RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 PI4K2BQ8TCG2 481 aa16.25■□□□□ 0.19
TCOF1-207ENST00000504761 UBA7P41226 1012 aa16.25■□□□□ 0.19
TCOF1-207ENST00000504761 GTF2IP78347 998 aa16.25■□□□□ 0.19
TCOF1-207ENST00000504761 PPLO60437 1756 aa16.25■□□□□ 0.19
TCOF1-207ENST00000504761 CD163L1Q9NR16 1453 aa16.24■□□□□ 0.19
TCOF1-207ENST00000504761 NCAPD2Q15021 1401 aa16.24■□□□□ 0.19
TCOF1-207ENST00000504761 XRCC6P12956 609 aaKnown RBP eCLIP16.24■□□□□ 0.19
TCOF1-207ENST00000504761 SYKP43405 635 aa16.24■□□□□ 0.19
TCOF1-207ENST00000504761 TTLL12Q14166 644 aaPredicted RBP16.24■□□□□ 0.19
TCOF1-207ENST00000504761 USP17L12C9JPN9 530 aa16.24■□□□□ 0.19
TCOF1-207ENST00000504761 USP17L21D6R901 530 aa16.24■□□□□ 0.19
TCOF1-207ENST00000504761 WDR78Q5VTH9 848 aa16.24■□□□□ 0.19
TCOF1-207ENST00000504761 PPFIBP1Q86W92 1011 aa16.24■□□□□ 0.19
TCOF1-207ENST00000504761 WDR66Q8TBY9 1149 aa16.24■□□□□ 0.19
TCOF1-207ENST00000504761 PLCG2P16885 1265 aa16.24■□□□□ 0.19
TCOF1-207ENST00000504761 KRT27Q7Z3Y8 459 aa16.24■□□□□ 0.19
TCOF1-207ENST00000504761 SPTLC2O15270 562 aa16.23■□□□□ 0.19
TCOF1-207ENST00000504761 MYO1BO43795 1136 aa16.23■□□□□ 0.19
TCOF1-207ENST00000504761 AFMP43652 599 aa16.23■□□□□ 0.19
TCOF1-207ENST00000504761 DSCC1Q9BVC3 393 aa16.23■□□□□ 0.19
TCOF1-207ENST00000504761 TPCN1Q9ULQ1 816 aa16.23■□□□□ 0.19
TCOF1-207ENST00000504761 SMTNL1A8MU46 457 aa16.23■□□□□ 0.19
TCOF1-207ENST00000504761 H0YIN7 160 aa16.23■□□□□ 0.19
TCOF1-207ENST00000504761 IDEP14735 1019 aa16.23■□□□□ 0.19
TCOF1-207ENST00000504761 TGFBRAP1Q8WUH2 860 aa16.23■□□□□ 0.19
TCOF1-207ENST00000504761 CYP19A1P11511 503 aaPredicted RBP16.23■□□□□ 0.19
TCOF1-207ENST00000504761 NAPAP54920 295 aa16.23■□□□□ 0.19
TCOF1-207ENST00000504761 FAM47AQ5JRC9 791 aa16.23■□□□□ 0.19
TCOF1-207ENST00000504761 MFSD14BQ5SR56 506 aa16.23■□□□□ 0.19
TCOF1-207ENST00000504761 LRSAM1Q6UWE0 723 aa16.23■□□□□ 0.19
TCOF1-207ENST00000504761 CDC37L1Q7L3B6 337 aa16.23■□□□□ 0.19
TCOF1-207ENST00000504761 MAP4K1Q92918 833 aa16.23■□□□□ 0.19
TCOF1-207ENST00000504761 THRAP3Q9Y2W1 955 aaKnown RBP16.23■□□□□ 0.19
TCOF1-207ENST00000504761 CTAGE5O15320 804 aa16.22■□□□□ 0.19
TCOF1-207ENST00000504761 TCP10Q12799 353 aa16.22■□□□□ 0.19
TCOF1-207ENST00000504761 CMTR1Q8N1G2 835 aaKnown RBP16.22■□□□□ 0.19
TCOF1-207ENST00000504761 JDP2Q8WYK2 163 aa16.22■□□□□ 0.19
TCOF1-207ENST00000504761 MRPS27Q92552 414 aaKnown RBP16.22■□□□□ 0.19
TCOF1-207ENST00000504761 AFF2P51816 1311 aa16.22■□□□□ 0.19
TCOF1-207ENST00000504761 ERVV-1B6SEH8 477 aa16.22■□□□□ 0.19
TCOF1-207ENST00000504761 CYP21A2P08686 494 aa16.22■□□□□ 0.19
TCOF1-207ENST00000504761 KCNG4Q8TDN1 519 aa16.22■□□□□ 0.19
TCOF1-207ENST00000504761 CCDC12Q8WUD4 166 aaPredicted RBP16.22■□□□□ 0.19
TCOF1-207ENST00000504761 V9GY48 417 aaPredicted RBP16.22■□□□□ 0.19
TCOF1-207ENST00000504761 TM6SF1Q9BZW5 370 aa16.22■□□□□ 0.19
TCOF1-207ENST00000504761 HDAC9Q9UKV0 1011 aa16.22■□□□□ 0.19
TCOF1-207ENST00000504761 NRKQ7Z2Y5 1582 aa16.22■□□□□ 0.19
TCOF1-207ENST00000504761 CIAO1O76071 339 aa16.21■□□□□ 0.19
TCOF1-207ENST00000504761 ADCY5O95622 1261 aa16.21■□□□□ 0.19
TCOF1-207ENST00000504761 DOK7Q18PE1 504 aa16.21■□□□□ 0.19
TCOF1-207ENST00000504761 IFNL3Q8IZI9 196 aa16.21■□□□□ 0.19
TCOF1-207ENST00000504761 TCP11L1Q9NUJ3 509 aa16.21■□□□□ 0.19
TCOF1-207ENST00000504761 POLD1P28340 1107 aa16.21■□□□□ 0.19
TCOF1-207ENST00000504761 MNS1Q8NEH6 495 aa16.21■□□□□ 0.19
TCOF1-207ENST00000504761 TMEM87BQ96K49 555 aa16.21■□□□□ 0.19
TCOF1-207ENST00000504761 RICTORQ6R327 1708 aa16.21■□□□□ 0.19
TCOF1-207ENST00000504761 PATL2C9JE40 543 aaKnown RBP16.21■□□□□ 0.18
TCOF1-207ENST00000504761 TMEM132AQ24JP5 1023 aa16.21■□□□□ 0.18
TCOF1-207ENST00000504761 FBXO3Q9UK99 471 aa16.21■□□□□ 0.18
TCOF1-207ENST00000504761 SERPINB2P05120 415 aa16.2■□□□□ 0.18
TCOF1-207ENST00000504761 DNAJC25Q9H1X3 360 aa16.2■□□□□ 0.18
TCOF1-207ENST00000504761 A0A1B0GVL5 298 aa16.2■□□□□ 0.18
TCOF1-207ENST00000504761 GNAQP50148 359 aa16.2■□□□□ 0.18
TCOF1-207ENST00000504761 ANO6Q4KMQ2 910 aa16.2■□□□□ 0.18
TCOF1-207ENST00000504761 OSBP2Q969R2 916 aa16.2■□□□□ 0.18
TCOF1-207ENST00000504761 ZSWIM6Q9HCJ5 1215 aa16.2■□□□□ 0.18
TCOF1-207ENST00000504761 TRIM75PA6NK02 468 aa16.2■□□□□ 0.18
TCOF1-207ENST00000504761 GADD45BO75293 160 aaPredicted RBP16.2■□□□□ 0.18
TCOF1-207ENST00000504761 ADD1P35611 737 aaKnown RBP16.2■□□□□ 0.18
TCOF1-207ENST00000504761 AKNAD1Q5T1N1 836 aa16.2■□□□□ 0.18
TCOF1-207ENST00000504761 CUL5Q93034 780 aa16.2■□□□□ 0.18
TCOF1-207ENST00000504761 UBA5Q9GZZ9 404 aa16.2■□□□□ 0.18
TCOF1-207ENST00000504761 MTX1Q13505 466 aa16.19■□□□□ 0.18
TCOF1-207ENST00000504761 TMEM266Q2M3C6 531 aa16.19■□□□□ 0.18
TCOF1-207ENST00000504761 TTC6Q86TZ1 520 aa16.19■□□□□ 0.18
TCOF1-207ENST00000504761 ZNF804BA4D1E1 1349 aa16.19■□□□□ 0.18
TCOF1-207ENST00000504761 MAST3O60307 1309 aa16.19■□□□□ 0.18
TCOF1-207ENST00000504761 ZSCAN30Q86W11 494 aa16.19■□□□□ 0.18
TCOF1-207ENST00000504761 SMARCE1Q969G3 411 aa16.19■□□□□ 0.18
TCOF1-207ENST00000504761 ZMYM1Q5SVZ6 1142 aa16.19■□□□□ 0.18
TCOF1-207ENST00000504761 CPLX3Q8WVH0 158 aa16.19■□□□□ 0.18
TCOF1-207ENST00000504761 PUS7LQ9H0K6 701 aaKnown RBP16.19■□□□□ 0.18
TCOF1-207ENST00000504761 GPR108Q9NPR9 543 aa16.19■□□□□ 0.18
TCOF1-207ENST00000504761 A0A0U1RQG5 324 aaPredicted RBP16.19■□□□□ 0.18
TCOF1-207ENST00000504761 STX1AQ16623 288 aa16.19■□□□□ 0.18
TCOF1-207ENST00000504761 CLIP2Q9UDT6 1046 aa16.19■□□□□ 0.18
TCOF1-207ENST00000504761 CBFA2T2O43439 604 aa16.18■□□□□ 0.18
TCOF1-207ENST00000504761 SCNN1DP51172 638 aa16.18■□□□□ 0.18
TCOF1-207ENST00000504761 LARGE2Q8N3Y3 721 aa16.18■□□□□ 0.18
TCOF1-207ENST00000504761 GPR101Q96P66 508 aaPredicted RBP16.18■□□□□ 0.18
TCOF1-207ENST00000504761 RAB34Q9BZG1 259 aa16.18■□□□□ 0.18
TCOF1-207ENST00000504761 RTL9Q8NET4 1388 aa16.18■□□□□ 0.18
TCOF1-207ENST00000504761 CALM1P0DP23 149 aa16.18■□□□□ 0.18
TCOF1-207ENST00000504761 CALM2P0DP24 149 aa16.18■□□□□ 0.18
TCOF1-207ENST00000504761 CALM3P0DP25 149 aa16.18■□□□□ 0.18
TCOF1-207ENST00000504761 TFAP4Q01664 338 aa16.18■□□□□ 0.18
TCOF1-207ENST00000504761 GPCPD1Q9NPB8 672 aa16.18■□□□□ 0.18
TCOF1-207ENST00000504761 M0R2C6 588 aa16.18■□□□□ 0.18
TCOF1-207ENST00000504761 MCM7P33993 719 aa16.18■□□□□ 0.18
TCOF1-207ENST00000504761 KDM4FA0A1W2PPD8 638 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms