RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 CNPY2Q9Y2B0 182 aa10.53□□□□□ -0.72
FN1-227ENST00000498719 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.53□□□□□ -0.72
FN1-227ENST00000498719 WDR33Q9C0J8 1336 aaKnown RBP10.52□□□□□ -0.72
FN1-227ENST00000498719 HEG1Q9ULI3 1381 aa10.52□□□□□ -0.73
FN1-227ENST00000498719 GRM8O00222 908 aa10.52□□□□□ -0.73
FN1-227ENST00000498719 FGAP02671 866 aa10.52□□□□□ -0.73
FN1-227ENST00000498719 MYL6BP14649 208 aa10.52□□□□□ -0.73
FN1-227ENST00000498719 PIP4K2AP48426 406 aaPredicted RBP10.52□□□□□ -0.73
FN1-227ENST00000498719 CABLES1Q8TDN4 633 aa10.52□□□□□ -0.73
FN1-227ENST00000498719 JARID2Q92833 1246 aaPredicted RBP10.52□□□□□ -0.73
FN1-227ENST00000498719 EAF2Q96CJ1 260 aaPredicted RBP10.52□□□□□ -0.73
FN1-227ENST00000498719 FAM227BQ96M60 508 aa10.52□□□□□ -0.73
FN1-227ENST00000498719 DCTN4Q9UJW0 460 aa10.52□□□□□ -0.73
FN1-227ENST00000498719 SIPA1L3O60292 1781 aaPredicted RBP10.52□□□□□ -0.73
FN1-227ENST00000498719 ALDH1L1O75891 902 aa10.52□□□□□ -0.73
FN1-227ENST00000498719 SYT1P21579 422 aa10.52□□□□□ -0.73
FN1-227ENST00000498719 ARID5AQ03989 594 aa10.52□□□□□ -0.73
FN1-227ENST00000498719 ICE2Q659A1 982 aa10.52□□□□□ -0.73
FN1-227ENST00000498719 PCGF5Q86SE9 256 aa10.52□□□□□ -0.73
FN1-227ENST00000498719 JAKMIP1Q96N16 626 aaKnown RBP10.52□□□□□ -0.73
FN1-227ENST00000498719 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.52□□□□□ -0.73
FN1-227ENST00000498719 LIMCH1Q9UPQ0 1083 aa10.52□□□□□ -0.73
FN1-227ENST00000498719 IGKV5-2P06315 115 aa10.51□□□□□ -0.73
FN1-227ENST00000498719 MSNP26038 577 aaKnown RBP10.51□□□□□ -0.73
FN1-227ENST00000498719 MTMR3Q13615 1198 aa10.51□□□□□ -0.73
FN1-227ENST00000498719 CCDC83Q8IWF9 413 aa10.51□□□□□ -0.73
FN1-227ENST00000498719 DEPDC4Q8N2C3 294 aa10.51□□□□□ -0.73
FN1-227ENST00000498719 KANSL2Q9H9L4 492 aa10.51□□□□□ -0.73
FN1-227ENST00000498719 HYPKQ9NX55 129 aa10.51□□□□□ -0.73
FN1-227ENST00000498719 FAM163BP0C2L3 166 aa10.5□□□□□ -0.73
FN1-227ENST00000498719 ARHGAP4P98171 946 aa10.5□□□□□ -0.73
FN1-227ENST00000498719 SEMA3FQ13275 785 aa10.5□□□□□ -0.73
FN1-227ENST00000498719 RSBN1LQ6PCB5 846 aaPredicted RBP10.5□□□□□ -0.73
FN1-227ENST00000498719 LINS1Q8NG48 757 aa10.5□□□□□ -0.73
FN1-227ENST00000498719 ENOX1Q8TC92 643 aaKnown RBP10.5□□□□□ -0.73
FN1-227ENST00000498719 DDX17Q92841 729 aaKnown RBP10.5□□□□□ -0.73
FN1-227ENST00000498719 TSPYL2Q9H2G4 693 aaPredicted RBP10.5□□□□□ -0.73
FN1-227ENST00000498719 CTDP1Q9Y5B0 961 aaPredicted RBP10.5□□□□□ -0.73
FN1-227ENST00000498719 NCAPD2Q15021 1401 aa10.5□□□□□ -0.73
FN1-227ENST00000498719 USP17L15C9J2P7 530 aa10.5□□□□□ -0.73
FN1-227ENST00000498719 USP17L10C9JJH3 530 aa10.5□□□□□ -0.73
FN1-227ENST00000498719 USP17L13C9JLJ4 530 aa10.5□□□□□ -0.73
FN1-227ENST00000498719 USP17L12C9JPN9 530 aa10.5□□□□□ -0.73
FN1-227ENST00000498719 USP17L11C9JVI0 530 aa10.5□□□□□ -0.73
FN1-227ENST00000498719 USP17L21D6R901 530 aa10.5□□□□□ -0.73
FN1-227ENST00000498719 USP17L18D6R9N7 530 aa10.5□□□□□ -0.73
FN1-227ENST00000498719 USP17L22D6RA61 530 aa10.5□□□□□ -0.73
FN1-227ENST00000498719 USP17L17D6RBQ6 530 aa10.5□□□□□ -0.73
FN1-227ENST00000498719 USP17L19D6RCP7 530 aa10.5□□□□□ -0.73
FN1-227ENST00000498719 USP17L20D6RJB6 530 aa10.5□□□□□ -0.73
FN1-227ENST00000498719 SPTLC1O15269 473 aa10.5□□□□□ -0.73
FN1-227ENST00000498719 STX6O43752 255 aa10.5□□□□□ -0.73
FN1-227ENST00000498719 ZSCAN22P10073 491 aaPredicted RBP10.5□□□□□ -0.73
FN1-227ENST00000498719 USP17L24Q0WX57 530 aa10.5□□□□□ -0.73
FN1-227ENST00000498719 KRT28Q7Z3Y7 464 aa10.5□□□□□ -0.73
FN1-227ENST00000498719 METTL3Q86U44 580 aaKnown RBP10.5□□□□□ -0.73
FN1-227ENST00000498719 BOLA2Q9H3K6 86 aa10.5□□□□□ -0.73
FN1-227ENST00000498719 PCDHGB7Q9Y5F8 929 aa10.5□□□□□ -0.73
FN1-227ENST00000498719 TAF6LQ9Y6J9 622 aa10.5□□□□□ -0.73
FN1-227ENST00000498719 C5P01031 1676 aa10.5□□□□□ -0.73
FN1-227ENST00000498719 SLIT3O75094 1523 aa10.5□□□□□ -0.73
FN1-227ENST00000498719 MOXD2PA6NHM9 499 aa10.49□□□□□ -0.73
FN1-227ENST00000498719 FIBPO43427 364 aa10.49□□□□□ -0.73
FN1-227ENST00000498719 ICMTO60725 284 aa10.49□□□□□ -0.73
FN1-227ENST00000498719 ST3GAL1Q11201 340 aa10.49□□□□□ -0.73
FN1-227ENST00000498719 NMIQ13287 307 aaPredicted RBP10.49□□□□□ -0.73
FN1-227ENST00000498719 EPHA10Q5JZY3 1008 aa10.49□□□□□ -0.73
FN1-227ENST00000498719 ZNF790Q6PG37 636 aa10.49□□□□□ -0.73
FN1-227ENST00000498719 NECAB1Q8N987 351 aa10.49□□□□□ -0.73
FN1-227ENST00000498719 NFATC2IPQ8NCF5 419 aa10.49□□□□□ -0.73
FN1-227ENST00000498719 EDC3Q96F86 508 aaKnown RBP10.49□□□□□ -0.73
FN1-227ENST00000498719 TCEANC2Q96MN5 208 aa10.49□□□□□ -0.73
FN1-227ENST00000498719 CEP63Q96MT8 703 aa10.49□□□□□ -0.73
FN1-227ENST00000498719 TSPY26PQ9H489 355 aa10.49□□□□□ -0.73
FN1-227ENST00000498719 DDX21Q9NR30 783 aaKnown RBP eCLIP10.49□□□□□ -0.73
FN1-227ENST00000498719 PDRG1Q9NUG6 133 aa10.49□□□□□ -0.73
FN1-227ENST00000498719 SMC3Q9UQE7 1217 aa10.49□□□□□ -0.73
FN1-227ENST00000498719 SCINQ9Y6U3 715 aa10.49□□□□□ -0.73
FN1-227ENST00000498719 GJB2P29033 226 aa10.49□□□□□ -0.73
FN1-227ENST00000498719 NECTIN1Q15223 517 aa10.49□□□□□ -0.73
FN1-227ENST00000498719 ZNF394Q53GI3 561 aa10.49□□□□□ -0.73
FN1-227ENST00000498719 GLYCTKQ8IVS8 523 aa10.49□□□□□ -0.73
FN1-227ENST00000498719 MPNDQ8N594 471 aa10.49□□□□□ -0.73
FN1-227ENST00000498719 PDILTQ8N807 584 aa10.49□□□□□ -0.73
FN1-227ENST00000498719 RUFY2Q8WXA3 655 aa10.49□□□□□ -0.73
FN1-227ENST00000498719 AKT1S1Q96B36 256 aa10.49□□□□□ -0.73
FN1-227ENST00000498719 AVENQ9NQS1 362 aaPredicted RBP10.49□□□□□ -0.73
FN1-227ENST00000498719 CCDC171Q6TFL3 1326 aa10.49□□□□□ -0.73
FN1-227ENST00000498719 A0A0D9SFI3 127 aa10.48□□□□□ -0.73
FN1-227ENST00000498719 G3BP1Q13283 466 aaKnown RBP eCLIP10.48□□□□□ -0.731e-323■□□□□ 8.7
FN1-227ENST00000498719 ME3Q16798 604 aa10.48□□□□□ -0.73
FN1-227ENST00000498719 FERMT3Q86UX7 667 aa10.48□□□□□ -0.73
FN1-227ENST00000498719 ERC1Q8IUD2 1116 aa10.48□□□□□ -0.73
FN1-227ENST00000498719 TTC30BQ8N4P2 665 aa10.48□□□□□ -0.73
FN1-227ENST00000498719 NOL7Q9UMY1 257 aaKnown RBP10.48□□□□□ -0.73
FN1-227ENST00000498719 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.48□□□□□ -0.73
FN1-227ENST00000498719 RBM8AQ9Y5S9 174 aaKnown RBP10.48□□□□□ -0.73
FN1-227ENST00000498719 USP17L3A6NCW0 530 aa10.48□□□□□ -0.73
FN1-227ENST00000498719 USP17L4A6NCW7 530 aa10.48□□□□□ -0.73
FN1-227ENST00000498719 F13A1P00488 732 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms