RNA–Protein interactions for RNA: ENST00000497044.5

SHTN1-206, Transcript of shootin 1, humanhuman

TSL 2

Gene SHTN1, Length 3,647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-206ENST00000497044 ZDHHC1Q8WTX9 485 aa4.22□□□□□ -1.73
SHTN1-206ENST00000497044 ABHD8Q96I13 439 aa4.22□□□□□ -1.73
SHTN1-206ENST00000497044 TLL2Q9Y6L7 1015 aa4.22□□□□□ -1.73
SHTN1-206ENST00000497044 EML1O00423 815 aa4.22□□□□□ -1.73
SHTN1-206ENST00000497044 VARSP26640 1264 aaKnown RBP4.22□□□□□ -1.73
SHTN1-206ENST00000497044 PDE6BP35913 854 aa4.22□□□□□ -1.73
SHTN1-206ENST00000497044 XKR5Q6UX68 686 aa4.22□□□□□ -1.73
SHTN1-206ENST00000497044 TMC4Q7Z404 712 aa4.22□□□□□ -1.73
SHTN1-206ENST00000497044 LINC00116Q8NCU8 138 aa4.22□□□□□ -1.73
SHTN1-206ENST00000497044 GMLQ99445 158 aa4.22□□□□□ -1.73
SHTN1-206ENST00000497044 NARFQ9UHQ1 456 aa4.22□□□□□ -1.73
SHTN1-206ENST00000497044 PHKG2P15735 406 aa4.22□□□□□ -1.73
SHTN1-206ENST00000497044 ATP2B4P23634 1241 aa4.22□□□□□ -1.73
SHTN1-206ENST00000497044 GRNP28799 593 aaKnown RBP4.22□□□□□ -1.73
SHTN1-206ENST00000497044 FKBP1BP68106 108 aa4.22□□□□□ -1.73
SHTN1-206ENST00000497044 CLEC4GQ6UXB4 293 aa4.22□□□□□ -1.73
SHTN1-206ENST00000497044 HELQQ8TDG4 1101 aa4.22□□□□□ -1.73
SHTN1-206ENST00000497044 COG3Q96JB2 828 aa4.22□□□□□ -1.73
SHTN1-206ENST00000497044 BRIP1Q9BX63 1249 aa4.22□□□□□ -1.73
SHTN1-206ENST00000497044 RTCBQ9Y3I0 505 aaKnown RBP4.22□□□□□ -1.73
SHTN1-206ENST00000497044 CARMIL3Q8ND23 1372 aa4.21□□□□□ -1.73
SHTN1-206ENST00000497044 ADD1P35611 737 aaKnown RBP4.21□□□□□ -1.73
SHTN1-206ENST00000497044 PTPN12Q05209 780 aaKnown RBP4.21□□□□□ -1.73
SHTN1-206ENST00000497044 FAM182BQ5T319 152 aa4.21□□□□□ -1.73
SHTN1-206ENST00000497044 RAPGEF4Q8WZA2 1011 aa4.21□□□□□ -1.73
SHTN1-206ENST00000497044 CNKSR1Q969H4 720 aa4.21□□□□□ -1.73
SHTN1-206ENST00000497044 CDK2AP1O14519 115 aa4.21□□□□□ -1.74
SHTN1-206ENST00000497044 INHAP05111 366 aa4.21□□□□□ -1.74
SHTN1-206ENST00000497044 B4GALNT3Q6L9W6 998 aa4.21□□□□□ -1.74
SHTN1-206ENST00000497044 TRIM50Q86XT4 487 aa4.21□□□□□ -1.74
SHTN1-206ENST00000497044 CITED4Q96RK1 184 aa4.21□□□□□ -1.74
SHTN1-206ENST00000497044 FZD9O00144 591 aa4.21□□□□□ -1.74
SHTN1-206ENST00000497044 RTKN2Q8IZC4 609 aa4.21□□□□□ -1.74
SHTN1-206ENST00000497044 CARD11Q9BXL7 1154 aa4.21□□□□□ -1.74
SHTN1-206ENST00000497044 ERBB4Q15303 1308 aa4.2□□□□□ -1.74
SHTN1-206ENST00000497044 IL2RAP01589 272 aa4.2□□□□□ -1.74
SHTN1-206ENST00000497044 CCDC27Q2M243 656 aa4.2□□□□□ -1.74
SHTN1-206ENST00000497044 AEBP1Q8IUX7 1158 aa4.2□□□□□ -1.74
SHTN1-206ENST00000497044 ARHGAP9Q9BRR9 750 aa4.2□□□□□ -1.74
SHTN1-206ENST00000497044 RTFDC1Q9BY42 306 aaPredicted RBP4.2□□□□□ -1.74
SHTN1-206ENST00000497044 LRFN2Q9ULH4 789 aa4.2□□□□□ -1.74
SHTN1-206ENST00000497044 BCS1LQ9Y276 419 aa4.2□□□□□ -1.74
SHTN1-206ENST00000497044 SLX4Q8IY92 1834 aa4.2□□□□□ -1.74
SHTN1-206ENST00000497044 COL3A1P02461 1466 aaPredicted RBP4.2□□□□□ -1.74
SHTN1-206ENST00000497044 SFI1A8K8P3 1242 aa4.2□□□□□ -1.74
SHTN1-206ENST00000497044 DPEP1P16444 411 aa4.2□□□□□ -1.74
SHTN1-206ENST00000497044 SERPINB4P48594 390 aa4.2□□□□□ -1.74
SHTN1-206ENST00000497044 MAP3K10Q02779 954 aa4.2□□□□□ -1.74
SHTN1-206ENST00000497044 INTS6LQ5JSJ4 861 aaKnown RBP4.2□□□□□ -1.74
SHTN1-206ENST00000497044 TESK2Q96S53 571 aa4.2□□□□□ -1.74
SHTN1-206ENST00000497044 ATG3Q9NT62 314 aa4.2□□□□□ -1.74
SHTN1-206ENST00000497044 NLRP2Q9NX02 1062 aa4.2□□□□□ -1.74
SHTN1-206ENST00000497044 CACNA1SQ13698 1873 aa4.2□□□□□ -1.74
SHTN1-206ENST00000497044 NUP98P52948 1817 aa4.2□□□□□ -1.74
SHTN1-206ENST00000497044 ERVH48-1M5A8F1 160 aa4.2□□□□□ -1.74
SHTN1-206ENST00000497044 CYP27B1O15528 508 aa4.2□□□□□ -1.74
SHTN1-206ENST00000497044 PTCD1O75127 700 aaKnown RBP4.2□□□□□ -1.74
SHTN1-206ENST00000497044 TEAD4Q15561 434 aa4.2□□□□□ -1.74
SHTN1-206ENST00000497044 LIAT1Q6ZQX7 453 aa4.2□□□□□ -1.74
SHTN1-206ENST00000497044 SLC43A3Q8NBI5 491 aa4.2□□□□□ -1.74
SHTN1-206ENST00000497044 CCER1Q8TC90 406 aaPredicted RBP4.2□□□□□ -1.74
SHTN1-206ENST00000497044 PIGBQ92521 554 aa4.2□□□□□ -1.74
SHTN1-206ENST00000497044 SLC6A16Q9GZN6 736 aa4.2□□□□□ -1.74
SHTN1-206ENST00000497044 ETNK1Q9HBU6 452 aa4.2□□□□□ -1.74
SHTN1-206ENST00000497044 PITPNM2Q9BZ72 1349 aa4.19□□□□□ -1.74
SHTN1-206ENST00000497044 COL2A1P02458 1487 aaPredicted RBP4.19□□□□□ -1.74
SHTN1-206ENST00000497044 RFX1P22670 979 aa4.19□□□□□ -1.74
SHTN1-206ENST00000497044 FKBP4Q02790 459 aaKnown RBP eCLIP4.19□□□□□ -1.74
SHTN1-206ENST00000497044 INTS3Q68E01 1043 aaKnown RBP4.19□□□□□ -1.74
SHTN1-206ENST00000497044 GPC2Q8N158 579 aa4.19□□□□□ -1.74
SHTN1-206ENST00000497044 TTLL6Q8N841 843 aa4.19□□□□□ -1.74
SHTN1-206ENST00000497044 SCHIP1Q9P0W5 487 aaPredicted RBP4.19□□□□□ -1.74
SHTN1-206ENST00000497044 RNF223E7ERA6 249 aa4.19□□□□□ -1.74
SHTN1-206ENST00000497044 FOXN1O15353 648 aa4.19□□□□□ -1.74
SHTN1-206ENST00000497044 HTATSF1O43719 755 aaKnown RBP4.19□□□□□ -1.74
SHTN1-206ENST00000497044 HOXA10P31260 410 aaPredicted RBP4.19□□□□□ -1.74
SHTN1-206ENST00000497044 SEC13P55735 322 aa4.19□□□□□ -1.74
SHTN1-206ENST00000497044 GTF2IP78347 998 aa4.19□□□□□ -1.74
SHTN1-206ENST00000497044 TAGLNQ01995 201 aaKnown RBP4.19□□□□□ -1.74
SHTN1-206ENST00000497044 NBPF1Q3BBV0 1214 aa4.19□□□□□ -1.74
SHTN1-206ENST00000497044 DEPDC4Q8N2C3 294 aa4.19□□□□□ -1.74
SHTN1-206ENST00000497044 SIN3AQ96ST3 1273 aa4.19□□□□□ -1.74
SHTN1-206ENST00000497044 TMOD3Q9NYL9 352 aa4.19□□□□□ -1.74
SHTN1-206ENST00000497044 WDR33Q9C0J8 1336 aaKnown RBP4.19□□□□□ -1.74
SHTN1-206ENST00000497044 A0A1W2PRU2 124 aa4.19□□□□□ -1.74
SHTN1-206ENST00000497044 MMP10P09238 476 aa4.19□□□□□ -1.74
SHTN1-206ENST00000497044 ATP1A2P50993 1020 aa4.19□□□□□ -1.74
SHTN1-206ENST00000497044 BABAM1Q9NWV8 329 aa4.19□□□□□ -1.74
SHTN1-206ENST00000497044 DOLKQ9UPQ8 538 aa4.19□□□□□ -1.74
SHTN1-206ENST00000497044 USP3Q9Y6I4 520 aa4.19□□□□□ -1.74
SHTN1-206ENST00000497044 COL15A1P39059 1388 aa4.18□□□□□ -1.74
SHTN1-206ENST00000497044 S1PR4O95977 384 aa4.18□□□□□ -1.74
SHTN1-206ENST00000497044 ITPK1Q13572 414 aa4.18□□□□□ -1.74
SHTN1-206ENST00000497044 PLEKHO1Q53GL0 409 aaPredicted RBP4.18□□□□□ -1.74
SHTN1-206ENST00000497044 COX20Q5RI15 118 aa4.18□□□□□ -1.74
SHTN1-206ENST00000497044 RNF20Q5VTR2 975 aa4.18□□□□□ -1.74
SHTN1-206ENST00000497044 CCDC102BQ68D86 513 aa4.18□□□□□ -1.74
SHTN1-206ENST00000497044 BPHLQ86WA6 291 aaPredicted RBP4.18□□□□□ -1.74
SHTN1-206ENST00000497044 GRIP2Q9C0E4 1043 aa4.18□□□□□ -1.74
SHTN1-206ENST00000497044 NMRK2Q9NPI5 230 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms