RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 IPO8O15397 1037 aaKnown RBP3.18□□□□□ -1.9
MDC1-208ENST00000494654 TOM1O60784 492 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 GADD45BO75293 160 aaPredicted RBP3.18□□□□□ -1.9
MDC1-208ENST00000494654 TADA3O75528 432 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 TBC1D8O95759 1140 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 F13A1P00488 732 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 ERCC3P19447 782 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 CASTP20810 708 aaKnown RBP3.18□□□□□ -1.9
MDC1-208ENST00000494654 CTHP32929 405 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 GJA5P36382 358 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 EIF5P55010 431 aaKnown RBP3.18□□□□□ -1.9
MDC1-208ENST00000494654 ST5P78524 1137 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 CCZ1BP86790 482 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 CCZ1P86791 482 aaPredicted RBP3.18□□□□□ -1.9
MDC1-208ENST00000494654 SETQ01105 290 aaPredicted RBP3.18□□□□□ -1.9
MDC1-208ENST00000494654 TYRO3Q06418 890 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 FOXC1Q12948 553 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 SEMA3FQ13275 785 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 SNW1Q13573 536 aaKnown RBP3.18□□□□□ -1.9
MDC1-208ENST00000494654 MAP3K11Q16584 847 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 TUSC1Q2TAM9 212 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 CCDC93Q567U6 631 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 C4orf48Q5BLP8 95 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 PRPF38BQ5VTL8 546 aaKnown RBP3.18□□□□□ -1.9
MDC1-208ENST00000494654 LRCH2Q5VUJ6 765 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 JAKMIP3Q5VZ66 844 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 SPRYD7Q5W111 196 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 EP400NLQ6ZTU2 488 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 CCDC186Q7Z3E2 898 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 USP48Q86UV5 1035 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 TCP11L2Q8N4U5 519 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 GPATCH11Q8N954 259 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 CCDC150Q8NCX0 1101 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.18□□□□□ -1.9
MDC1-208ENST00000494654 BAP1Q92560 729 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 SGSM3Q96HU1 749 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 TMX3Q96JJ7 454 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 FAM210AQ96ND0 272 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 EIF3CQ99613 913 aaKnown RBP3.18□□□□□ -1.9
MDC1-208ENST00000494654 OCSTAMPQ9BR26 566 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 SRCIN1Q9C0H9 1055 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 NUP62CLQ9H1M0 184 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 TOMM22Q9NS69 142 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 DDX19AQ9NUU7 478 aaKnown RBP3.18□□□□□ -1.9
MDC1-208ENST00000494654 PKD2L1Q9P0L9 805 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.18□□□□□ -1.91e-7■■□□□ 11.5
MDC1-208ENST00000494654 MRVI1Q9Y6F6 885 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 MYH3P11055 1940 aa3.18□□□□□ -1.9
MDC1-208ENST00000494654 MARF1Q9Y4F3 1742 aaKnown RBP3.18□□□□□ -1.9
MDC1-208ENST00000494654 DLEC1Q9Y238 1755 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 ARHGEF10O15013 1369 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 KDRP35968 1356 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 KIAA0232Q92628 1395 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 TJP1Q07157 1748 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 PEAK1Q9H792 1746 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 CCDC151A5D8V7 595 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 PLEKHD1A6NEE1 506 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 EFCAB8A8MWE9 144 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 CTAGE5O15320 804 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 SMARCA5O60264 1052 aaPredicted RBP3.17□□□□□ -1.9
MDC1-208ENST00000494654 EIF3JO75822 258 aaKnown RBP3.17□□□□□ -1.9
MDC1-208ENST00000494654 SMC2O95347 1197 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 HMGB1P09429 215 aaKnown RBP3.17□□□□□ -1.9
MDC1-208ENST00000494654 CCNYL3P0C7X3 344 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 ZSCAN22P10073 491 aaPredicted RBP3.17□□□□□ -1.9
MDC1-208ENST00000494654 LMAN1P49257 510 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 GSDMDP57764 484 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 SH3BP2P78314 561 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 ICA1Q05084 483 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 PSME1Q06323 249 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 KCNH2Q12809 1159 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 LRMPQ12912 555 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 TRIM32Q13049 653 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 PPP2R5AQ15172 486 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 DIXDC1Q155Q3 683 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 PTPRNQ16849 979 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 ARHGAP29Q52LW3 1261 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 ZNF697Q5TEC3 545 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 CC2D1AQ6P1N0 951 aaPredicted RBP3.17□□□□□ -1.9
MDC1-208ENST00000494654 FCHSD1Q86WN1 690 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 FMNL3Q8IVF7 1028 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 PLEKHM2Q8IWE5 1019 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 LRRC8AQ8IWT6 810 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 CCAR2Q8N163 923 aaKnown RBP3.17□□□□□ -1.9
MDC1-208ENST00000494654 MPNDQ8N594 471 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 OTUD6BQ8N6M0 293 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 MTMR14Q8NCE2 650 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 FAM71BQ8TC56 605 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 CACTINQ8WUQ7 758 aaKnown RBP3.17□□□□□ -1.9
MDC1-208ENST00000494654 SSH1Q8WYL5 1049 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 ARHGAP45Q92619 1136 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 FOXJ1Q92949 421 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 ITFG2Q969R8 447 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 GJD4Q96KN9 370 aaPredicted RBP3.17□□□□□ -1.9
MDC1-208ENST00000494654 CFAP53Q96M91 514 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 OSBPL5Q9H0X9 879 aaPredicted RBP3.17□□□□□ -1.9
MDC1-208ENST00000494654 UNC93B1Q9H1C4 597 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 GOPCQ9HD26 462 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 EVA1BQ9NVM1 165 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 GNL3LQ9NVN8 582 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms