RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 DCAF8Q5TAQ9 597 aa20.19■□□□□ 0.82
LMNA-216ENST00000496738 TTLL5Q6EMB2 1281 aa20.19■□□□□ 0.82
LMNA-216ENST00000496738 NAA16Q6N069 864 aaPredicted RBP20.19■□□□□ 0.82
LMNA-216ENST00000496738 HSCBQ8IWL3 235 aa20.19■□□□□ 0.82
LMNA-216ENST00000496738 LCORLQ8N3X6 602 aa20.19■□□□□ 0.82
LMNA-216ENST00000496738 EYA3Q99504 573 aa20.19■□□□□ 0.82
LMNA-216ENST00000496738 CPA1P15085 419 aa20.18■□□□□ 0.82
LMNA-216ENST00000496738 NBR1Q14596 966 aa20.18■□□□□ 0.82
LMNA-216ENST00000496738 WDR66Q8TBY9 1149 aa20.18■□□□□ 0.82
LMNA-216ENST00000496738 DBNDD1Q9H9R9 158 aa20.18■□□□□ 0.82
LMNA-216ENST00000496738 ZKSCAN1P17029 563 aaPredicted RBP20.18■□□□□ 0.82
LMNA-216ENST00000496738 SPRYD3Q8NCJ5 442 aa20.18■□□□□ 0.82
LMNA-216ENST00000496738 NSUN4Q96CB9 384 aaKnown RBP20.18■□□□□ 0.82
LMNA-216ENST00000496738 COA1Q9GZY4 146 aa20.18■□□□□ 0.82
LMNA-216ENST00000496738 ZMYND15Q9H091 742 aa20.18■□□□□ 0.82
LMNA-216ENST00000496738 APPP05067 770 aa20.17■□□□□ 0.82
LMNA-216ENST00000496738 GTF2IP78347 998 aa20.17■□□□□ 0.82
LMNA-216ENST00000496738 DZIP1Q86YF9 867 aaKnown RBP20.17■□□□□ 0.82
LMNA-216ENST00000496738 JAKMIP1Q96N16 626 aaKnown RBP20.17■□□□□ 0.82
LMNA-216ENST00000496738 STRBPQ96SI9 672 aaKnown RBP20.17■□□□□ 0.82
LMNA-216ENST00000496738 TGFB2P61812 414 aa20.17■□□□□ 0.82
LMNA-216ENST00000496738 AOC3Q16853 763 aa20.17■□□□□ 0.82
LMNA-216ENST00000496738 RNF20Q5VTR2 975 aa20.17■□□□□ 0.82
LMNA-216ENST00000496738 SNED1Q8TER0 1413 aa20.17■□□□□ 0.82
LMNA-216ENST00000496738 PRKAB2O43741 272 aa20.16■□□□□ 0.82
LMNA-216ENST00000496738 LDHBP07195 334 aaKnown RBP20.16■□□□□ 0.82
LMNA-216ENST00000496738 CYP21A2P08686 494 aa20.16■□□□□ 0.82
LMNA-216ENST00000496738 CASTP20810 708 aaKnown RBP20.16■□□□□ 0.82
LMNA-216ENST00000496738 NOL8Q76FK4 1167 aaKnown RBP20.16■□□□□ 0.82
LMNA-216ENST00000496738 KCNB2Q92953 911 aa20.16■□□□□ 0.82
LMNA-216ENST00000496738 PIM2Q9P1W9 311 aa20.16■□□□□ 0.82
LMNA-216ENST00000496738 CHD4Q14839 1912 aa20.16■□□□□ 0.82
LMNA-216ENST00000496738 DYNLL1P63167 89 aaKnown RBP20.16■□□□□ 0.82
LMNA-216ENST00000496738 COL9A3Q14050 684 aaPredicted RBP20.16■□□□□ 0.82
LMNA-216ENST00000496738 SALL1Q9NSC2 1324 aa20.16■□□□□ 0.82
LMNA-216ENST00000496738 MAST2Q6P0Q8 1798 aa20.16■□□□□ 0.82
LMNA-216ENST00000496738 CCDC93Q567U6 631 aa20.15■□□□□ 0.82
LMNA-216ENST00000496738 MFSD14BQ5SR56 506 aa20.15■□□□□ 0.82
LMNA-216ENST00000496738 SPTY2D1Q68D10 685 aaPredicted RBP20.15■□□□□ 0.82
LMNA-216ENST00000496738 ZGPATQ8N5A5 531 aaKnown RBP20.15■□□□□ 0.82
LMNA-216ENST00000496738 SNX21Q969T3 373 aa20.15■□□□□ 0.82
LMNA-216ENST00000496738 GOLGB1Q14789 3259 aaKnown RBP20.15■□□□□ 0.82
LMNA-216ENST00000496738 MAGEB6P1A0A0J9YX57 407 aa20.15■□□□□ 0.82
LMNA-216ENST00000496738 HAND2P61296 217 aa20.15■□□□□ 0.82
LMNA-216ENST00000496738 IL17RAQ96F46 866 aa20.15■□□□□ 0.82
LMNA-216ENST00000496738 MXD3Q9BW11 206 aa20.15■□□□□ 0.82
LMNA-216ENST00000496738 RTFDC1Q9BY42 306 aaPredicted RBP20.15■□□□□ 0.82
LMNA-216ENST00000496738 KCNQ5Q9NR82 932 aa20.15■□□□□ 0.82
LMNA-216ENST00000496738 ST18O60284 1047 aa20.14■□□□□ 0.82
LMNA-216ENST00000496738 FGAP02671 866 aa20.14■□□□□ 0.82
LMNA-216ENST00000496738 DIXDC1Q155Q3 683 aa20.14■□□□□ 0.82
LMNA-216ENST00000496738 SLC4A4Q9Y6R1 1079 aa20.14■□□□□ 0.82
LMNA-216ENST00000496738 CC2D2BQ6DHV5 1058 aa20.14■□□□□ 0.81
LMNA-216ENST00000496738 CCDC88AQ3V6T2 1871 aa20.13■□□□□ 0.81
LMNA-216ENST00000496738 ZBTB22O15209 634 aa20.13■□□□□ 0.81
LMNA-216ENST00000496738 AATFQ9NY61 560 aaKnown RBP eCLIP20.13■□□□□ 0.81
LMNA-216ENST00000496738 ECE2O60344 883 aa20.13■□□□□ 0.81
LMNA-216ENST00000496738 DALRD3Q5D0E6 543 aaKnown RBP20.13■□□□□ 0.81
LMNA-216ENST00000496738 EPB41L4AQ9HCS5 686 aaPredicted RBP20.13■□□□□ 0.81
LMNA-216ENST00000496738 PPIP5K2O43314 1243 aa20.12■□□□□ 0.81
LMNA-216ENST00000496738 STOX1Q6ZVD7 989 aa20.12■□□□□ 0.81
LMNA-216ENST00000496738 RIOK1Q9BRS2 568 aaKnown RBP20.12■□□□□ 0.81
LMNA-216ENST00000496738 F8W031 263 aaPredicted RBP20.12■□□□□ 0.81
LMNA-216ENST00000496738 NLGN2Q8NFZ4 835 aa20.12■□□□□ 0.81
LMNA-216ENST00000496738 SDR42E1Q8WUS8 393 aa20.12■□□□□ 0.81
LMNA-216ENST00000496738 TCEANC2Q96MN5 208 aa20.12■□□□□ 0.81
LMNA-216ENST00000496738 CD2APQ9Y5K6 639 aa20.12■□□□□ 0.81
LMNA-216ENST00000496738 FAM205AQ6ZU69 1335 aa20.12■□□□□ 0.81
LMNA-216ENST00000496738 K7ELQ4 463 aaPredicted RBP20.11■□□□□ 0.81
LMNA-216ENST00000496738 RTKN2Q8IZC4 609 aa20.11■□□□□ 0.81
LMNA-216ENST00000496738 SUPT20HQ8NEM7 779 aa20.11■□□□□ 0.81
LMNA-216ENST00000496738 LARP6Q9BRS8 491 aaKnown RBP20.11■□□□□ 0.81
LMNA-216ENST00000496738 RPAP1Q9BWH6 1393 aaPredicted RBP20.11■□□□□ 0.81
LMNA-216ENST00000496738 ZNF277Q9NRM2 450 aaPredicted RBP20.11■□□□□ 0.81
LMNA-216ENST00000496738 CTNNA3Q9UI47 895 aa20.11■□□□□ 0.81
LMNA-216ENST00000496738 GSG1L2A8MUP6 293 aa20.11■□□□□ 0.81
LMNA-216ENST00000496738 PATL2C9JE40 543 aaKnown RBP20.11■□□□□ 0.81
LMNA-216ENST00000496738 CERS5Q8N5B7 392 aa20.11■□□□□ 0.81
LMNA-216ENST00000496738 FOXD4L1Q9NU39 408 aa20.11■□□□□ 0.81
LMNA-216ENST00000496738 KIAA2012Q0VF49 1180 aa20.1■□□□□ 0.81
LMNA-216ENST00000496738 IMMTQ16891 758 aaKnown RBP20.1■□□□□ 0.81
LMNA-216ENST00000496738 IFNL3Q8IZI9 196 aa20.1■□□□□ 0.81
LMNA-216ENST00000496738 TBC1D22AQ8WUA7 517 aa20.1■□□□□ 0.81
LMNA-216ENST00000496738 SPON1Q9HCB6 807 aa20.1■□□□□ 0.81
LMNA-216ENST00000496738 BCS1LQ9Y276 419 aa20.1■□□□□ 0.81
LMNA-216ENST00000496738 BRCA1P38398 1863 aaKnown RBP20.1■□□□□ 0.81
LMNA-216ENST00000496738 ZSWIM6Q9HCJ5 1215 aa20.1■□□□□ 0.81
LMNA-216ENST00000496738 CYP46A1Q9Y6A2 500 aa20.1■□□□□ 0.81
LMNA-216ENST00000496738 TDO2P48775 406 aa20.09■□□□□ 0.81
LMNA-216ENST00000496738 TSGA10IPQ3SY00 556 aa20.09■□□□□ 0.81
LMNA-216ENST00000496738 PODNQ7Z5L7 613 aa20.09■□□□□ 0.81
LMNA-216ENST00000496738 NAPBQ9H115 298 aa20.09■□□□□ 0.81
LMNA-216ENST00000496738 SLKQ9H2G2 1235 aaPredicted RBP20.09■□□□□ 0.81
LMNA-216ENST00000496738 GNAT2P19087 354 aa20.08■□□□□ 0.81
LMNA-216ENST00000496738 PSMA5P28066 241 aa20.08■□□□□ 0.81
LMNA-216ENST00000496738 BLOC1S2Q6QNY1 142 aa20.08■□□□□ 0.81
LMNA-216ENST00000496738 RUFY3Q7L099 469 aa20.08■□□□□ 0.81
LMNA-216ENST00000496738 TM6SF1Q9BZW5 370 aa20.08■□□□□ 0.81
LMNA-216ENST00000496738 PDRG1Q9NUG6 133 aa20.08■□□□□ 0.81
LMNA-216ENST00000496738 E7EWF7 191 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms