RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 MFSD14AQ96MC6 490 aa9.13□□□□□ -0.95
DEPDC1B-203ENST00000505017 ZNF576Q9H609 170 aa9.13□□□□□ -0.95
DEPDC1B-203ENST00000505017 ABCB6Q9NP58 842 aa9.13□□□□□ -0.95
DEPDC1B-203ENST00000505017 EIF1AYO14602 144 aaKnown RBP9.12□□□□□ -0.95
DEPDC1B-203ENST00000505017 CPNE3O75131 537 aaKnown RBP9.12□□□□□ -0.95
DEPDC1B-203ENST00000505017 B3GALT4O96024 378 aa9.12□□□□□ -0.95
DEPDC1B-203ENST00000505017 ITPKAP23677 461 aa9.12□□□□□ -0.95
DEPDC1B-203ENST00000505017 MAOBP27338 520 aa9.12□□□□□ -0.95
DEPDC1B-203ENST00000505017 GLIS3Q8NEA6 775 aa9.12□□□□□ -0.95
DEPDC1B-203ENST00000505017 FBLIM1Q8WUP2 373 aa9.12□□□□□ -0.95
DEPDC1B-203ENST00000505017 NIF3L1Q9GZT8 377 aa9.12□□□□□ -0.95
DEPDC1B-203ENST00000505017 CYP4F12Q9HCS2 524 aa9.12□□□□□ -0.95
DEPDC1B-203ENST00000505017 GAS2O43903 313 aaKnown RBP9.11□□□□□ -0.95
DEPDC1B-203ENST00000505017 F13BP05160 661 aa9.11□□□□□ -0.95
DEPDC1B-203ENST00000505017 SOX4Q06945 474 aaPredicted RBP9.11□□□□□ -0.95
DEPDC1B-203ENST00000505017 CCDC74AQ96AQ1 378 aa9.11□□□□□ -0.95
DEPDC1B-203ENST00000505017 CITED4Q96RK1 184 aa9.11□□□□□ -0.95
DEPDC1B-203ENST00000505017 WDR64B1ANS9 1081 aa9.1□□□□□ -0.95
DEPDC1B-203ENST00000505017 ADMP35318 185 aa9.1□□□□□ -0.95
DEPDC1B-203ENST00000505017 PDE3BQ13370 1112 aa9.1□□□□□ -0.95
DEPDC1B-203ENST00000505017 DTX1Q86Y01 620 aa9.1□□□□□ -0.95
DEPDC1B-203ENST00000505017 EPS8L3Q8TE67 593 aaKnown RBP9.1□□□□□ -0.95
DEPDC1B-203ENST00000505017 GATA6Q92908 595 aa9.1□□□□□ -0.95
DEPDC1B-203ENST00000505017 EHD4Q9H223 541 aa9.1□□□□□ -0.95
DEPDC1B-203ENST00000505017 TIMELESSQ9UNS1 1208 aa9.1□□□□□ -0.95
DEPDC1B-203ENST00000505017 OAS3Q9Y6K5 1087 aaKnown RBP9.1□□□□□ -0.95
DEPDC1B-203ENST00000505017 SOWAHDA6NJG2 315 aa9.09□□□□□ -0.95
DEPDC1B-203ENST00000505017 ADH5P11766 374 aa9.09□□□□□ -0.95
DEPDC1B-203ENST00000505017 FAAP100Q0VG06 881 aa9.09□□□□□ -0.95
DEPDC1B-203ENST00000505017 EZH1Q92800 747 aaPredicted RBP9.09□□□□□ -0.95
DEPDC1B-203ENST00000505017 ACTL7BQ9Y614 415 aa9.09□□□□□ -0.95
DEPDC1B-203ENST00000505017 POU4F3Q15319 338 aa9.08□□□□□ -0.96
DEPDC1B-203ENST00000505017 PRPF40BQ6NWY9 871 aaKnown RBP9.08□□□□□ -0.96
DEPDC1B-203ENST00000505017 PI16Q6UXB8 463 aa9.08□□□□□ -0.96
DEPDC1B-203ENST00000505017 KRTAP4-12Q9BQ66 201 aa9.08□□□□□ -0.96
DEPDC1B-203ENST00000505017 RBCK1Q9BYM8 510 aa9.08□□□□□ -0.96
DEPDC1B-203ENST00000505017 RXRBP28702 533 aa9.07□□□□□ -0.96
DEPDC1B-203ENST00000505017 GRM2Q14416 872 aa9.07□□□□□ -0.96
DEPDC1B-203ENST00000505017 FBXL6Q8N531 539 aa9.07□□□□□ -0.96
DEPDC1B-203ENST00000505017 ALKBH8Q96BT7 664 aaKnown RBP9.07□□□□□ -0.96
DEPDC1B-203ENST00000505017 CSRNP1Q96S65 589 aa9.07□□□□□ -0.96
DEPDC1B-203ENST00000505017 DNAJC25Q9H1X3 360 aa9.07□□□□□ -0.96
DEPDC1B-203ENST00000505017 FAM95CA0A1B0GW59 222 aa9.06□□□□□ -0.96
DEPDC1B-203ENST00000505017 CYP11A1P05108 521 aa9.06□□□□□ -0.96
DEPDC1B-203ENST00000505017 NEFLP07196 543 aa9.06□□□□□ -0.96
DEPDC1B-203ENST00000505017 INTS5Q6P9B9 1019 aaKnown RBP9.06□□□□□ -0.96
DEPDC1B-203ENST00000505017 GSX1Q9H4S2 264 aaPredicted RBP9.06□□□□□ -0.96
DEPDC1B-203ENST00000505017 FAM105AQ9NUU6 356 aa9.06□□□□□ -0.96
DEPDC1B-203ENST00000505017 TMEM238LA0A1B0GVL6 79 aa9.05□□□□□ -0.96
DEPDC1B-203ENST00000505017 GP2P55259 537 aaKnown RBP9.05□□□□□ -0.96
DEPDC1B-203ENST00000505017 PTPN12Q05209 780 aaKnown RBP9.05□□□□□ -0.96
DEPDC1B-203ENST00000505017 NFXL1Q6ZNB6 911 aa9.05□□□□□ -0.96
DEPDC1B-203ENST00000505017 TMC7Q7Z402 723 aa9.05□□□□□ -0.96
DEPDC1B-203ENST00000505017 WDR89Q96FK6 387 aaPredicted RBP9.05□□□□□ -0.96
DEPDC1B-203ENST00000505017 PRKAG2Q9UGJ0 569 aa9.05□□□□□ -0.96
DEPDC1B-203ENST00000505017 GNEQ9Y223 722 aaKnown RBP9.05□□□□□ -0.96
DEPDC1B-203ENST00000505017 USP11P51784 963 aa9.04□□□□□ -0.96
DEPDC1B-203ENST00000505017 NFKBIBQ15653 356 aa9.04□□□□□ -0.96
DEPDC1B-203ENST00000505017 MSMPQ1L6U9 139 aa9.04□□□□□ -0.96
DEPDC1B-203ENST00000505017 MCTP1Q6DN14 999 aa9.04□□□□□ -0.96
DEPDC1B-203ENST00000505017 CCER1Q8TC90 406 aaPredicted RBP9.04□□□□□ -0.96
DEPDC1B-203ENST00000505017 SEMA6CQ9H3T2 930 aa9.04□□□□□ -0.96
DEPDC1B-203ENST00000505017 PIM2Q9P1W9 311 aa9.04□□□□□ -0.96
DEPDC1B-203ENST00000505017 DYNC1LI2O43237 492 aaPredicted RBP9.03□□□□□ -0.96
DEPDC1B-203ENST00000505017 NFICP08651 508 aa9.03□□□□□ -0.96
DEPDC1B-203ENST00000505017 ZNF157P51786 506 aaPredicted RBP9.03□□□□□ -0.96
DEPDC1B-203ENST00000505017 DSC3Q14574 896 aa9.03□□□□□ -0.96
DEPDC1B-203ENST00000505017 AKAP4Q5JQC9 854 aa9.03□□□□□ -0.96
DEPDC1B-203ENST00000505017 SEZ6L2Q6UXD5 910 aa9.03□□□□□ -0.96
DEPDC1B-203ENST00000505017 TMC1Q8TDI8 760 aa9.03□□□□□ -0.96
DEPDC1B-203ENST00000505017 DMRTB1Q96MA1 342 aa9.03□□□□□ -0.96
DEPDC1B-203ENST00000505017 WDR18Q9BV38 432 aa9.03□□□□□ -0.96
DEPDC1B-203ENST00000505017 ACSS3Q9H6R3 686 aa9.03□□□□□ -0.96
DEPDC1B-203ENST00000505017 PPP1R9AQ9ULJ8 1098 aa9.03□□□□□ -0.96
DEPDC1B-203ENST00000505017 COL17A1Q9UMD9 1497 aaPredicted RBP9.02□□□□□ -0.96
DEPDC1B-203ENST00000505017 AOC2O75106 756 aa9.02□□□□□ -0.97
DEPDC1B-203ENST00000505017 GRIK1P39086 918 aa9.02□□□□□ -0.97
DEPDC1B-203ENST00000505017 ZAR1Q86SH2 424 aa9.02□□□□□ -0.97
DEPDC1B-203ENST00000505017 FAM170BA6NMN3 283 aa9.01□□□□□ -0.97
DEPDC1B-203ENST00000505017 GADD45BO75293 160 aaPredicted RBP9.01□□□□□ -0.97
DEPDC1B-203ENST00000505017 RPS26P11Q5JNZ5 115 aaPredicted RBP9.01□□□□□ -0.97
DEPDC1B-203ENST00000505017 PAOXQ6QHF9 649 aa9.01□□□□□ -0.97
DEPDC1B-203ENST00000505017 CORO1BQ9BR76 489 aa9.01□□□□□ -0.97
DEPDC1B-203ENST00000505017 CCDC86Q9H6F5 360 aaKnown RBP9.01□□□□□ -0.97
DEPDC1B-203ENST00000505017 C1GALT1Q9NS00 363 aa9.01□□□□□ -0.97
DEPDC1B-203ENST00000505017 EIF4EBP3O60516 100 aaPredicted RBP9□□□□□ -0.97
DEPDC1B-203ENST00000505017 FOSL1P15407 271 aa9□□□□□ -0.97
DEPDC1B-203ENST00000505017 RAB6AP20340 208 aa9□□□□□ -0.97
DEPDC1B-203ENST00000505017 DYMQ7RTS9 669 aa9□□□□□ -0.97
DEPDC1B-203ENST00000505017 KRTAP19-1Q8IUB9 90 aa9□□□□□ -0.97
DEPDC1B-203ENST00000505017 TBC1D32Q96NH3 1257 aa9□□□□□ -0.97
DEPDC1B-203ENST00000505017 ZNF862O60290 1169 aa8.99□□□□□ -0.97
DEPDC1B-203ENST00000505017 LIG1P18858 919 aa8.99□□□□□ -0.97
DEPDC1B-203ENST00000505017 STK35Q8TDR2 534 aa8.99□□□□□ -0.97
DEPDC1B-203ENST00000505017 ATG3Q9NT62 314 aa8.99□□□□□ -0.97
DEPDC1B-203ENST00000505017 LEMD3Q9Y2U8 911 aa8.99□□□□□ -0.97
DEPDC1B-203ENST00000505017 PCDHGC5Q9Y5F6 944 aa8.99□□□□□ -0.97
DEPDC1B-203ENST00000505017 ZCCHC6Q5VYS8 1495 aaKnown RBP8.98□□□□□ -0.97
DEPDC1B-203ENST00000505017 PDZD3Q86UT5 571 aa8.98□□□□□ -0.97
DEPDC1B-203ENST00000505017 OSBPL1AQ9BXW6 950 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms