RNA–Protein interactions for RNA: ENST00000497183.5

PRKCZ-223, Transcript of protein kinase C zeta, human

TSL 3

Gene PRKCZ, Length 763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCZ-223	ENST00000497183	PRUNE2	Q8WUY3	3088 aa		9.4	□□□□□ -0.9
PRKCZ-223	ENST00000497183	PLXNB2	O15031	1838 aa		9.4	□□□□□ -0.9
PRKCZ-223	ENST00000497183	CDH23	Q9H251	3354 aa		9.4	□□□□□ -0.9
PRKCZ-223	ENST00000497183	COL9A1	P20849	921 aa		9.4	□□□□□ -0.9
PRKCZ-223	ENST00000497183	IREB2	P48200	963 aa	Known RBP	9.4	□□□□□ -0.9
PRKCZ-223	ENST00000497183	NEXN	Q0ZGT2	675 aa		9.4	□□□□□ -0.9
PRKCZ-223	ENST00000497183	FLII	Q13045	1269 aa		9.4	□□□□□ -0.9
PRKCZ-223	ENST00000497183	SUPT20HL1	Q3ZLR7	823 aa		9.4	□□□□□ -0.9
PRKCZ-223	ENST00000497183	LINS1	Q8NG48	757 aa		9.4	□□□□□ -0.9
PRKCZ-223	ENST00000497183	TDRD7	Q8NHU6	1098 aa	Known RBP	9.4	□□□□□ -0.9
PRKCZ-223	ENST00000497183	MPHOSPH8	Q99549	860 aa		9.4	□□□□□ -0.9
PRKCZ-223	ENST00000497183	TMEM39B	Q9GZU3	492 aa		9.4	□□□□□ -0.9
PRKCZ-223	ENST00000497183	VEZT	Q9HBM0	779 aa		9.4	□□□□□ -0.9
PRKCZ-223	ENST00000497183	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	9.4	□□□□□ -0.9
PRKCZ-223	ENST00000497183	ZNF70	Q9UC06	446 aa	Predicted RBP	9.4	□□□□□ -0.9
PRKCZ-223	ENST00000497183	SNCAIP	Q9Y6H5	919 aa		9.4	□□□□□ -0.9
PRKCZ-223	ENST00000497183	DOCK1	Q14185	1865 aa		9.4	□□□□□ -0.91
PRKCZ-223	ENST00000497183	SPDYE5	A6NIY4	337 aa		9.39	□□□□□ -0.91
PRKCZ-223	ENST00000497183	SLC4A2	P04920	1241 aa		9.39	□□□□□ -0.91
PRKCZ-223	ENST00000497183	CALD1	Q05682	793 aa	Known RBP	9.39	□□□□□ -0.91
PRKCZ-223	ENST00000497183	TWISTNB	Q3B726	338 aa	Predicted RBP	9.39	□□□□□ -0.91
PRKCZ-223	ENST00000497183	MIER1	Q8N108	512 aa		9.39	□□□□□ -0.91
PRKCZ-223	ENST00000497183	SH3TC2	Q8TF17	1288 aa		9.39	□□□□□ -0.91
PRKCZ-223	ENST00000497183	DNAAF4	Q8WXU2	420 aa		9.39	□□□□□ -0.91
PRKCZ-223	ENST00000497183	KAZALD1	Q96I82	304 aa		9.39	□□□□□ -0.91
PRKCZ-223	ENST00000497183	ZNF594	Q96JF6	807 aa	Predicted RBP	9.39	□□□□□ -0.91
PRKCZ-223	ENST00000497183	TDRD3	Q9H7E2	651 aa	Known RBP	9.39	□□□□□ -0.91
PRKCZ-223	ENST00000497183	RAPGEFL1	Q9UHV5	662 aa		9.39	□□□□□ -0.91
PRKCZ-223	ENST00000497183	SERPINA10	Q9UK55	444 aa		9.39	□□□□□ -0.91
PRKCZ-223	ENST00000497183	ATAD5	Q96QE3	1844 aa		9.39	□□□□□ -0.91
PRKCZ-223	ENST00000497183	MYH2	Q9UKX2	1941 aa		9.39	□□□□□ -0.91
PRKCZ-223	ENST00000497183	LOC285556	D6RIA3	1793 aa		9.38	□□□□□ -0.91
PRKCZ-223	ENST00000497183	CCL15-CCL14	A0A0B4J2E2	113 aa		9.38	□□□□□ -0.91
PRKCZ-223	ENST00000497183	ANKRD18B	A2A2Z9	1011 aa		9.38	□□□□□ -0.91
PRKCZ-223	ENST00000497183	ANP32C	O43423	234 aa		9.38	□□□□□ -0.91
PRKCZ-223	ENST00000497183	KCNJ4	P48050	445 aa		9.38	□□□□□ -0.91
PRKCZ-223	ENST00000497183	LACTB	P83111	547 aa	Predicted RBP	9.38	□□□□□ -0.91
PRKCZ-223	ENST00000497183	MOGS	Q13724	837 aa		9.38	□□□□□ -0.91
PRKCZ-223	ENST00000497183	TAF1C	Q15572	869 aa	Predicted RBP	9.38	□□□□□ -0.91
PRKCZ-223	ENST00000497183	CCL15	Q16663	113 aa		9.38	□□□□□ -0.91
PRKCZ-223	ENST00000497183	CCDC27	Q2M243	656 aa		9.38	□□□□□ -0.91
PRKCZ-223	ENST00000497183	SLC9C1	Q4G0N8	1177 aa		9.38	□□□□□ -0.91
PRKCZ-223	ENST00000497183	CCDC184	Q52MB2	194 aa		9.38	□□□□□ -0.91
PRKCZ-223	ENST00000497183	BEND3	Q5T5X7	828 aa		9.38	□□□□□ -0.91
PRKCZ-223	ENST00000497183	ZNF804A	Q7Z570	1209 aa		9.38	□□□□□ -0.91
PRKCZ-223	ENST00000497183	WWC1	Q8IX03	1113 aa		9.38	□□□□□ -0.91
PRKCZ-223	ENST00000497183	DZIP1L	Q8IYY4	767 aa	Known RBP	9.38	□□□□□ -0.91
PRKCZ-223	ENST00000497183	FAM84B	Q96KN1	310 aa	Predicted RBP	9.38	□□□□□ -0.91
PRKCZ-223	ENST00000497183	BTBD19	C9JJ37	291 aa		9.37	□□□□□ -0.91
PRKCZ-223	ENST00000497183		F6X3S4	739 aa		9.37	□□□□□ -0.91
PRKCZ-223	ENST00000497183	SOX1	O00570	391 aa	Predicted RBP	9.37	□□□□□ -0.91
PRKCZ-223	ENST00000497183	MYO1B	O43795	1136 aa		9.37	□□□□□ -0.91
PRKCZ-223	ENST00000497183	TLR2	O60603	784 aa		9.37	□□□□□ -0.91
PRKCZ-223	ENST00000497183	GYG1	P46976	350 aa		9.37	□□□□□ -0.91
PRKCZ-223	ENST00000497183	MTFR1	Q15390	333 aa		9.37	□□□□□ -0.91
PRKCZ-223	ENST00000497183	MFSD14B	Q5SR56	506 aa		9.37	□□□□□ -0.91
PRKCZ-223	ENST00000497183	OTUD7B	Q6GQQ9	843 aa		9.37	□□□□□ -0.91
PRKCZ-223	ENST00000497183	TTF2	Q9UNY4	1162 aa	Known RBP	9.37	□□□□□ -0.91
PRKCZ-223	ENST00000497183	FRMPD3	Q5JV73	1810 aa		9.37	□□□□□ -0.91
PRKCZ-223	ENST00000497183	MUC3A	Q02505	3323 aa		9.37	□□□□□ -0.91
PRKCZ-223	ENST00000497183	RPAP1	Q9BWH6	1393 aa	Predicted RBP	9.37	□□□□□ -0.91
PRKCZ-223	ENST00000497183	CDK5RAP2	Q96SN8	1893 aa		9.36	□□□□□ -0.91
PRKCZ-223	ENST00000497183	FANCI	Q9NVI1	1328 aa		9.36	□□□□□ -0.91
PRKCZ-223	ENST00000497183	TCP10L2	B9ZVM9	353 aa		9.36	□□□□□ -0.91
PRKCZ-223	ENST00000497183	IRF6	O14896	467 aa		9.36	□□□□□ -0.91
PRKCZ-223	ENST00000497183	VAMP4	O75379	141 aa		9.36	□□□□□ -0.91
PRKCZ-223	ENST00000497183	MYC	P01106	439 aa	Predicted RBP	9.36	□□□□□ -0.91
PRKCZ-223	ENST00000497183	CRK	P46108	304 aa		9.36	□□□□□ -0.91
PRKCZ-223	ENST00000497183	GTF2A2	P52657	109 aa		9.36	□□□□□ -0.91
PRKCZ-223	ENST00000497183	CACNB3	P54284	484 aa		9.36	□□□□□ -0.91
PRKCZ-223	ENST00000497183	MAP3K9	P80192	1104 aa		9.36	□□□□□ -0.91
PRKCZ-223	ENST00000497183	IFIT5	Q13325	482 aa	Known RBP	9.36	□□□□□ -0.91
PRKCZ-223	ENST00000497183	LMBR1L	Q6UX01	489 aa		9.36	□□□□□ -0.91
PRKCZ-223	ENST00000497183	C17orf99	Q6UX52	265 aa		9.36	□□□□□ -0.91
PRKCZ-223	ENST00000497183	VGLL2	Q8N8G2	317 aa		9.36	□□□□□ -0.91
PRKCZ-223	ENST00000497183	LRCH3	Q96II8	777 aa		9.36	□□□□□ -0.91
PRKCZ-223	ENST00000497183	TRIM47	Q96LD4	638 aa		9.36	□□□□□ -0.91
PRKCZ-223	ENST00000497183	TMEM106C	Q9BVX2	250 aa		9.36	□□□□□ -0.91
PRKCZ-223	ENST00000497183	STK31	Q9BXU1	1019 aa		9.36	□□□□□ -0.91
PRKCZ-223	ENST00000497183	PUS3	Q9BZE2	481 aa	Known RBP	9.36	□□□□□ -0.91
PRKCZ-223	ENST00000497183	MYH16	Q9H6N6	1097 aa		9.36	□□□□□ -0.91
PRKCZ-223	ENST00000497183	ZFYVE28	Q9HCC9	887 aa		9.36	□□□□□ -0.91
PRKCZ-223	ENST00000497183	ZCCHC17	Q9NP64	241 aa	Known RBP	9.36	□□□□□ -0.91
PRKCZ-223	ENST00000497183	ATRNL1	Q5VV63	1379 aa		9.36	□□□□□ -0.91
PRKCZ-223	ENST00000497183	SIPA1L1	O43166	1804 aa		9.35	□□□□□ -0.91
PRKCZ-223	ENST00000497183	IL16	Q14005	1332 aa		9.35	□□□□□ -0.91
PRKCZ-223	ENST00000497183	FKBP5	Q13451	457 aa	Predicted RBP	9.35	□□□□□ -0.91
PRKCZ-223	ENST00000497183	TNFAIP1	Q13829	316 aa		9.35	□□□□□ -0.91
PRKCZ-223	ENST00000497183	DDX60L	Q5H9U9	1706 aa	Known RBP	9.35	□□□□□ -0.91
PRKCZ-223	ENST00000497183	FBXO33	Q7Z6M2	555 aa		9.35	□□□□□ -0.91
PRKCZ-223	ENST00000497183	ZKSCAN4	Q969J2	545 aa	Predicted RBP	9.35	□□□□□ -0.91
PRKCZ-223	ENST00000497183	CHMP4A	Q9BY43	222 aa		9.35	□□□□□ -0.91
PRKCZ-223	ENST00000497183	RIPOR2	Q9Y4F9	1068 aa		9.35	□□□□□ -0.91
PRKCZ-223	ENST00000497183	GRM8	O00222	908 aa		9.34	□□□□□ -0.91
PRKCZ-223	ENST00000497183	PLA2G5	P39877	138 aa		9.34	□□□□□ -0.91
PRKCZ-223	ENST00000497183	RBM5	P52756	815 aa	Known RBP eCLIP	9.34	□□□□□ -0.91
PRKCZ-223	ENST00000497183	PPIL2	Q13356	520 aa		9.34	□□□□□ -0.91
PRKCZ-223	ENST00000497183	UBE4A	Q14139	1066 aa		9.34	□□□□□ -0.91
PRKCZ-223	ENST00000497183	APOBEC3H	Q6NTF7	200 aa	Known RBP	9.34	□□□□□ -0.91
PRKCZ-223	ENST00000497183	LDHAL6A	Q6ZMR3	332 aa		9.34	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms