□□ -1.47
MATR3-211ENST00000505625 RAB23Q9ULC3 237 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 CFAP100Q494V2 611 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 KIAA0825Q8IV33 1275 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 GDAP1Q8TB36 358 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 POMGNT1Q8WZA1 660 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 HYPKQ9NX55 129 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 EXOC6BQ9Y2D4 811 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 KDM2BQ8NHM5 1336 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 AATFQ9NY61 560 aaKnown RBP eCLIP5.84□□□□□ -1.47
MATR3-211ENST00000505625 ZNF608Q9ULD9 1512 aaPredicted RBP5.84□□□□□ -1.47
MATR3-211ENST00000505625 SYNJ2O15056 1496 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 STX10O60499 249 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 CFBP00751 764 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 MCM7P33993 719 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 MFSD4BQ5TF39 518 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 SND1Q7KZF4 910 aaKnown RBP eCLIP5.84□□□□□ -1.47
MATR3-211ENST00000505625 HS6ST3Q8IZP7 471 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 TAOK3Q9H2K8 898 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 TRIM75PA6NK02 468 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 ALAS1P13196 640 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 MAN1A1P33908 653 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 GTF2IP78347 998 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms