RNA–Protein interactions for RNA: ENST00000504440.1

NPHP3-AS1-202, NPHP3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP3-AS1, Length 2,507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-AS1-202ENST00000504440 PRPF40BQ6NWY9 871 aaKnown RBP7.87□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.87□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 CCDC83Q8IWF9 413 aa7.87□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 NECAB1Q8N987 351 aa7.87□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 KIF1BPQ96EK5 621 aa7.87□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 FAM13BQ9NYF5 915 aa7.87□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 USP25Q9UHP3 1055 aa7.87□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.87□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 WDR33Q9C0J8 1336 aaKnown RBP7.87□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 TOM1O60784 492 aa7.86□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 PTMAP06454 111 aaKnown RBP7.86□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 ZSCAN22P10073 491 aaPredicted RBP7.86□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 IL17RAQ96F46 866 aa7.86□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 STX6O43752 255 aa7.86□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 PRMT3O60678 531 aa7.86□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 HCLS1P14317 486 aaPredicted RBP7.86□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 ST3GAL1Q11201 340 aa7.86□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 GIMAP6Q6P9H5 292 aa7.86□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 TRIM50Q86XT4 487 aa7.86□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 CNTROBQ8N137 903 aa7.86□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 TCEANC2Q96MN5 208 aa7.86□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 CCDC39Q9UFE4 941 aa7.86□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 LIMCH1Q9UPQ0 1083 aa7.86□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 USP54Q70EL1 1684 aa7.86□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 FAM208AQ9UK61 1670 aaKnown RBP7.86□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 MARF1Q9Y4F3 1742 aaKnown RBP7.86□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 ADCY9O60503 1353 aa7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 AOX1Q06278 1338 aa7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 UQCRHLA0A096LP55 91 aa7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 POTEMA6NI47 508 aa7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 BTBD11A6QL63 1104 aa7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 DKK1O94907 266 aa7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 UQCRHP07919 91 aa7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 ATP1A2P50993 1020 aa7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 PTPN5P54829 565 aa7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 GTF2IP78347 998 aa7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 DNM1Q05193 864 aaKnown RBP7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 FAM173BQ6P4H8 233 aa7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 JAKMIP1Q96N16 626 aaKnown RBP7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 TTC12Q9H892 705 aaPredicted RBP7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 HYPKQ9NX55 129 aa7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 CHMP3Q9Y3E7 222 aa7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 TAF6LQ9Y6J9 622 aa7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 AP5Z1O43299 807 aa7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 GJB2P29033 226 aa7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 SWI5Q1ZZU3 235 aa7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 TJAP1Q5JTD0 557 aa7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 BPHLQ86WA6 291 aaPredicted RBP7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 ZNF511Q8NB15 262 aa7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 NKX2-3Q8TAU0 364 aa7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 KLHDC4Q8TBB5 520 aa7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 FAM227BQ96M60 508 aa7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 CCDC8Q9H0W5 538 aaPredicted RBP7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 SMC3Q9UQE7 1217 aa7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 MAP3K2Q9Y2U5 619 aa7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 FCF1Q9Y324 198 aaKnown RBP7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 TRPM3Q9HCF6 1732 aaPredicted RBP7.85□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 ROBO1Q9Y6N7 1651 aa7.84□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 S1PR4O95977 384 aa7.84□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 F13A1P00488 732 aa7.84□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 HSPA1LP34931 641 aa7.84□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 PSME1Q06323 249 aa7.84□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 AIMP1Q12904 312 aaKnown RBP7.84□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 ZNF530Q6P9A1 599 aaPredicted RBP7.84□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 BRINP3Q76B58 766 aa7.84□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 LARGE2Q8N3Y3 721 aa7.84□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 KRTAP3-3Q9BYR6 98 aa7.84□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 KRTAP3-2Q9BYR7 98 aa7.84□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 DIAPH3Q9NSV4 1193 aa7.84□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 PDRG1Q9NUG6 133 aa7.84□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 TLR7Q9NYK1 1049 aaKnown RBP7.84□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 ADCY5O95622 1261 aa7.84□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 ME3Q16798 604 aa7.84□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 TPCN2Q8NHX9 752 aa7.84□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 IP6K1Q92551 441 aa7.84□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 SYAP1Q96A49 352 aaPredicted RBP7.84□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 PRIMPOLQ96LW4 560 aa7.84□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 SIL1Q9H173 461 aa7.84□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 C9orf78Q9NZ63 289 aaPredicted RBP7.84□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 MTMR6Q9Y217 621 aa7.84□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 LRRC37A3O60309 1634 aa7.84□□□□□ -1.15
NPHP3-AS1-202ENST00000504440 CEMIPQ8WUJ3 1361 aa7.83□□□□□ -1.16
NPHP3-AS1-202ENST00000504440 VPS37CA5D8V6 355 aaPredicted RBP7.83□□□□□ -1.16
NPHP3-AS1-202ENST00000504440 FAM177BA6PVY3 158 aa7.83□□□□□ -1.16
NPHP3-AS1-202ENST00000504440 SFI1A8K8P3 1242 aa7.83□□□□□ -1.16
NPHP3-AS1-202ENST00000504440 CHGBP05060 677 aa7.83□□□□□ -1.16
NPHP3-AS1-202ENST00000504440 TEFQ10587 303 aa7.83□□□□□ -1.16
NPHP3-AS1-202ENST00000504440 CCDC183Q5T5S1 534 aa7.83□□□□□ -1.16
NPHP3-AS1-202ENST00000504440 CCDC102BQ68D86 513 aa7.83□□□□□ -1.16
NPHP3-AS1-202ENST00000504440 FERMT3Q86UX7 667 aa7.83□□□□□ -1.16
NPHP3-AS1-202ENST00000504440 AACSQ86V21 672 aa7.83□□□□□ -1.16
NPHP3-AS1-202ENST00000504440 SIX5Q8N196 739 aa7.83□□□□□ -1.16
NPHP3-AS1-202ENST00000504440 DDX17Q92841 729 aaKnown RBP7.83□□□□□ -1.16
NPHP3-AS1-202ENST00000504440 SLC10A4Q96EP9 437 aa7.83□□□□□ -1.16
NPHP3-AS1-202ENST00000504440 EDC3Q96F86 508 aaKnown RBP7.83□□□□□ -1.16
NPHP3-AS1-202ENST00000504440 KAZALD1Q96I82 304 aa7.83□□□□□ -1.16
NPHP3-AS1-202ENST00000504440 GLRX3O76003 335 aaKnown RBP7.83□□□□□ -1.16
NPHP3-AS1-202ENST00000504440 SASH1O94885 1247 aa7.83□□□□□ -1.16
NPHP3-AS1-202ENST00000504440 CLASRPQ8N2M8 674 aaKnown RBP7.83□□□□□ -1.16
NPHP3-AS1-202ENST00000504440 TMEM87AQ8NBN3 555 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms