RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 GLIPR1L2Q4G1C9 344 aa8.74□□□□□ -1.01
CPNE4-202ENST00000502818 CAVIN4Q5BKX8 364 aa8.74□□□□□ -1.01
CPNE4-202ENST00000502818 LCORLQ8N3X6 602 aa8.74□□□□□ -1.01
CPNE4-202ENST00000502818 CRAMP1Q96RY5 1269 aa8.74□□□□□ -1.01
CPNE4-202ENST00000502818 EPB41L4AQ9HCS5 686 aaPredicted RBP8.74□□□□□ -1.01
CPNE4-202ENST00000502818 PPEF1O14829 653 aaPredicted RBP8.73□□□□□ -1.01
CPNE4-202ENST00000502818 MBD4O95243 580 aa8.73□□□□□ -1.01
CPNE4-202ENST00000502818 DYNLL1P63167 89 aaKnown RBP8.73□□□□□ -1.01
CPNE4-202ENST00000502818 SF3B2Q13435 895 aaKnown RBP8.73□□□□□ -1.01
CPNE4-202ENST00000502818 UBE3CQ15386 1083 aa8.73□□□□□ -1.01
CPNE4-202ENST00000502818 CHST3Q7LGC8 479 aa8.73□□□□□ -1.01
CPNE4-202ENST00000502818 TBC1D16Q8TBP0 767 aa8.73□□□□□ -1.01
CPNE4-202ENST00000502818 ZNF622Q969S3 477 aaKnown RBP eCLIP8.73□□□□□ -1.01
CPNE4-202ENST00000502818 STRBPQ96SI9 672 aaKnown RBP8.73□□□□□ -1.01
CPNE4-202ENST00000502818 DSCC1Q9BVC3 393 aa8.73□□□□□ -1.01
CPNE4-202ENST00000502818 LRP2BPQ9P2M1 347 aa8.73□□□□□ -1.01
CPNE4-202ENST00000502818 XDHP47989 1333 aa8.73□□□□□ -1.01
CPNE4-202ENST00000502818 RIMBP2O15034 1052 aa8.72□□□□□ -1.01
CPNE4-202ENST00000502818 BBOX1O75936 387 aa8.72□□□□□ -1.01
CPNE4-202ENST00000502818 ZFYP08048 801 aaPredicted RBP8.72□□□□□ -1.01
CPNE4-202ENST00000502818 CYP7A1P22680 504 aa8.72□□□□□ -1.01
CPNE4-202ENST00000502818 TOB2Q14106 344 aaPredicted RBP8.72□□□□□ -1.01
CPNE4-202ENST00000502818 C2CD5Q86YS7 1000 aa8.72□□□□□ -1.01
CPNE4-202ENST00000502818 CHAMP1Q96JM3 812 aa8.72□□□□□ -1.01
CPNE4-202ENST00000502818 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.72□□□□□ -1.01
CPNE4-202ENST00000502818 GPHNQ9NQX3 736 aaPredicted RBP8.72□□□□□ -1.01
CPNE4-202ENST00000502818 PDRG1Q9NUG6 133 aa8.72□□□□□ -1.01
CPNE4-202ENST00000502818 RAI14Q9P0K7 980 aa8.72□□□□□ -1.01
CPNE4-202ENST00000502818 FRAT2O75474 233 aaPredicted RBP8.72□□□□□ -1.01
CPNE4-202ENST00000502818 NPR1P16066 1061 aa8.72□□□□□ -1.01
CPNE4-202ENST00000502818 ZKSCAN1P17029 563 aaPredicted RBP8.72□□□□□ -1.01
CPNE4-202ENST00000502818 MAP3K12Q12852 859 aa8.72□□□□□ -1.01
CPNE4-202ENST00000502818 TSGA10IPQ3SY00 556 aa8.72□□□□□ -1.01
CPNE4-202ENST00000502818 GGA1Q9UJY5 639 aa8.72□□□□□ -1.01
CPNE4-202ENST00000502818 TPCN1Q9ULQ1 816 aa8.72□□□□□ -1.01
CPNE4-202ENST00000502818 LEMD3Q9Y2U8 911 aa8.72□□□□□ -1.01
CPNE4-202ENST00000502818 E7EWF7 191 aa8.71□□□□□ -1.01
CPNE4-202ENST00000502818 C6orf229H3BNL8 230 aa8.71□□□□□ -1.01
CPNE4-202ENST00000502818 ZBTB7AO95365 584 aa8.71□□□□□ -1.01
CPNE4-202ENST00000502818 RPS6KB1P23443 525 aa8.71□□□□□ -1.01
CPNE4-202ENST00000502818 MECOMQ03112 1051 aa8.71□□□□□ -1.01
CPNE4-202ENST00000502818 TBC1D10CQ8IV04 446 aa8.71□□□□□ -1.01
CPNE4-202ENST00000502818 SP8Q8IXZ3 490 aa8.71□□□□□ -1.01
CPNE4-202ENST00000502818 STK11IPQ8N1F8 1099 aa8.71□□□□□ -1.01
CPNE4-202ENST00000502818 NECAB1Q8N987 351 aa8.71□□□□□ -1.01
CPNE4-202ENST00000502818 TDRD7Q8NHU6 1098 aaKnown RBP8.71□□□□□ -1.01
CPNE4-202ENST00000502818 SDR42E1Q8WUS8 393 aa8.71□□□□□ -1.01
CPNE4-202ENST00000502818 MXD3Q9BW11 206 aa8.71□□□□□ -1.01
CPNE4-202ENST00000502818 TM6SF1Q9BZW5 370 aa8.71□□□□□ -1.01
CPNE4-202ENST00000502818 KCNQ5Q9NR82 932 aa8.71□□□□□ -1.01
CPNE4-202ENST00000502818 GNL3LQ9NVN8 582 aaKnown RBP8.71□□□□□ -1.01
CPNE4-202ENST00000502818 ATP6V0A2Q9Y487 856 aa8.71□□□□□ -1.01
CPNE4-202ENST00000502818 CYP46A1Q9Y6A2 500 aa8.71□□□□□ -1.01
CPNE4-202ENST00000502818 MYH7P12883 1935 aa8.71□□□□□ -1.02
CPNE4-202ENST00000502818 CACNA1SQ13698 1873 aa8.71□□□□□ -1.02
CPNE4-202ENST00000502818 DOCK2Q92608 1830 aa8.71□□□□□ -1.02
CPNE4-202ENST00000502818 GSG1L2A8MUP6 293 aa8.71□□□□□ -1.02
CPNE4-202ENST00000502818 APPP05067 770 aa8.71□□□□□ -1.02
CPNE4-202ENST00000502818 HSP90AA1P07900 732 aaKnown RBP8.71□□□□□ -1.02
CPNE4-202ENST00000502818 PDE6BP35913 854 aa8.71□□□□□ -1.02
CPNE4-202ENST00000502818 ME3Q16798 604 aa8.71□□□□□ -1.02
CPNE4-202ENST00000502818 AIDAQ96BJ3 306 aa8.71□□□□□ -1.02
CPNE4-202ENST00000502818 NSUN4Q96CB9 384 aaKnown RBP8.71□□□□□ -1.02
CPNE4-202ENST00000502818 MASTLQ96GX5 879 aa8.71□□□□□ -1.02
CPNE4-202ENST00000502818 RIOK1Q9BRS2 568 aaKnown RBP8.71□□□□□ -1.02
CPNE4-202ENST00000502818 CD209Q9NNX6 404 aa8.71□□□□□ -1.02
CPNE4-202ENST00000502818 PODXL2Q9NZ53 605 aa8.71□□□□□ -1.02
CPNE4-202ENST00000502818 DUOX1Q9NRD9 1551 aa8.7□□□□□ -1.02
CPNE4-202ENST00000502818 ATP2B4P23634 1241 aa8.7□□□□□ -1.02
CPNE4-202ENST00000502818 CTDSPL2Q05D32 466 aa8.7□□□□□ -1.02
CPNE4-202ENST00000502818 CUL4AQ13619 759 aa8.7□□□□□ -1.02
CPNE4-202ENST00000502818 DIXDC1Q155Q3 683 aa8.7□□□□□ -1.02
CPNE4-202ENST00000502818 DOK7Q18PE1 504 aa8.7□□□□□ -1.02
CPNE4-202ENST00000502818 FOXD4L5Q5VV16 416 aaPredicted RBP8.7□□□□□ -1.02
CPNE4-202ENST00000502818 ZSCAN25Q6NSZ9 544 aa8.7□□□□□ -1.02
CPNE4-202ENST00000502818 BLOC1S2Q6QNY1 142 aa8.7□□□□□ -1.02
CPNE4-202ENST00000502818 FOXD4L4Q8WXT5 416 aaPredicted RBP8.7□□□□□ -1.02
CPNE4-202ENST00000502818 NEK1Q96PY6 1258 aa8.7□□□□□ -1.02
CPNE4-202ENST00000502818 ATF5Q9Y2D1 282 aaPredicted RBP8.7□□□□□ -1.02
CPNE4-202ENST00000502818 ZDHHC9Q9Y397 364 aa8.7□□□□□ -1.02
CPNE4-202ENST00000502818 LTBP1Q14766 1721 aa8.7□□□□□ -1.02
CPNE4-202ENST00000502818 CYP2D7A0A087X1C5 515 aa8.69□□□□□ -1.02
CPNE4-202ENST00000502818 RNF20Q5VTR2 975 aa8.69□□□□□ -1.02
CPNE4-202ENST00000502818 C15orf52Q6ZUT6 534 aaKnown RBP8.69□□□□□ -1.02
CPNE4-202ENST00000502818 TICAM2Q86XR7 235 aa8.69□□□□□ -1.02
CPNE4-202ENST00000502818 IFNL3Q8IZI9 196 aa8.69□□□□□ -1.02
CPNE4-202ENST00000502818 SCUBE2Q9NQ36 999 aa8.69□□□□□ -1.02
CPNE4-202ENST00000502818 CHMP5Q9NZZ3 219 aa8.69□□□□□ -1.02
CPNE4-202ENST00000502818 SLX4Q8IY92 1834 aa8.69□□□□□ -1.02
CPNE4-202ENST00000502818 ANTXR2P58335 489 aa8.69□□□□□ -1.02
CPNE4-202ENST00000502818 EXOSC10Q01780 885 aaKnown RBP8.69□□□□□ -1.02
CPNE4-202ENST00000502818 STK3Q13188 491 aa8.69□□□□□ -1.02
CPNE4-202ENST00000502818 LRRFIP1Q32MZ4 808 aaKnown RBP8.69□□□□□ -1.02
CPNE4-202ENST00000502818 NAA16Q6N069 864 aaPredicted RBP8.69□□□□□ -1.02
CPNE4-202ENST00000502818 Q6ZUG5 572 aa8.69□□□□□ -1.02
CPNE4-202ENST00000502818 CCDC83Q8IWF9 413 aa8.69□□□□□ -1.02
CPNE4-202ENST00000502818 MPNDQ8N594 471 aa8.69□□□□□ -1.02
CPNE4-202ENST00000502818 C7orf43Q8WVR3 580 aa8.69□□□□□ -1.02
CPNE4-202ENST00000502818 UPF1Q92900 1129 aaKnown RBP eCLIP8.69□□□□□ -1.02
CPNE4-202ENST00000502818 AATFQ9NY61 560 aaKnown RBP eCLIP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms