RNA–Protein interactions for RNA: ENST00000494647.2

NDFIP2-204, Transcript of Nedd4 family interacting protein 2, humanhuman

TSL 5

Gene NDFIP2, Length 344 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-204ENST00000494647 PCMTD2Q9NV79 361 aa6.59□□□□□ -1.35
NDFIP2-204ENST00000494647 BAZ1AQ9NRL2 1556 aaPredicted RBP6.58□□□□□ -1.36
NDFIP2-204ENST00000494647 SSTR4P31391 388 aa6.58□□□□□ -1.36
NDFIP2-204ENST00000494647 KIAA0319Q5VV43 1072 aa6.58□□□□□ -1.36
NDFIP2-204ENST00000494647 RNF43Q68DV7 783 aa6.58□□□□□ -1.36
NDFIP2-204ENST00000494647 C12orf50Q8NA57 414 aaPredicted RBP6.58□□□□□ -1.36
NDFIP2-204ENST00000494647 SMG8Q8ND04 991 aaKnown RBP6.58□□□□□ -1.36
NDFIP2-204ENST00000494647 DMRTB1Q96MA1 342 aa6.58□□□□□ -1.36
NDFIP2-204ENST00000494647 FAM83CQ9BQN1 747 aa6.58□□□□□ -1.36
NDFIP2-204ENST00000494647 NIF3L1Q9GZT8 377 aa6.58□□□□□ -1.36
NDFIP2-204ENST00000494647 DNAJC25Q9H1X3 360 aa6.58□□□□□ -1.36
NDFIP2-204ENST00000494647 SUGCTQ9HAC7 445 aa6.58□□□□□ -1.36
NDFIP2-204ENST00000494647 PDS5BQ9NTI5 1447 aa6.58□□□□□ -1.36
NDFIP2-204ENST00000494647 SOWAHDA6NJG2 315 aa6.57□□□□□ -1.36
NDFIP2-204ENST00000494647 EIF1AYO14602 144 aaKnown RBP6.57□□□□□ -1.36
NDFIP2-204ENST00000494647 TIAF1O95411 115 aa6.57□□□□□ -1.36
NDFIP2-204ENST00000494647 DLGAP3O95886 979 aa6.57□□□□□ -1.36
NDFIP2-204ENST00000494647 TGFB1P01137 390 aa6.57□□□□□ -1.36
NDFIP2-204ENST00000494647 RXRBP28702 533 aa6.57□□□□□ -1.36
NDFIP2-204ENST00000494647 SGO2Q562F6 1265 aa6.57□□□□□ -1.36
NDFIP2-204ENST00000494647 EXOSC6Q5RKV6 272 aaKnown RBP6.57□□□□□ -1.36
NDFIP2-204ENST00000494647 DDX54Q8TDD1 881 aaKnown RBP6.57□□□□□ -1.36
NDFIP2-204ENST00000494647 BIN2Q9UBW5 565 aaPredicted RBP6.57□□□□□ -1.36
NDFIP2-204ENST00000494647 MRC2Q9UBG0 1479 aa6.57□□□□□ -1.36
NDFIP2-204ENST00000494647 GADD45BO75293 160 aaPredicted RBP6.56□□□□□ -1.36
NDFIP2-204ENST00000494647 IGHA2P01877 340 aa6.56□□□□□ -1.36
NDFIP2-204ENST00000494647 CYP11A1P05108 521 aa6.56□□□□□ -1.36
NDFIP2-204ENST00000494647 MAP4P27816 1152 aaKnown RBP6.56□□□□□ -1.36
NDFIP2-204ENST00000494647 CD97P48960 835 aa6.56□□□□□ -1.36
NDFIP2-204ENST00000494647 ZNF423Q2M1K9 1284 aa6.56□□□□□ -1.36
NDFIP2-204ENST00000494647 HP1BP3Q5SSJ5 553 aaPredicted RBP6.56□□□□□ -1.36
NDFIP2-204ENST00000494647 ZDHHC13Q8IUH4 622 aa6.56□□□□□ -1.36
NDFIP2-204ENST00000494647 CCDC74AQ96AQ1 378 aa6.56□□□□□ -1.36
NDFIP2-204ENST00000494647 RBCK1Q9BYM8 510 aa6.56□□□□□ -1.36
NDFIP2-204ENST00000494647 NRSN2Q9GZP1 204 aa6.56□□□□□ -1.36
NDFIP2-204ENST00000494647 ZNF576Q9H609 170 aa6.56□□□□□ -1.36
NDFIP2-204ENST00000494647 PEG3Q9GZU2 1588 aa6.56□□□□□ -1.36
NDFIP2-204ENST00000494647 CADPSQ9ULU8 1353 aa6.56□□□□□ -1.36
NDFIP2-204ENST00000494647 COBLO75128 1261 aa6.55□□□□□ -1.36
NDFIP2-204ENST00000494647 BRD1O95696 1058 aa6.55□□□□□ -1.36
NDFIP2-204ENST00000494647 B3GALT4O96024 378 aa6.55□□□□□ -1.36
NDFIP2-204ENST00000494647 ITPKAP23677 461 aa6.55□□□□□ -1.36
NDFIP2-204ENST00000494647 MAOBP27338 520 aa6.55□□□□□ -1.36
NDFIP2-204ENST00000494647 POU4F3Q15319 338 aa6.55□□□□□ -1.36
NDFIP2-204ENST00000494647 ALKBH8Q96BT7 664 aaKnown RBP6.55□□□□□ -1.36
NDFIP2-204ENST00000494647 ZFYVE1Q9HBF4 777 aa6.55□□□□□ -1.36
NDFIP2-204ENST00000494647 GNEQ9Y223 722 aaKnown RBP6.55□□□□□ -1.36
NDFIP2-204ENST00000494647 WDR62O43379 1518 aa6.55□□□□□ -1.36
NDFIP2-204ENST00000494647 WIZO95785 1651 aa6.55□□□□□ -1.36
NDFIP2-204ENST00000494647 DRD2P14416 443 aa6.54□□□□□ -1.36
NDFIP2-204ENST00000494647 GRIK1P39086 918 aa6.54□□□□□ -1.36
NDFIP2-204ENST00000494647 USP11P51784 963 aa6.54□□□□□ -1.36
NDFIP2-204ENST00000494647 PRPF40BQ6NWY9 871 aaKnown RBP6.54□□□□□ -1.36
NDFIP2-204ENST00000494647 SHKBP1Q8TBC3 707 aa6.54□□□□□ -1.36
NDFIP2-204ENST00000494647 CSRNP1Q96S65 589 aa6.54□□□□□ -1.36
NDFIP2-204ENST00000494647 CORO1BQ9BR76 489 aa6.54□□□□□ -1.36
NDFIP2-204ENST00000494647 ABCB6Q9NP58 842 aa6.54□□□□□ -1.36
NDFIP2-204ENST00000494647 TRAK1Q9UPV9 953 aa6.54□□□□□ -1.36
NDFIP2-204ENST00000494647 ADH5P11766 374 aa6.53□□□□□ -1.36
NDFIP2-204ENST00000494647 PTPN12Q05209 780 aaKnown RBP6.53□□□□□ -1.36
NDFIP2-204ENST00000494647 SOX4Q06945 474 aaPredicted RBP6.53□□□□□ -1.36
NDFIP2-204ENST00000494647 TMC7Q7Z402 723 aa6.53□□□□□ -1.36
NDFIP2-204ENST00000494647 C2CD4AQ8NCU7 369 aaPredicted RBP6.53□□□□□ -1.36
NDFIP2-204ENST00000494647 MFSD14AQ96MC6 490 aa6.53□□□□□ -1.36
NDFIP2-204ENST00000494647 TRIM56Q9BRZ2 755 aaKnown RBP6.53□□□□□ -1.36
NDFIP2-204ENST00000494647 YIPF2Q9BWQ6 316 aa6.53□□□□□ -1.36
NDFIP2-204ENST00000494647 DCTN4Q9UJW0 460 aa6.53□□□□□ -1.36
NDFIP2-204ENST00000494647 FAM95CA0A1B0GW59 222 aa6.52□□□□□ -1.37
NDFIP2-204ENST00000494647 KIAA1324LA8MWY0 1029 aaPredicted RBP6.52□□□□□ -1.37
NDFIP2-204ENST00000494647 WDR64B1ANS9 1081 aa6.52□□□□□ -1.37
NDFIP2-204ENST00000494647 CTSBP07858 339 aa6.52□□□□□ -1.37
NDFIP2-204ENST00000494647 INTS5Q6P9B9 1019 aaKnown RBP6.52□□□□□ -1.37
NDFIP2-204ENST00000494647 PAOXQ6QHF9 649 aa6.52□□□□□ -1.37
NDFIP2-204ENST00000494647 GIMAP7Q8NHV1 300 aa6.52□□□□□ -1.37
NDFIP2-204ENST00000494647 EPS8L3Q8TE67 593 aaKnown RBP6.52□□□□□ -1.37
NDFIP2-204ENST00000494647 FBLIM1Q8WUP2 373 aa6.52□□□□□ -1.37
NDFIP2-204ENST00000494647 RAD18Q9NS91 495 aa6.52□□□□□ -1.37
NDFIP2-204ENST00000494647 TMEM238LA0A1B0GVL6 79 aa6.51□□□□□ -1.37
NDFIP2-204ENST00000494647 PRR19A6NJB7 356 aa6.51□□□□□ -1.37
NDFIP2-204ENST00000494647 MAPK1P28482 360 aa6.51□□□□□ -1.37
NDFIP2-204ENST00000494647 AP3B2Q13367 1082 aa6.51□□□□□ -1.37
NDFIP2-204ENST00000494647 GRM2Q14416 872 aa6.51□□□□□ -1.37
NDFIP2-204ENST00000494647 PDE3AQ14432 1141 aa6.51□□□□□ -1.37
NDFIP2-204ENST00000494647 NFKBIBQ15653 356 aa6.51□□□□□ -1.37
NDFIP2-204ENST00000494647 AKAP4Q5JQC9 854 aa6.51□□□□□ -1.37
NDFIP2-204ENST00000494647 CDPF1Q6NVV7 123 aa6.51□□□□□ -1.37
NDFIP2-204ENST00000494647 FBXL6Q8N531 539 aa6.51□□□□□ -1.37
NDFIP2-204ENST00000494647 ATG3Q9NT62 314 aa6.51□□□□□ -1.37
NDFIP2-204ENST00000494647 NLRP2Q9NX02 1062 aa6.51□□□□□ -1.37
NDFIP2-204ENST00000494647 AP4E1Q9UPM8 1137 aa6.51□□□□□ -1.37
NDFIP2-204ENST00000494647 FANCD2Q9BXW9 1451 aa6.51□□□□□ -1.37
NDFIP2-204ENST00000494647 RIMBP3CA6NJZ7 1639 aa6.5□□□□□ -1.37
NDFIP2-204ENST00000494647 RIMBP3BA6NNM3 1639 aa6.5□□□□□ -1.37
NDFIP2-204ENST00000494647 RIMBP3Q9UFD9 1639 aa6.5□□□□□ -1.37
NDFIP2-204ENST00000494647 CEP164Q9UPV0 1460 aa6.5□□□□□ -1.37
NDFIP2-204ENST00000494647 MED26O95402 600 aa6.5□□□□□ -1.37
NDFIP2-204ENST00000494647 ECEL1O95672 775 aa6.5□□□□□ -1.37
NDFIP2-204ENST00000494647 RPS26P11Q5JNZ5 115 aaPredicted RBP6.5□□□□□ -1.37
NDFIP2-204ENST00000494647 ACTL7BQ9Y614 415 aa6.5□□□□□ -1.37
NDFIP2-204ENST00000494647 URB2Q14146 1524 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms