RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 LY75O60449 1722 aa15.3■□□□□ 0.04
GARNL3-220ENST00000496711 SNAP23O00161 211 aa15.3■□□□□ 0.04
GARNL3-220ENST00000496711 RGL2O15211 777 aa15.3■□□□□ 0.04
GARNL3-220ENST00000496711 MSNP26038 577 aaKnown RBP15.3■□□□□ 0.04
GARNL3-220ENST00000496711 ALX1Q15699 326 aa15.3■□□□□ 0.04
GARNL3-220ENST00000496711 MAP3K11Q16584 847 aa15.3■□□□□ 0.04
GARNL3-220ENST00000496711 BICD2Q8TD16 824 aa15.3■□□□□ 0.04
GARNL3-220ENST00000496711 HPS5Q9UPZ3 1129 aa15.3■□□□□ 0.04
GARNL3-220ENST00000496711 MBD4O95243 580 aa15.29■□□□□ 0.04
GARNL3-220ENST00000496711 CCDC192P0DO97 292 aa15.29■□□□□ 0.04
GARNL3-220ENST00000496711 FDPSP14324 419 aaKnown RBP15.29■□□□□ 0.04
GARNL3-220ENST00000496711 ATL3Q6DD88 541 aa15.29■□□□□ 0.04
GARNL3-220ENST00000496711 PGBD1Q96JS3 809 aa15.29■□□□□ 0.04
GARNL3-220ENST00000496711 C8orf37Q96NL8 207 aa15.29■□□□□ 0.04
GARNL3-220ENST00000496711 CCDC39Q9UFE4 941 aa15.29■□□□□ 0.04
GARNL3-220ENST00000496711 ADD1P35611 737 aaKnown RBP15.29■□□□□ 0.04
GARNL3-220ENST00000496711 ERFEQ4G0M1 354 aa15.29■□□□□ 0.04
GARNL3-220ENST00000496711 NGLY1Q96IV0 654 aa15.29■□□□□ 0.04
GARNL3-220ENST00000496711 ZNF396Q96N95 335 aaPredicted RBP15.29■□□□□ 0.04
GARNL3-220ENST00000496711 DACT1Q9NYF0 836 aa15.29■□□□□ 0.04
GARNL3-220ENST00000496711 ANGEL1Q9UNK9 670 aaKnown RBP15.29■□□□□ 0.04
GARNL3-220ENST00000496711 BCAMP50895 628 aa15.28■□□□□ 0.04
GARNL3-220ENST00000496711 ANKRD18AQ8IVF6 992 aa15.28■□□□□ 0.04
GARNL3-220ENST00000496711 TNMDQ9H2S6 317 aa15.28■□□□□ 0.04
GARNL3-220ENST00000496711 CLSTN2Q9H4D0 955 aa15.28■□□□□ 0.04
GARNL3-220ENST00000496711 EPB41L4AQ9HCS5 686 aaPredicted RBP15.28■□□□□ 0.04
GARNL3-220ENST00000496711 NOL7Q9UMY1 257 aaKnown RBP15.28■□□□□ 0.04
GARNL3-220ENST00000496711 SBF2Q86WG5 1849 aa15.28■□□□□ 0.04
GARNL3-220ENST00000496711 CACNA1SQ13698 1873 aa15.28■□□□□ 0.04
GARNL3-220ENST00000496711 MAST2Q6P0Q8 1798 aa15.27■□□□□ 0.04
GARNL3-220ENST00000496711 PATL2C9JE40 543 aaKnown RBP15.27■□□□□ 0.04
GARNL3-220ENST00000496711 SH2B2O14492 632 aaPredicted RBP15.27■□□□□ 0.04
GARNL3-220ENST00000496711 CPLX1O14810 134 aa15.27■□□□□ 0.04
GARNL3-220ENST00000496711 SF3B3Q15393 1217 aaKnown RBP15.27■□□□□ 0.04
GARNL3-220ENST00000496711 CYB5R4Q7L1T6 521 aa15.27■□□□□ 0.04
GARNL3-220ENST00000496711 NAPBQ9H115 298 aa15.27■□□□□ 0.04
GARNL3-220ENST00000496711 NEDD4P46934 1319 aa15.27■□□□□ 0.04
GARNL3-220ENST00000496711 PNPLA7Q6ZV29 1317 aa15.27■□□□□ 0.04
GARNL3-220ENST00000496711 PPFIA3O75145 1194 aa15.27■□□□□ 0.03
GARNL3-220ENST00000496711 GNAT2P19087 354 aa15.27■□□□□ 0.03
GARNL3-220ENST00000496711 GUCY1B3Q02153 619 aa15.27■□□□□ 0.03
GARNL3-220ENST00000496711 RBM43Q6ZSC3 357 aaKnown RBP15.27■□□□□ 0.03
GARNL3-220ENST00000496711 IFNL3Q8IZI9 196 aa15.27■□□□□ 0.03
GARNL3-220ENST00000496711 TMEM87BQ96K49 555 aa15.27■□□□□ 0.03
GARNL3-220ENST00000496711 ARMT1Q9H993 441 aa15.27■□□□□ 0.03
GARNL3-220ENST00000496711 USP25Q9UHP3 1055 aa15.27■□□□□ 0.03
GARNL3-220ENST00000496711 RCOR1Q9UKL0 485 aa15.27■□□□□ 0.03
GARNL3-220ENST00000496711 DENND2AQ9ULE3 1009 aa15.27■□□□□ 0.03
GARNL3-220ENST00000496711 ZNF804BA4D1E1 1349 aa15.27■□□□□ 0.03
GARNL3-220ENST00000496711 B4E1Z4 1266 aa15.26■□□□□ 0.03
GARNL3-220ENST00000496711 CAMK4Q16566 473 aa15.26■□□□□ 0.03
GARNL3-220ENST00000496711 ILDR1Q86SU0 546 aaPredicted RBP15.26■□□□□ 0.03
GARNL3-220ENST00000496711 C8orf76Q96K31 380 aa15.26■□□□□ 0.03
GARNL3-220ENST00000496711 USP28Q96RU2 1077 aa15.26■□□□□ 0.03
GARNL3-220ENST00000496711 ORC3Q9UBD5 711 aaPredicted RBP15.26■□□□□ 0.03
GARNL3-220ENST00000496711 COL1A1P02452 1464 aaPredicted RBP15.25■□□□□ 0.03
GARNL3-220ENST00000496711 NR1I2O75469 434 aa15.25■□□□□ 0.03
GARNL3-220ENST00000496711 CEBPZQ03701 1054 aaKnown RBP15.25■□□□□ 0.03
GARNL3-220ENST00000496711 C3orf67Q6ZVT6 689 aa15.25■□□□□ 0.03
GARNL3-220ENST00000496711 RAB11FIP4Q86YS3 637 aa15.25■□□□□ 0.03
GARNL3-220ENST00000496711 BSDC1Q9NW68 430 aaPredicted RBP15.25■□□□□ 0.03
GARNL3-220ENST00000496711 ZKSCAN5Q9Y2L8 839 aa15.25■□□□□ 0.03
GARNL3-220ENST00000496711 UBAP1LF5GYI3 381 aa15.25■□□□□ 0.03
GARNL3-220ENST00000496711 METAP2P50579 478 aaKnown RBP eCLIP15.25■□□□□ 0.03
GARNL3-220ENST00000496711 KCNQ4P56696 695 aa15.25■□□□□ 0.03
GARNL3-220ENST00000496711 TYRO3Q06418 890 aa15.25■□□□□ 0.03
GARNL3-220ENST00000496711 UBE4AQ14139 1066 aa15.25■□□□□ 0.03
GARNL3-220ENST00000496711 RC3H1Q5TC82 1133 aaKnown RBP15.25■□□□□ 0.03
GARNL3-220ENST00000496711 TBC1D9BQ66K14 1250 aa15.25■□□□□ 0.03
GARNL3-220ENST00000496711 LCORLQ8N3X6 602 aa15.25■□□□□ 0.03
GARNL3-220ENST00000496711 RGS22Q8NE09 1264 aa15.25■□□□□ 0.03
GARNL3-220ENST00000496711 NACAP1Q9BZK3 213 aa15.25■□□□□ 0.03
GARNL3-220ENST00000496711 FTOQ9C0B1 505 aaKnown RBP eCLIP15.25■□□□□ 0.03
GARNL3-220ENST00000496711 CNNM2Q9H8M5 875 aa15.25■□□□□ 0.03
GARNL3-220ENST00000496711 GNL3LQ9NVN8 582 aaKnown RBP15.25■□□□□ 0.03
GARNL3-220ENST00000496711 LRP2BPQ9P2M1 347 aa15.25■□□□□ 0.03
GARNL3-220ENST00000496711 CCDC88AQ3V6T2 1871 aa15.24■□□□□ 0.03
GARNL3-220ENST00000496711 LAMB1P07942 1786 aa15.24■□□□□ 0.03
GARNL3-220ENST00000496711 GSG1L2A8MUP6 293 aa15.24■□□□□ 0.03
GARNL3-220ENST00000496711 CDKL5O76039 1030 aa15.24■□□□□ 0.03
GARNL3-220ENST00000496711 PTMAP06454 111 aaKnown RBP15.24■□□□□ 0.03
GARNL3-220ENST00000496711 APOA5Q6Q788 366 aa15.24■□□□□ 0.03
GARNL3-220ENST00000496711 BICDL1Q6ZP65 573 aa15.24■□□□□ 0.03
GARNL3-220ENST00000496711 FNBP4Q8N3X1 1017 aaPredicted RBP15.24■□□□□ 0.03
GARNL3-220ENST00000496711 FBXO18Q8NFZ0 1043 aa15.24■□□□□ 0.03
GARNL3-220ENST00000496711 NKX2-3Q8TAU0 364 aa15.24■□□□□ 0.03
GARNL3-220ENST00000496711 FAM200AQ8TCP9 573 aa15.24■□□□□ 0.03
GARNL3-220ENST00000496711 NYXQ9GZU5 481 aa15.24■□□□□ 0.03
GARNL3-220ENST00000496711 BCL2L12Q9HB09 334 aa15.24■□□□□ 0.03
GARNL3-220ENST00000496711 NARFQ9UHQ1 456 aa15.24■□□□□ 0.03
GARNL3-220ENST00000496711 MRVI1Q9Y6F6 885 aa15.24■□□□□ 0.03
GARNL3-220ENST00000496711 BAZ2AQ9UIF9 1905 aaKnown RBP15.24■□□□□ 0.03
GARNL3-220ENST00000496711 TNRC6CQ9HCJ0 1690 aaKnown RBP15.23■□□□□ 0.03
GARNL3-220ENST00000496711 KDM4AO75164 1064 aa15.23■□□□□ 0.03
GARNL3-220ENST00000496711 GTF2E1P29083 439 aaPredicted RBP15.23■□□□□ 0.03
GARNL3-220ENST00000496711 TDO2P48775 406 aa15.23■□□□□ 0.03
GARNL3-220ENST00000496711 SLC10A5Q5PT55 438 aa15.23■□□□□ 0.03
GARNL3-220ENST00000496711 SGMS1Q86VZ5 419 aa15.23■□□□□ 0.03
GARNL3-220ENST00000496711 CKAP2LQ8IYA6 745 aa15.23■□□□□ 0.03
GARNL3-220ENST00000496711 KRT23Q9C075 422 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms