RNA–Protein interactions for RNA: ENST00000496756.2

PHGDH-207, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-207ENST00000496756 IGKV5-2P06315 115 aa16.4■□□□□ 0.22
PHGDH-207ENST00000496756 SLC4A8Q2Y0W8 1093 aa16.4■□□□□ 0.22
PHGDH-207ENST00000496756 PI4KAP2A4QPH2 592 aa16.39■□□□□ 0.21
PHGDH-207ENST00000496756 SPDYE2BA6NHP3 402 aa16.39■□□□□ 0.21
PHGDH-207ENST00000496756 USP2O75604 605 aaPredicted RBP16.39■□□□□ 0.21
PHGDH-207ENST00000496756 SPDYE6P0CI01 402 aa16.39■□□□□ 0.21
PHGDH-207ENST00000496756 KLRK1P26718 216 aa16.39■□□□□ 0.21
PHGDH-207ENST00000496756 NBPF12Q5TAG4 269 aaPredicted RBP16.39■□□□□ 0.21
PHGDH-207ENST00000496756 PI4KAP1Q8N8J0 262 aa16.39■□□□□ 0.21
PHGDH-207ENST00000496756 PTPN18Q99952 460 aa16.39■□□□□ 0.21
PHGDH-207ENST00000496756 TRIOBPQ9H2D6 2365 aa16.38■□□□□ 0.21
PHGDH-207ENST00000496756 CLRN2A0PK11 232 aa16.38■□□□□ 0.21
PHGDH-207ENST00000496756 ITGA6P23229 1130 aa16.38■□□□□ 0.21
PHGDH-207ENST00000496756 GJA5P36382 358 aa16.38■□□□□ 0.21
PHGDH-207ENST00000496756 FKBP1AP62942 108 aaKnown RBP16.38■□□□□ 0.21
PHGDH-207ENST00000496756 FKBP5Q13451 457 aaPredicted RBP16.38■□□□□ 0.21
PHGDH-207ENST00000496756 TNFAIP1Q13829 316 aa16.38■□□□□ 0.21
PHGDH-207ENST00000496756 CFAP100Q494V2 611 aa16.38■□□□□ 0.21
PHGDH-207ENST00000496756 UBE3BQ7Z3V4 1068 aa16.38■□□□□ 0.21
PHGDH-207ENST00000496756 CERS5Q8N5B7 392 aa16.38■□□□□ 0.21
PHGDH-207ENST00000496756 VEZTQ9HBM0 779 aa16.38■□□□□ 0.21
PHGDH-207ENST00000496756 ZFYVE28Q9HCC9 887 aa16.38■□□□□ 0.21
PHGDH-207ENST00000496756 PCDHB15Q9Y5E8 787 aa16.38■□□□□ 0.21
PHGDH-207ENST00000496756 NEURL1BA8MQ27 555 aa16.37■□□□□ 0.21
PHGDH-207ENST00000496756 H7C1W4 665 aa16.37■□□□□ 0.21
PHGDH-207ENST00000496756 WDHD1O75717 1129 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-207ENST00000496756 RASA3Q14644 834 aa16.37■□□□□ 0.21
PHGDH-207ENST00000496756 C15orf52Q6ZUT6 534 aaKnown RBP16.37■□□□□ 0.21
PHGDH-207ENST00000496756 OPTNQ96CV9 577 aa16.37■□□□□ 0.21
PHGDH-207ENST00000496756 PRMT6Q96LA8 375 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-207ENST00000496756 PLA2G12BQ9BX93 195 aa16.37■□□□□ 0.21
PHGDH-207ENST00000496756 TSHZ2Q9NRE2 1034 aa16.37■□□□□ 0.21
PHGDH-207ENST00000496756 HDAC5Q9UQL6 1122 aa16.37■□□□□ 0.21
PHGDH-207ENST00000496756 F8W031 263 aaPredicted RBP16.36■□□□□ 0.21
PHGDH-207ENST00000496756 IGHDP01880 384 aa16.36■□□□□ 0.21
PHGDH-207ENST00000496756 GNAI3P08754 354 aa16.36■□□□□ 0.21
PHGDH-207ENST00000496756 RBM5P52756 815 aaKnown RBP eCLIP16.36■□□□□ 0.21
PHGDH-207ENST00000496756 CHRNDQ07001 517 aa16.36■□□□□ 0.21
PHGDH-207ENST00000496756 TAF1CQ15572 869 aaPredicted RBP16.36■□□□□ 0.21
PHGDH-207ENST00000496756 CWF19L2Q2TBE0 894 aaKnown RBP16.36■□□□□ 0.21
PHGDH-207ENST00000496756 ZNF804AQ7Z570 1209 aa16.36■□□□□ 0.21
PHGDH-207ENST00000496756 RPAP2Q8IXW5 612 aaPredicted RBP16.36■□□□□ 0.21
PHGDH-207ENST00000496756 MS4A4AQ96JQ5 239 aa16.36■□□□□ 0.21
PHGDH-207ENST00000496756 PTCH2Q9Y6C5 1203 aa16.36■□□□□ 0.21
PHGDH-207ENST00000496756 H0YGN5 161 aa16.35■□□□□ 0.21
PHGDH-207ENST00000496756 IL1R1P14778 569 aa16.35■□□□□ 0.21
PHGDH-207ENST00000496756 GTF2A2P52657 109 aa16.35■□□□□ 0.21
PHGDH-207ENST00000496756 CAP1Q01518 475 aa16.35■□□□□ 0.21
PHGDH-207ENST00000496756 ELP3Q9H9T3 547 aa16.35■□□□□ 0.21
PHGDH-207ENST00000496756 PCDHAC2Q9Y5I4 1007 aa16.35■□□□□ 0.21
PHGDH-207ENST00000496756 GNRH1P01148 92 aa16.34■□□□□ 0.21
PHGDH-207ENST00000496756 CSF1RP07333 972 aa16.34■□□□□ 0.21
PHGDH-207ENST00000496756 KIF22Q14807 665 aa16.34■□□□□ 0.21
PHGDH-207ENST00000496756 OTUD5Q96G74 571 aa16.34■□□□□ 0.21
PHGDH-207ENST00000496756 SZT2Q5T011 3432 aa16.33■□□□□ 0.21
PHGDH-207ENST00000496756 CCL15-CCL14A0A0B4J2E2 113 aa16.33■□□□□ 0.2
PHGDH-207ENST00000496756 ANKRD18BA2A2Z9 1011 aa16.33■□□□□ 0.2
PHGDH-207ENST00000496756 CCL15Q16663 113 aa16.33■□□□□ 0.2
PHGDH-207ENST00000496756 G2E3Q7L622 706 aa16.33■□□□□ 0.2
PHGDH-207ENST00000496756 SMC5Q8IY18 1101 aa16.33■□□□□ 0.2
PHGDH-207ENST00000496756 BRI3BPQ8WY22 251 aa16.33■□□□□ 0.2
PHGDH-207ENST00000496756 HMMRO75330 724 aa16.32■□□□□ 0.2
PHGDH-207ENST00000496756 PRMT2P55345 433 aa16.32■□□□□ 0.2
PHGDH-207ENST00000496756 GCKRQ14397 625 aa16.32■□□□□ 0.2
PHGDH-207ENST00000496756 ZCCHC17Q9NP64 241 aaKnown RBP16.32■□□□□ 0.2
PHGDH-207ENST00000496756 IRS2Q9Y4H2 1338 aa16.32■□□□□ 0.2
PHGDH-207ENST00000496756 CSADQ9Y600 493 aa16.32■□□□□ 0.2
PHGDH-207ENST00000496756 CACNA1FO60840 1977 aa16.31■□□□□ 0.2
PHGDH-207ENST00000496756 OTOFQ9HC10 1997 aa16.31■□□□□ 0.2
PHGDH-207ENST00000496756 TAF5LO75529 589 aa16.31■□□□□ 0.2
PHGDH-207ENST00000496756 MYCP01106 439 aaPredicted RBP16.31■□□□□ 0.2
PHGDH-207ENST00000496756 MAP3K9P80192 1104 aa16.31■□□□□ 0.2
PHGDH-207ENST00000496756 SPDYE2Q495Y8 402 aa16.31■□□□□ 0.2
PHGDH-207ENST00000496756 SLC4A10Q6U841 1118 aa16.31■□□□□ 0.2
PHGDH-207ENST00000496756 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.31■□□□□ 0.2
PHGDH-207ENST00000496756 SERPINA10Q9UK55 444 aa16.31■□□□□ 0.2
PHGDH-207ENST00000496756 RANBP2P49792 3224 aaKnown RBP16.3■□□□□ 0.2
PHGDH-207ENST00000496756 TLR2O60603 784 aa16.3■□□□□ 0.2
PHGDH-207ENST00000496756 TNNI2P48788 182 aa16.3■□□□□ 0.2
PHGDH-207ENST00000496756 CASP7P55210 303 aa16.3■□□□□ 0.2
PHGDH-207ENST00000496756 LACTBP83111 547 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-207ENST00000496756 IFIT5Q13325 482 aaKnown RBP16.3■□□□□ 0.2
PHGDH-207ENST00000496756 VGLL4Q14135 290 aa16.3■□□□□ 0.2
PHGDH-207ENST00000496756 CHRDL2Q6WN34 429 aa16.3■□□□□ 0.2
PHGDH-207ENST00000496756 FAM43AQ8N2R8 423 aa16.3■□□□□ 0.2
PHGDH-207ENST00000496756 HELBQ8NG08 1087 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-207ENST00000496756 SH3TC2Q8TF17 1288 aa16.3■□□□□ 0.2
PHGDH-207ENST00000496756 DNAAF4Q8WXU2 420 aa16.3■□□□□ 0.2
PHGDH-207ENST00000496756 SRCIN1Q9C0H9 1055 aa16.3■□□□□ 0.2
PHGDH-207ENST00000496756 ZNF70Q9UC06 446 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-207ENST00000496756 AOX1Q06278 1338 aa16.29■□□□□ 0.2
PHGDH-207ENST00000496756 SNAP23O00161 211 aa16.29■□□□□ 0.2
PHGDH-207ENST00000496756 ALDH1L1O75891 902 aa16.29■□□□□ 0.2
PHGDH-207ENST00000496756 GNAI2P04899 355 aa16.29■□□□□ 0.2
PHGDH-207ENST00000496756 CETPP11597 493 aa16.29■□□□□ 0.2
PHGDH-207ENST00000496756 ANKRD44Q8N8A2 993 aa16.29■□□□□ 0.2
PHGDH-207ENST00000496756 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.29■□□□□ 0.2
PHGDH-207ENST00000496756 NKX2-3Q8TAU0 364 aa16.29■□□□□ 0.2
PHGDH-207ENST00000496756 DPF3Q92784 378 aa16.29■□□□□ 0.2
PHGDH-207ENST00000496756 TEPSINQ96N21 525 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms