RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 GPAA1O43292 621 aa17.3■□□□□ 0.36
UBXN11-215ENST00000494942 SKILP12757 684 aa17.3■□□□□ 0.36
UBXN11-215ENST00000494942 PPP4R3BQ5MIZ7 849 aa17.3■□□□□ 0.36
UBXN11-215ENST00000494942 CCDC112Q8NEF3 446 aa17.3■□□□□ 0.36
UBXN11-215ENST00000494942 CARD10Q9BWT7 1032 aa17.3■□□□□ 0.36
UBXN11-215ENST00000494942 PUS7LQ9H0K6 701 aaKnown RBP17.3■□□□□ 0.36
UBXN11-215ENST00000494942 IMPACTQ9P2X3 320 aa17.3■□□□□ 0.36
UBXN11-215ENST00000494942 MYH7P12883 1935 aa17.3■□□□□ 0.36
UBXN11-215ENST00000494942 TRDNQ13061 729 aa17.3■□□□□ 0.36
UBXN11-215ENST00000494942 SCARF1Q14162 830 aa17.3■□□□□ 0.36
UBXN11-215ENST00000494942 DHX8Q14562 1220 aaKnown RBP17.3■□□□□ 0.36
UBXN11-215ENST00000494942 KCND1Q9NSA2 647 aa17.3■□□□□ 0.36
UBXN11-215ENST00000494942 POLR3DP05423 398 aaPredicted RBP17.29■□□□□ 0.36
UBXN11-215ENST00000494942 ANTXR2P58335 489 aa17.29■□□□□ 0.36
UBXN11-215ENST00000494942 CEP135Q66GS9 1140 aa17.29■□□□□ 0.36
UBXN11-215ENST00000494942 ZNF512BQ96KM6 892 aaPredicted RBP17.29■□□□□ 0.36
UBXN11-215ENST00000494942 CCDC69A6NI79 296 aa17.29■□□□□ 0.36
UBXN11-215ENST00000494942 TTF1Q15361 905 aaPredicted RBP17.29■□□□□ 0.36
UBXN11-215ENST00000494942 ATP2B3Q16720 1220 aa17.29■□□□□ 0.36
UBXN11-215ENST00000494942 OTUD7BQ6GQQ9 843 aa17.29■□□□□ 0.36
UBXN11-215ENST00000494942 CDHR2Q9BYE9 1310 aa17.28■□□□□ 0.36
UBXN11-215ENST00000494942 CMA1P23946 247 aa17.28■□□□□ 0.36
UBXN11-215ENST00000494942 TPM4P67936 248 aa17.28■□□□□ 0.36
UBXN11-215ENST00000494942 ANO1Q5XXA6 986 aa17.28■□□□□ 0.36
UBXN11-215ENST00000494942 FILIP1Q7Z7B0 1213 aa17.28■□□□□ 0.36
UBXN11-215ENST00000494942 FAM89AQ96GI7 184 aa17.28■□□□□ 0.36
UBXN11-215ENST00000494942 OSBPL5Q9H0X9 879 aaPredicted RBP17.28■□□□□ 0.36
UBXN11-215ENST00000494942 CDKL5O76039 1030 aa17.27■□□□□ 0.36
UBXN11-215ENST00000494942 SLC3A2P08195 630 aaKnown RBP17.27■□□□□ 0.36
UBXN11-215ENST00000494942 CCZ1BP86790 482 aa17.27■□□□□ 0.36
UBXN11-215ENST00000494942 CCZ1P86791 482 aaPredicted RBP17.27■□□□□ 0.36
UBXN11-215ENST00000494942 KIF23Q02241 960 aaPredicted RBP17.27■□□□□ 0.36
UBXN11-215ENST00000494942 METTL24Q5JXM2 366 aa17.27■□□□□ 0.36
UBXN11-215ENST00000494942 TMOD3Q9NYL9 352 aa17.27■□□□□ 0.36
UBXN11-215ENST00000494942 RIPOR2Q9Y4F9 1068 aa17.27■□□□□ 0.36
UBXN11-215ENST00000494942 ATRNO75882 1429 aa17.27■□□□□ 0.36
UBXN11-215ENST00000494942 SHANK3Q9BYB0 1731 aa17.27■□□□□ 0.36
UBXN11-215ENST00000494942 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.27■□□□□ 0.35
UBXN11-215ENST00000494942 PTPN14Q15678 1187 aa17.27■□□□□ 0.35
UBXN11-215ENST00000494942 NYAP1Q6ZVC0 841 aa17.27■□□□□ 0.35
UBXN11-215ENST00000494942 ANGEL1Q9UNK9 670 aaKnown RBP17.27■□□□□ 0.35
UBXN11-215ENST00000494942 ZMYM6O95789 1325 aa17.27■□□□□ 0.35
UBXN11-215ENST00000494942 ZNF202O95125 648 aa17.26■□□□□ 0.35
UBXN11-215ENST00000494942 ADD2P35612 726 aa17.26■□□□□ 0.35
UBXN11-215ENST00000494942 NLRP12P59046 1061 aa17.26■□□□□ 0.35
UBXN11-215ENST00000494942 NCBP1Q09161 790 aaKnown RBP17.26■□□□□ 0.35
UBXN11-215ENST00000494942 ARID5BQ14865 1188 aa17.26■□□□□ 0.35
UBXN11-215ENST00000494942 RIC1Q4ADV7 1423 aa17.26■□□□□ 0.35
UBXN11-215ENST00000494942 A0A087WWV3 80 aa17.26■□□□□ 0.35
UBXN11-215ENST00000494942 KIF2AO00139 706 aaPredicted RBP17.26■□□□□ 0.35
UBXN11-215ENST00000494942 DPCR1Q3MIW9 517 aa17.26■□□□□ 0.35
UBXN11-215ENST00000494942 CPLX2Q6PUV4 134 aaKnown RBP17.26■□□□□ 0.35
UBXN11-215ENST00000494942 LDHAL6AQ6ZMR3 332 aa17.26■□□□□ 0.35
UBXN11-215ENST00000494942 ERCC4Q92889 916 aaPredicted RBP17.26■□□□□ 0.35
UBXN11-215ENST00000494942 TIGD1Q96MW7 591 aa17.26■□□□□ 0.35
UBXN11-215ENST00000494942 ZNF330Q9Y3S2 320 aaPredicted RBP17.26■□□□□ 0.35
UBXN11-215ENST00000494942 NEDD4P46934 1319 aa17.26■□□□□ 0.35
UBXN11-215ENST00000494942 C4AP0C0L4 1744 aa17.25■□□□□ 0.35
UBXN11-215ENST00000494942 C4BP0C0L5 1744 aa17.25■□□□□ 0.35
UBXN11-215ENST00000494942 STARD3NLO95772 234 aa17.25■□□□□ 0.35
UBXN11-215ENST00000494942 MCAMP43121 646 aa17.25■□□□□ 0.35
UBXN11-215ENST00000494942 SLC39A14Q15043 492 aa17.25■□□□□ 0.35
UBXN11-215ENST00000494942 UBE3CQ15386 1083 aa17.25■□□□□ 0.35
UBXN11-215ENST00000494942 AXDND1Q5T1B0 1012 aaPredicted RBP17.25■□□□□ 0.35
UBXN11-215ENST00000494942 GIGYF2Q6Y7W6 1299 aaKnown RBP17.25■□□□□ 0.35
UBXN11-215ENST00000494942 CCDC85AQ96PX6 553 aaPredicted RBP17.25■□□□□ 0.35
UBXN11-215ENST00000494942 FEZ1Q99689 392 aa17.25■□□□□ 0.35
UBXN11-215ENST00000494942 MAP3K15Q6ZN16 1313 aa17.25■□□□□ 0.35
UBXN11-215ENST00000494942 HSP90AB3PQ58FF7 597 aa17.25■□□□□ 0.35
UBXN11-215ENST00000494942 PI16Q6UXB8 463 aa17.25■□□□□ 0.35
UBXN11-215ENST00000494942 JMYQ8N9B5 988 aa17.25■□□□□ 0.35
UBXN11-215ENST00000494942 CCDC150Q8NCX0 1101 aa17.25■□□□□ 0.35
UBXN11-215ENST00000494942 ANKRD18BA2A2Z9 1011 aa17.24■□□□□ 0.35
UBXN11-215ENST00000494942 KIF28PB7ZC32 967 aa17.24■□□□□ 0.35
UBXN11-215ENST00000494942 ITGA6P23229 1130 aa17.24■□□□□ 0.35
UBXN11-215ENST00000494942 METAP2P50579 478 aaKnown RBP eCLIP17.24■□□□□ 0.35
UBXN11-215ENST00000494942 SLC9C2Q5TAH2 1124 aa17.24■□□□□ 0.35
UBXN11-215ENST00000494942 NBPF11Q86T75 865 aa17.24■□□□□ 0.35
UBXN11-215ENST00000494942 CCAR2Q8N163 923 aaKnown RBP17.24■□□□□ 0.35
UBXN11-215ENST00000494942 PPP6R2O75170 966 aa17.24■□□□□ 0.35
UBXN11-215ENST00000494942 PFKFB1P16118 471 aa17.24■□□□□ 0.35
UBXN11-215ENST00000494942 TTLL11Q8NHH1 800 aa17.24■□□□□ 0.35
UBXN11-215ENST00000494942 FBXW7Q969H0 707 aa17.24■□□□□ 0.35
UBXN11-215ENST00000494942 TMEM87BQ96K49 555 aa17.24■□□□□ 0.35
UBXN11-215ENST00000494942 PKNOX2Q96KN3 472 aa17.24■□□□□ 0.35
UBXN11-215ENST00000494942 CGNQ9P2M7 1197 aaKnown RBP17.24■□□□□ 0.35
UBXN11-215ENST00000494942 AKAP11Q9UKA4 1901 aa17.23■□□□□ 0.35
UBXN11-215ENST00000494942 SH2B2O14492 632 aaPredicted RBP17.23■□□□□ 0.35
UBXN11-215ENST00000494942 IKBKBO14920 756 aa17.23■□□□□ 0.35
UBXN11-215ENST00000494942 ZNF592Q92610 1267 aa17.23■□□□□ 0.35
UBXN11-215ENST00000494942 ALG1Q9BT22 464 aa17.23■□□□□ 0.35
UBXN11-215ENST00000494942 NBPF3Q9H094 633 aa17.23■□□□□ 0.35
UBXN11-215ENST00000494942 CNNM1Q9NRU3 951 aa17.23■□□□□ 0.35
UBXN11-215ENST00000494942 USP27XA6NNY8 438 aa17.22■□□□□ 0.35
UBXN11-215ENST00000494942 NRDCO43847 1150 aa17.22■□□□□ 0.35
UBXN11-215ENST00000494942 DNAJC10Q8IXB1 793 aa17.22■□□□□ 0.35
UBXN11-215ENST00000494942 TBC1D2BQ9UPU7 963 aa17.22■□□□□ 0.35
UBXN11-215ENST00000494942 TOGARAM1Q9Y4F4 1720 aa17.22■□□□□ 0.35
UBXN11-215ENST00000494942 KCNJ6P48051 423 aa17.22■□□□□ 0.35
UBXN11-215ENST00000494942 CTSWP56202 376 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms