RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 GNAT3A8MTJ3 354 aa10.77□□□□□ -0.69
RIF1-211ENST00000494333 POTECB2RU33 542 aa10.77□□□□□ -0.69
RIF1-211ENST00000494333 U2AF1L5P0DN76 240 aaPredicted RBP10.77□□□□□ -0.69
RIF1-211ENST00000494333 PRKAR2BP31323 418 aa10.77□□□□□ -0.69
RIF1-211ENST00000494333 RFC4P35249 363 aa10.77□□□□□ -0.69
RIF1-211ENST00000494333 CRKLP46109 303 aaKnown RBP10.77□□□□□ -0.69
RIF1-211ENST00000494333 U2AF1Q01081 240 aaKnown RBP eCLIP10.77□□□□□ -0.69
RIF1-211ENST00000494333 FOXD4L5Q5VV16 416 aaPredicted RBP10.77□□□□□ -0.69
RIF1-211ENST00000494333 GAS2L2Q8NHY3 880 aa10.77□□□□□ -0.69
RIF1-211ENST00000494333 PHACTR3Q96KR7 559 aa10.77□□□□□ -0.69
RIF1-211ENST00000494333 ZNF358Q9NW07 568 aa10.77□□□□□ -0.69
RIF1-211ENST00000494333 SERTAD1Q9UHV2 236 aa10.77□□□□□ -0.69
RIF1-211ENST00000494333 CD2APQ9Y5K6 639 aa10.77□□□□□ -0.69
RIF1-211ENST00000494333 HRH3Q9Y5N1 445 aa10.77□□□□□ -0.69
RIF1-211ENST00000494333 QSER1Q2KHR3 1735 aa10.77□□□□□ -0.69
RIF1-211ENST00000494333 CNTNAP4Q9C0A0 1308 aa10.77□□□□□ -0.69
RIF1-211ENST00000494333 COL3A1P02461 1466 aaPredicted RBP10.76□□□□□ -0.69
RIF1-211ENST00000494333 TTLL8A6PVC2 850 aa10.76□□□□□ -0.69
RIF1-211ENST00000494333 ATG7O95352 703 aa10.76□□□□□ -0.69
RIF1-211ENST00000494333 RNF144AP50876 292 aaPredicted RBP10.76□□□□□ -0.69
RIF1-211ENST00000494333 CENPCQ03188 943 aa10.76□□□□□ -0.69
RIF1-211ENST00000494333 ANKMY2Q8IV38 441 aa10.76□□□□□ -0.69
RIF1-211ENST00000494333 DNAJC10Q8IXB1 793 aa10.76□□□□□ -0.69
RIF1-211ENST00000494333 NLGN1Q8N2Q7 840 aa10.76□□□□□ -0.69
RIF1-211ENST00000494333 IL17REQ8NFR9 667 aa10.76□□□□□ -0.69
RIF1-211ENST00000494333 TRIM47Q96LD4 638 aa10.76□□□□□ -0.69
RIF1-211ENST00000494333 TAF1LQ8IZX4 1826 aa10.75□□□□□ -0.69
RIF1-211ENST00000494333 TUBGCP6Q96RT7 1819 aa10.75□□□□□ -0.69
RIF1-211ENST00000494333 FIGNL2A6NMB9 653 aa10.75□□□□□ -0.69
RIF1-211ENST00000494333 SFI1A8K8P3 1242 aa10.75□□□□□ -0.69
RIF1-211ENST00000494333 MMP10P09238 476 aa10.75□□□□□ -0.69
RIF1-211ENST00000494333 TEFQ10587 303 aa10.75□□□□□ -0.69
RIF1-211ENST00000494333 DPYDQ12882 1025 aa10.75□□□□□ -0.69
RIF1-211ENST00000494333 RNF217Q8TC41 542 aa10.75□□□□□ -0.69
RIF1-211ENST00000494333 KIFC2Q96AC6 838 aa10.75□□□□□ -0.69
RIF1-211ENST00000494333 NOVA2Q9UNW9 492 aaKnown RBP10.75□□□□□ -0.69
RIF1-211ENST00000494333 RBM19Q9Y4C8 960 aaKnown RBP10.75□□□□□ -0.69
RIF1-211ENST00000494333 GYS1P13807 737 aa10.74□□□□□ -0.69
RIF1-211ENST00000494333 GPC1P35052 558 aa10.74□□□□□ -0.69
RIF1-211ENST00000494333 SEC13P55735 322 aa10.74□□□□□ -0.69
RIF1-211ENST00000494333 INTS5Q6P9B9 1019 aaKnown RBP10.74□□□□□ -0.69
RIF1-211ENST00000494333 TTC5Q8N0Z6 440 aa10.74□□□□□ -0.69
RIF1-211ENST00000494333 BACH1O14867 736 aa10.73□□□□□ -0.69
RIF1-211ENST00000494333 GRIN3BO60391 1043 aa10.73□□□□□ -0.69
RIF1-211ENST00000494333 CYP19A1P11511 503 aaPredicted RBP10.73□□□□□ -0.69
RIF1-211ENST00000494333 SNRPBP14678 240 aaKnown RBP10.73□□□□□ -0.69
RIF1-211ENST00000494333 YBX3P16989 372 aaKnown RBP eCLIP10.73□□□□□ -0.69
RIF1-211ENST00000494333 DDX10Q13206 875 aaKnown RBP10.73□□□□□ -0.69
RIF1-211ENST00000494333 ELOAQ14241 798 aaKnown RBP10.73□□□□□ -0.69
RIF1-211ENST00000494333 GRIP2Q9C0E4 1043 aa10.73□□□□□ -0.69
RIF1-211ENST00000494333 CCDC87Q9NVE4 849 aa10.73□□□□□ -0.69
RIF1-211ENST00000494333 DNMT3LQ9UJW3 386 aa10.73□□□□□ -0.69
RIF1-211ENST00000494333 ZMIZ1Q9ULJ6 1067 aa10.73□□□□□ -0.69
RIF1-211ENST00000494333 SOBPA7XYQ1 873 aa10.72□□□□□ -0.69
RIF1-211ENST00000494333 SMTNP53814 917 aa10.72□□□□□ -0.69
RIF1-211ENST00000494333 TLR1Q15399 786 aa10.72□□□□□ -0.69
RIF1-211ENST00000494333 ZNF790Q6PG37 636 aa10.72□□□□□ -0.69
RIF1-211ENST00000494333 FAM200AQ8TCP9 573 aa10.72□□□□□ -0.69
RIF1-211ENST00000494333 RTF1Q92541 710 aaKnown RBP10.72□□□□□ -0.69
RIF1-211ENST00000494333 ZNF496Q96IT1 587 aaPredicted RBP10.72□□□□□ -0.69
RIF1-211ENST00000494333 SRP68Q9UHB9 627 aaKnown RBP10.72□□□□□ -0.69
RIF1-211ENST00000494333 WWC3Q9ULE0 1092 aa10.72□□□□□ -0.69
RIF1-211ENST00000494333 COL24A1Q17RW2 1714 aa10.72□□□□□ -0.69
RIF1-211ENST00000494333 BTBD11A6QL63 1104 aa10.71□□□□□ -0.69
RIF1-211ENST00000494333 MAN1A2O60476 641 aa10.71□□□□□ -0.69
RIF1-211ENST00000494333 UBR3Q6ZT12 1888 aa10.71□□□□□ -0.69
RIF1-211ENST00000494333 TNS4Q8IZW8 715 aa10.71□□□□□ -0.69
RIF1-211ENST00000494333 TSEN2Q8NCE0 465 aaKnown RBP10.71□□□□□ -0.69
RIF1-211ENST00000494333 PARP3Q9Y6F1 533 aa10.71□□□□□ -0.69
RIF1-211ENST00000494333 USP42Q9H9J4 1324 aaKnown RBP10.7□□□□□ -0.7
RIF1-211ENST00000494333 M0R2N6 131 aa10.7□□□□□ -0.7
RIF1-211ENST00000494333 STARD3NLO95772 234 aa10.7□□□□□ -0.7
RIF1-211ENST00000494333 NEFMP07197 916 aa10.7□□□□□ -0.7
RIF1-211ENST00000494333 CANXP27824 592 aaKnown RBP10.7□□□□□ -0.7
RIF1-211ENST00000494333 DCTN1Q14203 1278 aa10.7□□□□□ -0.7
RIF1-211ENST00000494333 MTFR1Q15390 333 aa10.7□□□□□ -0.7
RIF1-211ENST00000494333 MCM10Q7L590 875 aa10.7□□□□□ -0.7
RIF1-211ENST00000494333 STK32AQ8WU08 396 aa10.7□□□□□ -0.7
RIF1-211ENST00000494333 ZSCAN10Q96SZ4 725 aaPredicted RBP10.7□□□□□ -0.7
RIF1-211ENST00000494333 TEX13AQ9BXU3 409 aaPredicted RBP10.7□□□□□ -0.7
RIF1-211ENST00000494333 ZBTB1Q9Y2K1 713 aa10.7□□□□□ -0.7
RIF1-211ENST00000494333 SCN11AQ9UI33 1791 aa10.7□□□□□ -0.7
RIF1-211ENST00000494333 MRC1P22897 1456 aa10.69□□□□□ -0.7
RIF1-211ENST00000494333 CEMIPQ8WUJ3 1361 aa10.69□□□□□ -0.7
RIF1-211ENST00000494333 SOS1Q07889 1333 aaPredicted RBP10.69□□□□□ -0.7
RIF1-211ENST00000494333 A6NJY4 79 aa10.69□□□□□ -0.7
RIF1-211ENST00000494333 KCNQ3O43525 872 aa10.69□□□□□ -0.7
RIF1-211ENST00000494333 EPHA4P54764 986 aa10.69□□□□□ -0.7
RIF1-211ENST00000494333 TGFB2P61812 414 aa10.69□□□□□ -0.7
RIF1-211ENST00000494333 RALBP1Q15311 655 aa10.69□□□□□ -0.7
RIF1-211ENST00000494333 USPL1Q5W0Q7 1092 aa10.69□□□□□ -0.7
RIF1-211ENST00000494333 LYSMD3Q7Z3D4 306 aa10.69□□□□□ -0.7
RIF1-211ENST00000494333 PRICKLE2Q7Z3G6 844 aa10.69□□□□□ -0.7
RIF1-211ENST00000494333 FMNL2Q96PY5 1086 aa10.69□□□□□ -0.7
RIF1-211ENST00000494333 ZNF831Q5JPB2 1677 aa10.69□□□□□ -0.7
RIF1-211ENST00000494333 HEG1Q9ULI3 1381 aa10.68□□□□□ -0.7
RIF1-211ENST00000494333 A0A0G2JLW4 131 aa10.68□□□□□ -0.7
RIF1-211ENST00000494333 HTATSF1O43719 755 aaKnown RBP10.68□□□□□ -0.7
RIF1-211ENST00000494333 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.68□□□□□ -0.7
RIF1-211ENST00000494333 ZNF787Q6DD87 383 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms