RNA–Protein interactions for RNA: ENST00000498367.1

PDCD4-211, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 975 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-211ENST00000498367 KLF16Q9BXK1 252 aaPredicted RBP8.66□□□□□ -1.02
PDCD4-211ENST00000498367 YY1AP1Q9H869 796 aa8.66□□□□□ -1.02
PDCD4-211ENST00000498367 STRN4Q9NRL3 753 aa8.66□□□□□ -1.02
PDCD4-211ENST00000498367 CXXC1Q9P0U4 656 aaPredicted RBP8.66□□□□□ -1.02
PDCD4-211ENST00000498367 SPG7Q9UQ90 795 aa8.66□□□□□ -1.02
PDCD4-211ENST00000498367 PCDHB15Q9Y5E8 787 aa8.66□□□□□ -1.02
PDCD4-211ENST00000498367 EMILIN1Q9Y6C2 1016 aa8.66□□□□□ -1.02
PDCD4-211ENST00000498367 IQCA1LA6NCM1 817 aa8.65□□□□□ -1.02
PDCD4-211ENST00000498367 RASGRP1O95267 797 aa8.65□□□□□ -1.02
PDCD4-211ENST00000498367 RAPGEF3O95398 923 aa8.65□□□□□ -1.02
PDCD4-211ENST00000498367 IGHDP01880 384 aa8.65□□□□□ -1.02
PDCD4-211ENST00000498367 CCDC159P0C7I6 412 aa8.65□□□□□ -1.02
PDCD4-211ENST00000498367 NEFHP12036 1026 aa8.65□□□□□ -1.02
PDCD4-211ENST00000498367 SARSP49591 514 aaKnown RBP8.65□□□□□ -1.02
PDCD4-211ENST00000498367 CDKN1CP49918 316 aaPredicted RBP8.65□□□□□ -1.02
PDCD4-211ENST00000498367 PURAQ00577 322 aaKnown RBP8.65□□□□□ -1.02
PDCD4-211ENST00000498367 DDX10Q13206 875 aaKnown RBP8.65□□□□□ -1.02
PDCD4-211ENST00000498367 NNTQ13423 1086 aa8.65□□□□□ -1.02
PDCD4-211ENST00000498367 PICALMQ13492 652 aa8.65□□□□□ -1.02
PDCD4-211ENST00000498367 ECM1Q16610 540 aa8.65□□□□□ -1.02
PDCD4-211ENST00000498367 ZC3H12AQ5D1E8 599 aaKnown RBP8.65□□□□□ -1.02
PDCD4-211ENST00000498367 OTUD6AQ7L8S5 288 aa8.65□□□□□ -1.02
PDCD4-211ENST00000498367 RASSF3Q86WH2 238 aa8.65□□□□□ -1.02
PDCD4-211ENST00000498367 GPRASP2Q96D09 838 aa8.65□□□□□ -1.02
PDCD4-211ENST00000498367 PGBD4Q96DM1 585 aa8.65□□□□□ -1.02
PDCD4-211ENST00000498367 CRELD1Q96HD1 420 aa8.65□□□□□ -1.02
PDCD4-211ENST00000498367 SERINC2Q96SA4 455 aa8.65□□□□□ -1.02
PDCD4-211ENST00000498367 HMX1Q9NP08 348 aaPredicted RBP8.65□□□□□ -1.02
PDCD4-211ENST00000498367 KMT5AQ9NQR1 393 aa8.65□□□□□ -1.02
PDCD4-211ENST00000498367 KIF1CO43896 1103 aaKnown RBP8.64□□□□□ -1.03
PDCD4-211ENST00000498367 KIF5CO60282 957 aa8.64□□□□□ -1.03
PDCD4-211ENST00000498367 SRGNP10124 158 aa8.64□□□□□ -1.03
PDCD4-211ENST00000498367 TIMP2P16035 220 aa8.64□□□□□ -1.03
PDCD4-211ENST00000498367 ZNF132P52740 706 aa8.64□□□□□ -1.03
PDCD4-211ENST00000498367 NAP1L1P55209 391 aaKnown RBP8.64□□□□□ -1.03
PDCD4-211ENST00000498367 TTC31Q49AM3 519 aaPredicted RBP8.64□□□□□ -1.03
PDCD4-211ENST00000498367 CFAP161Q6P656 301 aa8.64□□□□□ -1.03
PDCD4-211ENST00000498367 CPLX2Q6PUV4 134 aaKnown RBP8.64□□□□□ -1.03
PDCD4-211ENST00000498367 C11orf74Q86VG3 221 aa8.64□□□□□ -1.03
PDCD4-211ENST00000498367 ARHGEF25Q86VW2 580 aa8.64□□□□□ -1.03
PDCD4-211ENST00000498367 SKAP1Q86WV1 359 aa8.64□□□□□ -1.03
PDCD4-211ENST00000498367 TMC1Q8TDI8 760 aa8.64□□□□□ -1.03
PDCD4-211ENST00000498367 SLC16A10Q8TF71 515 aa8.64□□□□□ -1.03
PDCD4-211ENST00000498367 ZFP42Q96MM3 310 aa8.64□□□□□ -1.03
PDCD4-211ENST00000498367 ZBTB3Q9H5J0 574 aa8.64□□□□□ -1.03
PDCD4-211ENST00000498367 NEUROD4Q9HD90 331 aa8.64□□□□□ -1.03
PDCD4-211ENST00000498367 TMEM63CQ9P1W3 806 aa8.64□□□□□ -1.03
PDCD4-211ENST00000498367 R3HCC1Q9Y3T6 440 aaKnown RBP8.64□□□□□ -1.03
PDCD4-211ENST00000498367 PCDHGB7Q9Y5F8 929 aa8.64□□□□□ -1.03
PDCD4-211ENST00000498367 GJA3Q9Y6H8 435 aa8.64□□□□□ -1.03
PDCD4-211ENST00000498367 ESYT3A0FGR9 886 aa8.63□□□□□ -1.03
PDCD4-211ENST00000498367 SHTN1A0MZ66 631 aa8.63□□□□□ -1.03
PDCD4-211ENST00000498367 H3BM21 787 aa8.63□□□□□ -1.03
PDCD4-211ENST00000498367 SLC5A1P13866 664 aa8.63□□□□□ -1.03
PDCD4-211ENST00000498367 HTR3AP46098 478 aa8.63□□□□□ -1.03
PDCD4-211ENST00000498367 CD151P48509 253 aa8.63□□□□□ -1.03
PDCD4-211ENST00000498367 SFSWAPQ12872 951 aaKnown RBP8.63□□□□□ -1.03
PDCD4-211ENST00000498367 DPYDQ12882 1025 aa8.63□□□□□ -1.03
PDCD4-211ENST00000498367 SMC1AQ14683 1233 aaKnown RBP8.63□□□□□ -1.03
PDCD4-211ENST00000498367 GFOD2Q3B7J2 385 aa8.63□□□□□ -1.03
PDCD4-211ENST00000498367 NFXL1Q6ZNB6 911 aa8.63□□□□□ -1.03
PDCD4-211ENST00000498367 ITFG2Q969R8 447 aa8.63□□□□□ -1.03
PDCD4-211ENST00000498367 SEC16BQ96JE7 1060 aa8.63□□□□□ -1.03
PDCD4-211ENST00000498367 DMRTB1Q96MA1 342 aa8.63□□□□□ -1.03
PDCD4-211ENST00000498367 CDK15Q96Q40 435 aa8.63□□□□□ -1.03
PDCD4-211ENST00000498367 CD248Q9HCU0 757 aa8.63□□□□□ -1.03
PDCD4-211ENST00000498367 TMEM260Q9NX78 707 aa8.63□□□□□ -1.03
PDCD4-211ENST00000498367 DAAM1Q9Y4D1 1078 aa8.63□□□□□ -1.03
PDCD4-211ENST00000498367 E2F8A0AVK6 867 aa8.62□□□□□ -1.03
PDCD4-211ENST00000498367 FAM13AO94988 1023 aa8.62□□□□□ -1.03
PDCD4-211ENST00000498367 OAS2P29728 719 aaKnown RBP8.62□□□□□ -1.03
PDCD4-211ENST00000498367 GMPRP36959 345 aa8.62□□□□□ -1.03
PDCD4-211ENST00000498367 GPSM2P81274 684 aa8.62□□□□□ -1.03
PDCD4-211ENST00000498367 BIRC3Q13489 604 aa8.62□□□□□ -1.03
PDCD4-211ENST00000498367 RAB33AQ14088 237 aa8.62□□□□□ -1.03
PDCD4-211ENST00000498367 RASA3Q14644 834 aa8.62□□□□□ -1.03
PDCD4-211ENST00000498367 JAMLQ86YT9 394 aa8.62□□□□□ -1.03
PDCD4-211ENST00000498367 SYNPOQ8N3V7 929 aa8.62□□□□□ -1.03
PDCD4-211ENST00000498367 CHAC2Q8WUX2 184 aa8.62□□□□□ -1.03
PDCD4-211ENST00000498367 ZNF830Q96NB3 372 aaPredicted RBP8.62□□□□□ -1.03
PDCD4-211ENST00000498367 MAP3K14Q99558 947 aa8.62□□□□□ -1.03
PDCD4-211ENST00000498367 MAP10Q9P2G4 905 aa8.62□□□□□ -1.03
PDCD4-211ENST00000498367 PLAAQ9Y263 795 aa8.62□□□□□ -1.03
PDCD4-211ENST00000498367 RBM19Q9Y4C8 960 aaKnown RBP8.62□□□□□ -1.03
PDCD4-211ENST00000498367 RASSF10A6NK89 507 aa8.61□□□□□ -1.03
PDCD4-211ENST00000498367 ADH1CP00326 375 aa8.61□□□□□ -1.03
PDCD4-211ENST00000498367 SATB1Q01826 763 aa8.61□□□□□ -1.03
PDCD4-211ENST00000498367 PTPN12Q05209 780 aaKnown RBP8.61□□□□□ -1.03
PDCD4-211ENST00000498367 MCL1Q07820 350 aa8.61□□□□□ -1.03
PDCD4-211ENST00000498367 IFRD2Q12894 506 aaPredicted RBP8.61□□□□□ -1.03
PDCD4-211ENST00000498367 IFT88Q13099 833 aa8.61□□□□□ -1.03
PDCD4-211ENST00000498367 LRRC41Q15345 812 aa8.61□□□□□ -1.03
PDCD4-211ENST00000498367 CT47A1Q5JQC4 288 aaPredicted RBP8.61□□□□□ -1.03
PDCD4-211ENST00000498367 JAKMIP3Q5VZ66 844 aa8.61□□□□□ -1.03
PDCD4-211ENST00000498367 ALG1LQ6GMV1 187 aa8.61□□□□□ -1.03
PDCD4-211ENST00000498367 MRPL14Q6P1L8 145 aaKnown RBP8.61□□□□□ -1.03
PDCD4-211ENST00000498367 ANKS3Q6ZW76 656 aa8.61□□□□□ -1.03
PDCD4-211ENST00000498367 MIGA1Q8NAN2 632 aa8.61□□□□□ -1.03
PDCD4-211ENST00000498367 FAM174AQ8TBP5 190 aa8.61□□□□□ -1.03
PDCD4-211ENST00000498367 PI4K2BQ8TCG2 481 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms