RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 SPRED3Q2MJR0 410 aa7.81□□□□□ -1.16
SUB1-204ENST00000504016 CDPF1Q6NVV7 123 aa7.81□□□□□ -1.16
SUB1-204ENST00000504016 CCNJLQ8IV13 435 aa7.81□□□□□ -1.16
SUB1-204ENST00000504016 GLYCTKQ8IVS8 523 aa7.81□□□□□ -1.16
SUB1-204ENST00000504016 KRTAP4-12Q9BQ66 201 aa7.81□□□□□ -1.16
SUB1-204ENST00000504016 CLEC4MQ9H2X3 399 aaPredicted RBP7.81□□□□□ -1.16
SUB1-204ENST00000504016 H3BRB1 525 aa7.8□□□□□ -1.16
SUB1-204ENST00000504016 CYP11A1P05108 521 aa7.8□□□□□ -1.16
SUB1-204ENST00000504016 TAL1P17542 331 aaPredicted RBP7.8□□□□□ -1.16
SUB1-204ENST00000504016 GRIA4P48058 902 aa7.8□□□□□ -1.16
SUB1-204ENST00000504016 ZNF423Q2M1K9 1284 aa7.8□□□□□ -1.16
SUB1-204ENST00000504016 C2CD4AQ8NCU7 369 aaPredicted RBP7.8□□□□□ -1.16
SUB1-204ENST00000504016 YIPF2Q9BWQ6 316 aa7.8□□□□□ -1.16
SUB1-204ENST00000504016 TUT1Q9H6E5 874 aaKnown RBP7.8□□□□□ -1.16
SUB1-204ENST00000504016 MAOBP27338 520 aa7.79□□□□□ -1.16
SUB1-204ENST00000504016 POU4F3Q15319 338 aa7.79□□□□□ -1.16
SUB1-204ENST00000504016 TCF12Q99081 682 aa7.79□□□□□ -1.16
SUB1-204ENST00000504016 USTQ9Y2C2 406 aa7.79□□□□□ -1.16
SUB1-204ENST00000504016 SERPINB4P48594 390 aa7.78□□□□□ -1.16
SUB1-204ENST00000504016 HP1BP3Q5SSJ5 553 aaPredicted RBP7.78□□□□□ -1.16
SUB1-204ENST00000504016 USPL1Q5W0Q7 1092 aa7.78□□□□□ -1.16
SUB1-204ENST00000504016 KRTAP1-3Q8IUG1 177 aa7.78□□□□□ -1.16
SUB1-204ENST00000504016 RETREG2Q8NC44 543 aa7.78□□□□□ -1.16
SUB1-204ENST00000504016 DDX54Q8TDD1 881 aaKnown RBP7.78□□□□□ -1.16
SUB1-204ENST00000504016 NRSN2Q9GZP1 204 aa7.78□□□□□ -1.16
SUB1-204ENST00000504016 ZFYVE1Q9HBF4 777 aa7.78□□□□□ -1.16
SUB1-204ENST00000504016 RAD18Q9NS91 495 aa7.78□□□□□ -1.16
SUB1-204ENST00000504016 NDUFB5O43674 189 aa7.77□□□□□ -1.17
SUB1-204ENST00000504016 ADH5P11766 374 aa7.77□□□□□ -1.17
SUB1-204ENST00000504016 CPSF6Q16630 551 aaKnown RBP eCLIP7.77□□□□□ -1.171e-10■■■□□ 15.8
SUB1-204ENST00000504016 TBC1D32Q96NH3 1257 aa7.77□□□□□ -1.17
SUB1-204ENST00000504016 METTL22Q9BUU2 404 aaPredicted RBP7.77□□□□□ -1.17
SUB1-204ENST00000504016 EHD4Q9H223 541 aa7.77□□□□□ -1.17
SUB1-204ENST00000504016 GOLGA2P5Q9HBQ8 144 aa7.77□□□□□ -1.17
SUB1-204ENST00000504016 ANGEL1Q9UNK9 670 aaKnown RBP7.77□□□□□ -1.17
SUB1-204ENST00000504016 CPNE3O75131 537 aaKnown RBP7.76□□□□□ -1.17
SUB1-204ENST00000504016 CTSBP07858 339 aa7.76□□□□□ -1.17
SUB1-204ENST00000504016 FOSL1P15407 271 aa7.76□□□□□ -1.17
SUB1-204ENST00000504016 TXKP42681 527 aa7.76□□□□□ -1.17
SUB1-204ENST00000504016 PDE3BQ13370 1112 aa7.76□□□□□ -1.17
SUB1-204ENST00000504016 AKAP4Q5JQC9 854 aa7.76□□□□□ -1.17
SUB1-204ENST00000504016 LCE3BQ5TA77 95 aa7.76□□□□□ -1.17
SUB1-204ENST00000504016 KIAA0319Q5VV43 1072 aa7.76□□□□□ -1.17
SUB1-204ENST00000504016 DYMQ7RTS9 669 aa7.76□□□□□ -1.17
SUB1-204ENST00000504016 SHISA5Q8N114 240 aa7.76□□□□□ -1.17
SUB1-204ENST00000504016 CORO1BQ9BR76 489 aa7.76□□□□□ -1.17
SUB1-204ENST00000504016 RAB6AP20340 208 aa7.75□□□□□ -1.17
SUB1-204ENST00000504016 ECM1Q16610 540 aa7.75□□□□□ -1.17
SUB1-204ENST00000504016 ZAR1Q86SH2 424 aa7.75□□□□□ -1.17
SUB1-204ENST00000504016 EZH1Q92800 747 aaPredicted RBP7.75□□□□□ -1.17
SUB1-204ENST00000504016 PRKAG2Q9UGJ0 569 aa7.75□□□□□ -1.17
SUB1-204ENST00000504016 ACTL7BQ9Y614 415 aa7.75□□□□□ -1.17
SUB1-204ENST00000504016 CYP26A1O43174 497 aa7.74□□□□□ -1.17
SUB1-204ENST00000504016 NFICP08651 508 aa7.74□□□□□ -1.17
SUB1-204ENST00000504016 ADMP35318 185 aa7.74□□□□□ -1.17
SUB1-204ENST00000504016 ARHGAP4P98171 946 aa7.74□□□□□ -1.17
SUB1-204ENST00000504016 ORC1Q13415 861 aa7.74□□□□□ -1.17
SUB1-204ENST00000504016 MAP7Q14244 749 aa7.74□□□□□ -1.17
SUB1-204ENST00000504016 TMC1Q8TDI8 760 aa7.74□□□□□ -1.17
SUB1-204ENST00000504016 NPHS2Q9NP85 383 aa7.74□□□□□ -1.17
SUB1-204ENST00000504016 B3GALT4O96024 378 aa7.73□□□□□ -1.17
SUB1-204ENST00000504016 MSMPQ1L6U9 139 aa7.73□□□□□ -1.17
SUB1-204ENST00000504016 FMNL2Q96PY5 1086 aa7.73□□□□□ -1.17
SUB1-204ENST00000504016 ZNF576Q9H609 170 aa7.73□□□□□ -1.17
SUB1-204ENST00000504016 AP4E1Q9UPM8 1137 aa7.73□□□□□ -1.17
SUB1-204ENST00000504016 RNF114Q9Y508 228 aa7.73□□□□□ -1.17
SUB1-204ENST00000504016 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.72□□□□□ -1.17
SUB1-204ENST00000504016 FAM170BA6NMN3 283 aa7.72□□□□□ -1.17
SUB1-204ENST00000504016 ECEL1O95672 775 aa7.72□□□□□ -1.17
SUB1-204ENST00000504016 ITPKAP23677 461 aa7.72□□□□□ -1.17
SUB1-204ENST00000504016 ASPAP45381 313 aa7.72□□□□□ -1.17
SUB1-204ENST00000504016 PDE3AQ14432 1141 aa7.72□□□□□ -1.17
SUB1-204ENST00000504016 DUSP27Q5VZP5 1158 aa7.72□□□□□ -1.17
SUB1-204ENST00000504016 CITED4Q96RK1 184 aa7.72□□□□□ -1.17
SUB1-204ENST00000504016 FAM129BQ96TA1 746 aa7.72□□□□□ -1.17
SUB1-204ENST00000504016 TRIM56Q9BRZ2 755 aaKnown RBP7.72□□□□□ -1.17
SUB1-204ENST00000504016 CCDC39Q9UFE4 941 aa7.72□□□□□ -1.17
SUB1-204ENST00000504016 GADD45BO75293 160 aaPredicted RBP7.71□□□□□ -1.18
SUB1-204ENST00000504016 ABI1Q8IZP0 508 aa7.71□□□□□ -1.18
SUB1-204ENST00000504016 NIF3L1Q9GZT8 377 aa7.71□□□□□ -1.18
SUB1-204ENST00000504016 SEMA6CQ9H3T2 930 aa7.71□□□□□ -1.18
SUB1-204ENST00000504016 FAM105AQ9NUU6 356 aa7.71□□□□□ -1.18
SUB1-204ENST00000504016 ADGRE2Q9UHX3 823 aa7.71□□□□□ -1.18
SUB1-204ENST00000504016 AOC2O75106 756 aa7.7□□□□□ -1.18
SUB1-204ENST00000504016 CYP27A1Q02318 531 aa7.7□□□□□ -1.18
SUB1-204ENST00000504016 AP3B2Q13367 1082 aa7.7□□□□□ -1.18
SUB1-204ENST00000504016 VSIG10LQ86VR7 867 aa7.7□□□□□ -1.18
SUB1-204ENST00000504016 KRTAP19-1Q8IUB9 90 aa7.7□□□□□ -1.18
SUB1-204ENST00000504016 TP53INP2Q8IXH6 220 aa7.7□□□□□ -1.18
SUB1-204ENST00000504016 GATA6Q92908 595 aa7.7□□□□□ -1.18
SUB1-204ENST00000504016 CCDC74AQ96AQ1 378 aa7.7□□□□□ -1.18
SUB1-204ENST00000504016 FBXL18Q96ME1 805 aa7.7□□□□□ -1.18
SUB1-204ENST00000504016 DNAJC25Q9H1X3 360 aa7.7□□□□□ -1.18
SUB1-204ENST00000504016 ACSS3Q9H6R3 686 aa7.7□□□□□ -1.18
SUB1-204ENST00000504016 EIF1AYO14602 144 aaKnown RBP7.69□□□□□ -1.18
SUB1-204ENST00000504016 PRNPP04156 253 aa7.69□□□□□ -1.18
SUB1-204ENST00000504016 PTPN12Q05209 780 aaKnown RBP7.69□□□□□ -1.18
SUB1-204ENST00000504016 LRRC4CQ9HCJ2 640 aa7.69□□□□□ -1.18
SUB1-204ENST00000504016 ABCB6Q9NP58 842 aa7.69□□□□□ -1.18
SUB1-204ENST00000504016 BSDC1Q9NW68 430 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms