RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 PLCH1Q4KWH8 1693 aa7.49□□□□□ -1.21
PTCD3-219ENST00000494323 TRIM37O94972 964 aa7.49□□□□□ -1.21
PTCD3-219ENST00000494323 EZH2Q15910 746 aaKnown RBP7.49□□□□□ -1.21
PTCD3-219ENST00000494323 ALKBH2Q6NS38 261 aa7.49□□□□□ -1.21
PTCD3-219ENST00000494323 NEUROD4Q9HD90 331 aa7.49□□□□□ -1.21
PTCD3-219ENST00000494323 KLK14Q9P0G3 267 aa7.49□□□□□ -1.21
PTCD3-219ENST00000494323 KNDC1Q76NI1 1749 aa7.49□□□□□ -1.21
PTCD3-219ENST00000494323 BCRP11274 1271 aa7.48□□□□□ -1.21
PTCD3-219ENST00000494323 MPSTP25325 297 aa7.48□□□□□ -1.21
PTCD3-219ENST00000494323 EVA1CP58658 441 aa7.48□□□□□ -1.21
PTCD3-219ENST00000494323 UBAP2LQ14157 1087 aaKnown RBP7.48□□□□□ -1.21
PTCD3-219ENST00000494323 IER5Q5VY09 327 aa7.48□□□□□ -1.21
PTCD3-219ENST00000494323 FIGNL1Q6PIW4 674 aa7.48□□□□□ -1.21
PTCD3-219ENST00000494323 ACDQ96AP0 544 aa7.48□□□□□ -1.21
PTCD3-219ENST00000494323 NUDT16Q96DE0 195 aaKnown RBP7.48□□□□□ -1.21
PTCD3-219ENST00000494323 IFT43Q96FT9 208 aa7.48□□□□□ -1.21
PTCD3-219ENST00000494323 SCARF2Q96GP6 870 aaPredicted RBP7.48□□□□□ -1.21
PTCD3-219ENST00000494323 ZIC5Q96T25 663 aa7.48□□□□□ -1.21
PTCD3-219ENST00000494323 CDK19Q9BWU1 502 aa7.48□□□□□ -1.21
PTCD3-219ENST00000494323 ATXN7L1Q9ULK2 861 aaPredicted RBP7.48□□□□□ -1.21
PTCD3-219ENST00000494323 NWD2Q9ULI1 1742 aa7.47□□□□□ -1.21
PTCD3-219ENST00000494323 A0A1W2PNR3 127 aa7.47□□□□□ -1.21
PTCD3-219ENST00000494323 TGFBR3LH3BV60 316 aa7.47□□□□□ -1.21
PTCD3-219ENST00000494323 APBA3O96018 575 aa7.47□□□□□ -1.21
PTCD3-219ENST00000494323 NEDD1Q8NHV4 660 aa7.47□□□□□ -1.21
PTCD3-219ENST00000494323 ABHD17AQ96GS6 310 aa7.47□□□□□ -1.21
PTCD3-219ENST00000494323 SUSD3Q96L08 255 aa7.47□□□□□ -1.21
PTCD3-219ENST00000494323 CAMKK2Q96RR4 588 aa7.47□□□□□ -1.21
PTCD3-219ENST00000494323 GJA3Q9Y6H8 435 aa7.47□□□□□ -1.21
PTCD3-219ENST00000494323 ANKARQ7Z5J8 1434 aa7.46□□□□□ -1.21
PTCD3-219ENST00000494323 ARHGAP4P98171 946 aa7.46□□□□□ -1.22
PTCD3-219ENST00000494323 RASSF7Q02833 373 aa7.46□□□□□ -1.22
PTCD3-219ENST00000494323 PDE3BQ13370 1112 aa7.46□□□□□ -1.22
PTCD3-219ENST00000494323 ECM1Q16610 540 aa7.46□□□□□ -1.22
PTCD3-219ENST00000494323 NBPF8Q3BBV2 869 aa7.46□□□□□ -1.22
PTCD3-219ENST00000494323 FAM196AQ6ZSG2 479 aa7.46□□□□□ -1.22
PTCD3-219ENST00000494323 NLRP8Q86W28 1048 aa7.46□□□□□ -1.22
PTCD3-219ENST00000494323 OXCT2Q9BYC2 517 aaPredicted RBP7.46□□□□□ -1.22
PTCD3-219ENST00000494323 SPATA31A1Q5TZJ5 1347 aa7.46□□□□□ -1.22
PTCD3-219ENST00000494323 KIAA0232Q92628 1395 aa7.46□□□□□ -1.22
PTCD3-219ENST00000494323 RAB3GAP2Q9H2M9 1393 aa7.46□□□□□ -1.22
PTCD3-219ENST00000494323 BNIP3LO60238 219 aa7.45□□□□□ -1.22
PTCD3-219ENST00000494323 GDF11O95390 407 aa7.45□□□□□ -1.22
PTCD3-219ENST00000494323 BMP4P12644 408 aa7.45□□□□□ -1.22
PTCD3-219ENST00000494323 FGFR3P22607 806 aa7.45□□□□□ -1.22
PTCD3-219ENST00000494323 EIF1AXP47813 144 aaKnown RBP7.45□□□□□ -1.22
PTCD3-219ENST00000494323 RBM25P49756 843 aaKnown RBP7.45□□□□□ -1.22
PTCD3-219ENST00000494323 GSK3AP49840 483 aa7.45□□□□□ -1.22
PTCD3-219ENST00000494323 ETFBKMTQ8IXQ9 262 aa7.45□□□□□ -1.22
PTCD3-219ENST00000494323 TMEM151AQ8N4L1 468 aa7.45□□□□□ -1.22
PTCD3-219ENST00000494323 LRRC4BQ9NT99 713 aa7.45□□□□□ -1.22
PTCD3-219ENST00000494323 FAM13BQ9NYF5 915 aa7.45□□□□□ -1.22
PTCD3-219ENST00000494323 BCS1LQ9Y276 419 aa7.45□□□□□ -1.22
PTCD3-219ENST00000494323 ACEP12821 1306 aa7.45□□□□□ -1.22
PTCD3-219ENST00000494323 ABCA3Q99758 1704 aa7.44□□□□□ -1.22
PTCD3-219ENST00000494323 TRPM3Q9HCF6 1732 aaPredicted RBP7.44□□□□□ -1.22
PTCD3-219ENST00000494323 DLC1Q96QB1 1528 aa7.44□□□□□ -1.22
PTCD3-219ENST00000494323 OIP5O43482 229 aa7.44□□□□□ -1.22
PTCD3-219ENST00000494323 MICAL2O94851 1124 aa7.44□□□□□ -1.22
PTCD3-219ENST00000494323 IRS1P35568 1242 aa7.44□□□□□ -1.22
PTCD3-219ENST00000494323 AAMPQ13685 434 aa7.44□□□□□ -1.22
PTCD3-219ENST00000494323 SUZ12Q15022 739 aaKnown RBP7.44□□□□□ -1.22
PTCD3-219ENST00000494323 SAMD5Q5TGI4 173 aa7.44□□□□□ -1.22
PTCD3-219ENST00000494323 LRRC69Q6ZNQ3 347 aa7.44□□□□□ -1.22
PTCD3-219ENST00000494323 TREML1Q86YW5 311 aa7.44□□□□□ -1.22
PTCD3-219ENST00000494323 ZNF280CQ8ND82 737 aa7.44□□□□□ -1.22
PTCD3-219ENST00000494323 KLRG1Q96E93 195 aa7.44□□□□□ -1.22
PTCD3-219ENST00000494323 HSH2DQ96JZ2 352 aa7.44□□□□□ -1.22
PTCD3-219ENST00000494323 ZCCHC2Q9C0B9 1178 aaKnown RBP7.44□□□□□ -1.22
PTCD3-219ENST00000494323 NDFIP2Q9NV92 336 aa7.44□□□□□ -1.22
PTCD3-219ENST00000494323 GDF2Q9UK05 429 aaPredicted RBP7.44□□□□□ -1.22
PTCD3-219ENST00000494323 PCDHGC4Q9Y5F7 938 aa7.44□□□□□ -1.22
PTCD3-219ENST00000494323 ADGRB1O14514 1584 aa7.44□□□□□ -1.22
PTCD3-219ENST00000494323 COL14A1Q05707 1796 aaKnown RBP7.43□□□□□ -1.22
PTCD3-219ENST00000494323 ZBTB39O15060 712 aa7.43□□□□□ -1.22
PTCD3-219ENST00000494323 ATXN7O15265 892 aaPredicted RBP7.43□□□□□ -1.22
PTCD3-219ENST00000494323 NDUFB5O43674 189 aa7.43□□□□□ -1.22
PTCD3-219ENST00000494323 ZAP70P43403 619 aa7.43□□□□□ -1.22
PTCD3-219ENST00000494323 FAM26DQ5JW98 314 aa7.43□□□□□ -1.22
PTCD3-219ENST00000494323 KANK3Q6NY19 840 aa7.43□□□□□ -1.22
PTCD3-219ENST00000494323 PODNQ7Z5L7 613 aa7.43□□□□□ -1.22
PTCD3-219ENST00000494323 BTLAQ7Z6A9 289 aa7.43□□□□□ -1.22
PTCD3-219ENST00000494323 GOLGA6L1Q8N7Z2 621 aa7.43□□□□□ -1.22
PTCD3-219ENST00000494323 DCTN4Q9UJW0 460 aa7.43□□□□□ -1.22
PTCD3-219ENST00000494323 BRPF3Q9ULD4 1205 aa7.43□□□□□ -1.22
PTCD3-219ENST00000494323 ALS2Q96Q42 1657 aa7.43□□□□□ -1.22
PTCD3-219ENST00000494323 NRAPQ86VF7 1730 aa7.43□□□□□ -1.22
PTCD3-219ENST00000494323 EIF3AQ14152 1382 aaKnown RBP7.43□□□□□ -1.22
PTCD3-219ENST00000494323 DCDC2BA2VCK2 349 aa7.42□□□□□ -1.22
PTCD3-219ENST00000494323 GCP02774 474 aa7.42□□□□□ -1.22
PTCD3-219ENST00000494323 TCP11L2Q8N4U5 519 aa7.42□□□□□ -1.22
PTCD3-219ENST00000494323 CITED4Q96RK1 184 aa7.42□□□□□ -1.22
PTCD3-219ENST00000494323 DMGDHQ9UI17 866 aaKnown RBP7.42□□□□□ -1.22
PTCD3-219ENST00000494323 TULP4Q9NRJ4 1543 aa7.42□□□□□ -1.22
PTCD3-219ENST00000494323 PHF20L1A8MW92 1017 aa7.41□□□□□ -1.22
PTCD3-219ENST00000494323 FZD6O60353 706 aa7.41□□□□□ -1.22
PTCD3-219ENST00000494323 PCSK2P16519 638 aa7.41□□□□□ -1.22
PTCD3-219ENST00000494323 ERCC3P19447 782 aa7.41□□□□□ -1.22
PTCD3-219ENST00000494323 MAPK1P28482 360 aa7.41□□□□□ -1.22
PTCD3-219ENST00000494323 MZF1P28698 734 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms