RNA–Protein interactions for RNA: ENST00000498694.1

CTPS1-212, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 599 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-212ENST00000498694 HOXB7P09629 217 aa5.24□□□□□ -1.57
CTPS1-212ENST00000498694 CABP4P57796 275 aa5.24□□□□□ -1.57
CTPS1-212ENST00000498694 EIF4A1P60842 406 aaKnown RBP5.24□□□□□ -1.57
CTPS1-212ENST00000498694 GNAI1P63096 354 aa5.24□□□□□ -1.57
CTPS1-212ENST00000498694 SLFN5Q08AF3 891 aa5.24□□□□□ -1.57
CTPS1-212ENST00000498694 TRIM50Q86XT4 487 aa5.24□□□□□ -1.57
CTPS1-212ENST00000498694 RETREG2Q8NC44 543 aa5.24□□□□□ -1.57
CTPS1-212ENST00000498694 TSR2Q969E8 191 aaKnown RBP5.24□□□□□ -1.57
CTPS1-212ENST00000498694 ZFP42Q96MM3 310 aa5.24□□□□□ -1.57
CTPS1-212ENST00000498694 SLC4A9Q96Q91 983 aa5.24□□□□□ -1.57
CTPS1-212ENST00000498694 INSM2Q96T92 566 aaPredicted RBP5.24□□□□□ -1.57
CTPS1-212ENST00000498694 PDGFDQ9GZP0 370 aaPredicted RBP5.24□□□□□ -1.57
CTPS1-212ENST00000498694 GMPR2Q9P2T1 348 aaKnown RBP5.24□□□□□ -1.57
CTPS1-212ENST00000498694 TSPYL4Q9UJ04 414 aa5.24□□□□□ -1.57
CTPS1-212ENST00000498694 ASAP1Q9ULH1 1129 aa5.24□□□□□ -1.57
CTPS1-212ENST00000498694 CACNA1FO60840 1977 aa5.24□□□□□ -1.57
CTPS1-212ENST00000498694 CNTNAP4Q9C0A0 1308 aa5.23□□□□□ -1.57
CTPS1-212ENST00000498694 NRXN2Q9P2S2 1712 aa5.23□□□□□ -1.57
CTPS1-212ENST00000498694 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.23□□□□□ -1.57
CTPS1-212ENST00000498694 LOC102724428A0A0B4J2F2 783 aa5.23□□□□□ -1.57
CTPS1-212ENST00000498694 A0A1W2PRU2 124 aa5.23□□□□□ -1.57
CTPS1-212ENST00000498694 KCNQ3O43525 872 aa5.23□□□□□ -1.57
CTPS1-212ENST00000498694 GNRH1P01148 92 aa5.23□□□□□ -1.57
CTPS1-212ENST00000498694 ATP1A2P50993 1020 aa5.23□□□□□ -1.57
CTPS1-212ENST00000498694 SIK1P57059 783 aa5.23□□□□□ -1.57
CTPS1-212ENST00000498694 SLC39A6Q13433 755 aa5.23□□□□□ -1.57
CTPS1-212ENST00000498694 TAF7Q15545 349 aaPredicted RBP5.23□□□□□ -1.57
CTPS1-212ENST00000498694 TXNRD1Q16881 649 aa5.23□□□□□ -1.57
CTPS1-212ENST00000498694 KRT24Q2M2I5 525 aa5.23□□□□□ -1.57
CTPS1-212ENST00000498694 TMCO4Q5TGY1 634 aa5.23□□□□□ -1.57
CTPS1-212ENST00000498694 OGFOD1Q8N543 542 aa5.23□□□□□ -1.57
CTPS1-212ENST00000498694 KDF1Q8NAX2 398 aaPredicted RBP5.23□□□□□ -1.57
CTPS1-212ENST00000498694 SMARCC1Q92922 1105 aaPredicted RBP5.23□□□□□ -1.57
CTPS1-212ENST00000498694 SYTL4Q96C24 671 aaPredicted RBP5.23□□□□□ -1.57
CTPS1-212ENST00000498694 ZNF496Q96IT1 587 aaPredicted RBP5.23□□□□□ -1.57
CTPS1-212ENST00000498694 ZNF594Q96JF6 807 aaPredicted RBP5.23□□□□□ -1.57
CTPS1-212ENST00000498694 NLRP3Q96P20 1036 aa5.23□□□□□ -1.57
CTPS1-212ENST00000498694 VRTNQ9H8Y1 702 aa5.23□□□□□ -1.57
CTPS1-212ENST00000498694 ERBB4Q15303 1308 aa5.23□□□□□ -1.57
CTPS1-212ENST00000498694 COL15A1P39059 1388 aa5.22□□□□□ -1.57
CTPS1-212ENST00000498694 BTBD11A6QL63 1104 aa5.22□□□□□ -1.57
CTPS1-212ENST00000498694 SPINT1O43278 529 aa5.22□□□□□ -1.57
CTPS1-212ENST00000498694 RASA1P20936 1047 aa5.22□□□□□ -1.57
CTPS1-212ENST00000498694 GDF10P55107 478 aa5.22□□□□□ -1.57
CTPS1-212ENST00000498694 ITPK1Q13572 414 aa5.22□□□□□ -1.57
CTPS1-212ENST00000498694 SLC15A2Q16348 729 aa5.22□□□□□ -1.57
CTPS1-212ENST00000498694 LRP10Q7Z4F1 713 aa5.22□□□□□ -1.57
CTPS1-212ENST00000498694 TTC5Q8N0Z6 440 aa5.22□□□□□ -1.57
CTPS1-212ENST00000498694 LINC00116Q8NCU8 138 aa5.22□□□□□ -1.57
CTPS1-212ENST00000498694 FMNL2Q96PY5 1086 aa5.22□□□□□ -1.57
CTPS1-212ENST00000498694 MYH16Q9H6N6 1097 aa5.22□□□□□ -1.57
CTPS1-212ENST00000498694 SENP2Q9HC62 589 aa5.22□□□□□ -1.57
CTPS1-212ENST00000498694 LRRC4BQ9NT99 713 aa5.22□□□□□ -1.57
CTPS1-212ENST00000498694 DNAAF2Q9NVR5 837 aaKnown RBP5.22□□□□□ -1.57
CTPS1-212ENST00000498694 SERTAD1Q9UHV2 236 aa5.22□□□□□ -1.57
CTPS1-212ENST00000498694 RBM19Q9Y4C8 960 aaKnown RBP5.22□□□□□ -1.57
CTPS1-212ENST00000498694 PCDHGA11Q9Y5H2 935 aa5.22□□□□□ -1.57
CTPS1-212ENST00000498694 KIAA1551Q9HCM1 1747 aa5.21□□□□□ -1.58
CTPS1-212ENST00000498694 PRAMEF22A3QJZ6 481 aa5.21□□□□□ -1.58
CTPS1-212ENST00000498694 FIGNL2A6NMB9 653 aa5.21□□□□□ -1.58
CTPS1-212ENST00000498694 TTLL8A6PVC2 850 aa5.21□□□□□ -1.58
CTPS1-212ENST00000498694 CT47B1P0C2W7 299 aaPredicted RBP5.21□□□□□ -1.58
CTPS1-212ENST00000498694 YY1P25490 414 aa5.21□□□□□ -1.58
CTPS1-212ENST00000498694 CTSOP43234 321 aaPredicted RBP5.21□□□□□ -1.58
CTPS1-212ENST00000498694 CLDN10P78369 228 aa5.21□□□□□ -1.58
CTPS1-212ENST00000498694 CLN3Q13286 438 aa5.21□□□□□ -1.58
CTPS1-212ENST00000498694 ZNF827Q17R98 1081 aa5.21□□□□□ -1.58
CTPS1-212ENST00000498694 SLC27A3Q5K4L6 730 aa5.21□□□□□ -1.58
CTPS1-212ENST00000498694 DNAJC10Q8IXB1 793 aa5.21□□□□□ -1.58
CTPS1-212ENST00000498694 TSPYL6Q8N831 410 aa5.21□□□□□ -1.58
CTPS1-212ENST00000498694 TPCN2Q8NHX9 752 aa5.21□□□□□ -1.58
CTPS1-212ENST00000498694 CNKSR1Q969H4 720 aa5.21□□□□□ -1.58
CTPS1-212ENST00000498694 KIFC2Q96AC6 838 aa5.21□□□□□ -1.58
CTPS1-212ENST00000498694 YTHDC1Q96MU7 727 aaKnown RBP5.21□□□□□ -1.58
CTPS1-212ENST00000498694 SYT17Q9BSW7 474 aa5.21□□□□□ -1.58
CTPS1-212ENST00000498694 ETNK1Q9HBU6 452 aa5.21□□□□□ -1.58
CTPS1-212ENST00000498694 CCNL1Q9UK58 526 aaPredicted RBP5.21□□□□□ -1.58
CTPS1-212ENST00000498694 KIAA1024Q9UPX6 916 aa5.21□□□□□ -1.58
CTPS1-212ENST00000498694 ZBTB1Q9Y2K1 713 aa5.21□□□□□ -1.58
CTPS1-212ENST00000498694 ATP10DQ9P241 1426 aa5.21□□□□□ -1.58
CTPS1-212ENST00000498694 TNRC6CQ9HCJ0 1690 aaKnown RBP5.21□□□□□ -1.58
CTPS1-212ENST00000498694 AFDNP55196 1824 aaKnown RBP5.2□□□□□ -1.58
CTPS1-212ENST00000498694 SOBPA7XYQ1 873 aa5.2□□□□□ -1.58
CTPS1-212ENST00000498694 POTECB2RU33 542 aa5.2□□□□□ -1.58
CTPS1-212ENST00000498694 USP17L15C9J2P7 530 aa5.2□□□□□ -1.58
CTPS1-212ENST00000498694 USP17L10C9JJH3 530 aa5.2□□□□□ -1.58
CTPS1-212ENST00000498694 USP17L13C9JLJ4 530 aa5.2□□□□□ -1.58
CTPS1-212ENST00000498694 USP17L12C9JPN9 530 aa5.2□□□□□ -1.58
CTPS1-212ENST00000498694 USP17L11C9JVI0 530 aa5.2□□□□□ -1.58
CTPS1-212ENST00000498694 USP17L21D6R901 530 aa5.2□□□□□ -1.58
CTPS1-212ENST00000498694 USP17L18D6R9N7 530 aa5.2□□□□□ -1.58
CTPS1-212ENST00000498694 USP17L22D6RA61 530 aa5.2□□□□□ -1.58
CTPS1-212ENST00000498694 USP17L17D6RBQ6 530 aa5.2□□□□□ -1.58
CTPS1-212ENST00000498694 USP17L19D6RCP7 530 aa5.2□□□□□ -1.58
CTPS1-212ENST00000498694 USP17L20D6RJB6 530 aa5.2□□□□□ -1.58
CTPS1-212ENST00000498694 MAN1A2O60476 641 aa5.2□□□□□ -1.58
CTPS1-212ENST00000498694 PTCD1O75127 700 aaKnown RBP5.2□□□□□ -1.58
CTPS1-212ENST00000498694 IL2RAP01589 272 aa5.2□□□□□ -1.58
CTPS1-212ENST00000498694 SNRPA1P09661 255 aaKnown RBP5.2□□□□□ -1.58
CTPS1-212ENST00000498694 CYP19A1P11511 503 aaPredicted RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms