RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 UBE3CQ15386 1083 aa15.61■□□□□ 0.09
CCSER1-205ENST00000505073 MAGEB6Q8N7X4 407 aa15.61■□□□□ 0.09
CCSER1-205ENST00000505073 FAM84BQ96KN1 310 aaPredicted RBP15.61■□□□□ 0.09
CCSER1-205ENST00000505073 NEK1Q96PY6 1258 aa15.61■□□□□ 0.09
CCSER1-205ENST00000505073 ZNF804BA4D1E1 1349 aa15.6■□□□□ 0.09
CCSER1-205ENST00000505073 GRAPQ13588 217 aa15.6■□□□□ 0.09
CCSER1-205ENST00000505073 VPS37DQ86XT2 251 aa15.6■□□□□ 0.09
CCSER1-205ENST00000505073 GRAPLQ8TC17 118 aaPredicted RBP15.6■□□□□ 0.09
CCSER1-205ENST00000505073 DTNBO60941 627 aa15.6■□□□□ 0.09
CCSER1-205ENST00000505073 MAP3K12Q12852 859 aa15.6■□□□□ 0.09
CCSER1-205ENST00000505073 CAVIN4Q5BKX8 364 aa15.6■□□□□ 0.09
CCSER1-205ENST00000505073 MYRIPQ8NFW9 859 aa15.6■□□□□ 0.09
CCSER1-205ENST00000505073 INTS4Q96HW7 963 aaKnown RBP15.6■□□□□ 0.09
CCSER1-205ENST00000505073 ANKRD2Q9GZV1 360 aa15.6■□□□□ 0.09
CCSER1-205ENST00000505073 HAND2P61296 217 aa15.59■□□□□ 0.09
CCSER1-205ENST00000505073 RPGRQ92834 1020 aaKnown RBP15.59■□□□□ 0.09
CCSER1-205ENST00000505073 COL1A1P02452 1464 aaPredicted RBP15.59■□□□□ 0.09
CCSER1-205ENST00000505073 FGAP02671 866 aa15.59■□□□□ 0.09
CCSER1-205ENST00000505073 GNL3LQ9NVN8 582 aaKnown RBP15.59■□□□□ 0.09
CCSER1-205ENST00000505073 TPCN1Q9ULQ1 816 aa15.59■□□□□ 0.09
CCSER1-205ENST00000505073 TCHHQ07283 1943 aa15.58■□□□□ 0.09
CCSER1-205ENST00000505073 TOB2Q14106 344 aaPredicted RBP15.58■□□□□ 0.08
CCSER1-205ENST00000505073 ME3Q16798 604 aa15.58■□□□□ 0.08
CCSER1-205ENST00000505073 CCDC83Q8IWF9 413 aa15.58■□□□□ 0.08
CCSER1-205ENST00000505073 ARID3AQ99856 593 aa15.58■□□□□ 0.08
CCSER1-205ENST00000505073 CCDC94Q9BW85 323 aaPredicted RBP15.58■□□□□ 0.08
CCSER1-205ENST00000505073 LRRC2Q9BYS8 371 aa15.58■□□□□ 0.08
CCSER1-205ENST00000505073 LRP2BPQ9P2M1 347 aa15.58■□□□□ 0.08
CCSER1-205ENST00000505073 DOCK2Q92608 1830 aa15.58■□□□□ 0.08
CCSER1-205ENST00000505073 NECAB1Q8N987 351 aa15.58■□□□□ 0.08
CCSER1-205ENST00000505073 ABCF2Q9UG63 623 aa15.58■□□□□ 0.08
CCSER1-205ENST00000505073 E7EWF7 191 aa15.57■□□□□ 0.08
CCSER1-205ENST00000505073 FBXO33Q7Z6M2 555 aa15.57■□□□□ 0.08
CCSER1-205ENST00000505073 TXNRD3Q86VQ6 643 aa15.57■□□□□ 0.08
CCSER1-205ENST00000505073 HMGB2P26583 209 aaKnown RBP15.57■□□□□ 0.08
CCSER1-205ENST00000505073 ST3GAL1Q11201 340 aa15.57■□□□□ 0.08
CCSER1-205ENST00000505073 CRY2Q49AN0 593 aa15.57■□□□□ 0.08
CCSER1-205ENST00000505073 AIDAQ96BJ3 306 aa15.57■□□□□ 0.08
CCSER1-205ENST00000505073 PRIMPOLQ96LW4 560 aa15.57■□□□□ 0.08
CCSER1-205ENST00000505073 ZSCAN31Q96LW9 406 aaPredicted RBP15.57■□□□□ 0.08
CCSER1-205ENST00000505073 ANKIB1Q9P2G1 1089 aa15.57■□□□□ 0.08
CCSER1-205ENST00000505073 TNS1Q9HBL0 1735 aaKnown RBP15.56■□□□□ 0.08
CCSER1-205ENST00000505073 FAM184AQ8NB25 1140 aa15.56■□□□□ 0.08
CCSER1-205ENST00000505073 CTNNA3Q9UI47 895 aa15.56■□□□□ 0.08
CCSER1-205ENST00000505073 LAMA4Q16363 1823 aa15.56■□□□□ 0.08
CCSER1-205ENST00000505073 MBD4O95243 580 aa15.56■□□□□ 0.08
CCSER1-205ENST00000505073 APPP05067 770 aa15.56■□□□□ 0.08
CCSER1-205ENST00000505073 HIBADHP31937 336 aaKnown RBP15.56■□□□□ 0.08
CCSER1-205ENST00000505073 Q6ZUG5 572 aa15.56■□□□□ 0.08
CCSER1-205ENST00000505073 GPR101Q96P66 508 aaPredicted RBP15.56■□□□□ 0.08
CCSER1-205ENST00000505073 STRBPQ96SI9 672 aaKnown RBP15.56■□□□□ 0.08
CCSER1-205ENST00000505073 ARMT1Q9H993 441 aa15.56■□□□□ 0.08
CCSER1-205ENST00000505073 IMMTQ16891 758 aaKnown RBP15.55■□□□□ 0.08
CCSER1-205ENST00000505073 UVSSAQ2YD98 709 aa15.55■□□□□ 0.08
CCSER1-205ENST00000505073 DNTTIP2Q5QJE6 756 aaKnown RBP15.55■□□□□ 0.08
CCSER1-205ENST00000505073 MSL1Q68DK7 614 aa15.55■□□□□ 0.08
CCSER1-205ENST00000505073 PIBF1Q8WXW3 757 aa15.55■□□□□ 0.08
CCSER1-205ENST00000505073 SH2B1Q9NRF2 756 aaPredicted RBP15.55■□□□□ 0.08
CCSER1-205ENST00000505073 RAI14Q9P0K7 980 aa15.55■□□□□ 0.08
CCSER1-205ENST00000505073 PNPLA7Q6ZV29 1317 aa15.55■□□□□ 0.08
CCSER1-205ENST00000505073 ANKRD1Q15327 319 aa15.55■□□□□ 0.08
CCSER1-205ENST00000505073 NLGN1Q8N2Q7 840 aa15.55■□□□□ 0.08
CCSER1-205ENST00000505073 RBM17Q96I25 401 aaKnown RBP15.55■□□□□ 0.08
CCSER1-205ENST00000505073 ALDH8A1Q9H2A2 487 aaPredicted RBP15.55■□□□□ 0.08
CCSER1-205ENST00000505073 DENND2AQ9ULE3 1009 aa15.55■□□□□ 0.08
CCSER1-205ENST00000505073 CHST3Q7LGC8 479 aa15.54■□□□□ 0.08
CCSER1-205ENST00000505073 MIGA1Q8NAN2 632 aa15.54■□□□□ 0.08
CCSER1-205ENST00000505073 JAG2Q9Y219 1238 aa15.54■□□□□ 0.08
CCSER1-205ENST00000505073 HMGN5P82970 282 aaKnown RBP15.54■□□□□ 0.08
CCSER1-205ENST00000505073 EN1Q05925 392 aaPredicted RBP15.54■□□□□ 0.08
CCSER1-205ENST00000505073 CHAF1AQ13111 956 aaPredicted RBP15.54■□□□□ 0.08
CCSER1-205ENST00000505073 STK3Q13188 491 aa15.54■□□□□ 0.08
CCSER1-205ENST00000505073 EZH2Q15910 746 aaKnown RBP15.54■□□□□ 0.08
CCSER1-205ENST00000505073 DHX32Q7L7V1 743 aaKnown RBP15.54■□□□□ 0.08
CCSER1-205ENST00000505073 IRS2Q9Y4H2 1338 aa15.53■□□□□ 0.08
CCSER1-205ENST00000505073 CYP7A1P22680 504 aa15.53■□□□□ 0.08
CCSER1-205ENST00000505073 GTF2F1P35269 517 aaKnown RBP eCLIP15.53■□□□□ 0.08
CCSER1-205ENST00000505073 GPSM2P81274 684 aa15.53■□□□□ 0.08
CCSER1-205ENST00000505073 ADGRA1Q86SQ6 560 aa15.53■□□□□ 0.08
CCSER1-205ENST00000505073 LCORLQ8N3X6 602 aa15.53■□□□□ 0.08
CCSER1-205ENST00000505073 SMC3Q9UQE7 1217 aa15.53■□□□□ 0.08
CCSER1-205ENST00000505073 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.53■□□□□ 0.08
CCSER1-205ENST00000505073 ZNF213O14771 459 aa15.53■□□□□ 0.08
CCSER1-205ENST00000505073 PRKAB2O43741 272 aa15.53■□□□□ 0.08
CCSER1-205ENST00000505073 BRF1Q92994 677 aa15.53■□□□□ 0.08
CCSER1-205ENST00000505073 XDHP47989 1333 aa15.53■□□□□ 0.08
CCSER1-205ENST00000505073 GADD45BO75293 160 aaPredicted RBP15.52■□□□□ 0.08
CCSER1-205ENST00000505073 MMP10P09238 476 aa15.52■□□□□ 0.08
CCSER1-205ENST00000505073 HMGB1P09429 215 aaKnown RBP15.52■□□□□ 0.08
CCSER1-205ENST00000505073 FGD1P98174 961 aa15.52■□□□□ 0.08
CCSER1-205ENST00000505073 FLAD1Q8NFF5 587 aa15.52■□□□□ 0.08
CCSER1-205ENST00000505073 FBXO41Q8TF61 875 aa15.52■□□□□ 0.08
CCSER1-205ENST00000505073 EXOSC10Q01780 885 aaKnown RBP15.52■□□□□ 0.07
CCSER1-205ENST00000505073 NOLC1Q14978 699 aaKnown RBP eCLIP15.52■□□□□ 0.07
CCSER1-205ENST00000505073 UTP14CQ5TAP6 766 aaKnown RBP15.52■□□□□ 0.07
CCSER1-205ENST00000505073 NBPF3Q9H094 633 aa15.52■□□□□ 0.07
CCSER1-205ENST00000505073 EPB41L4AQ9HCS5 686 aaPredicted RBP15.52■□□□□ 0.07
CCSER1-205ENST00000505073 PRDM10Q9NQV6 1147 aa15.52■□□□□ 0.07
CCSER1-205ENST00000505073 LEMD3Q9Y2U8 911 aa15.52■□□□□ 0.07
CCSER1-205ENST00000505073 WDR33Q9C0J8 1336 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms