RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 BCL11BQ9C0K0 894 aaPredicted RBP12.7□□□□□ -0.38
PHACTR4-204ENST00000493669 ANKRD2Q9GZV1 360 aa12.7□□□□□ -0.38
PHACTR4-204ENST00000493669 C4AP0C0L4 1744 aa12.7□□□□□ -0.38
PHACTR4-204ENST00000493669 SYCE3A1L190 88 aa12.7□□□□□ -0.38
PHACTR4-204ENST00000493669 H3BQV1 296 aa12.7□□□□□ -0.38
PHACTR4-204ENST00000493669 CTDNEP1O95476 244 aa12.7□□□□□ -0.38
PHACTR4-204ENST00000493669 IFFO2Q5TF58 517 aa12.7□□□□□ -0.38
PHACTR4-204ENST00000493669 BICDL1Q6ZP65 573 aa12.7□□□□□ -0.38
PHACTR4-204ENST00000493669 SNAP23O00161 211 aa12.69□□□□□ -0.38
PHACTR4-204ENST00000493669 MBD4O95243 580 aa12.69□□□□□ -0.38
PHACTR4-204ENST00000493669 APPP05067 770 aa12.69□□□□□ -0.38
PHACTR4-204ENST00000493669 HMGB2P26583 209 aaKnown RBP12.69□□□□□ -0.38
PHACTR4-204ENST00000493669 RESTQ13127 1097 aa12.69□□□□□ -0.38
PHACTR4-204ENST00000493669 ARHGEF1Q92888 912 aaKnown RBP12.69□□□□□ -0.38
PHACTR4-204ENST00000493669 NACAP1Q9BZK3 213 aa12.69□□□□□ -0.38
PHACTR4-204ENST00000493669 NBPF3Q9H094 633 aa12.69□□□□□ -0.38
PHACTR4-204ENST00000493669 SRP68Q9UHB9 627 aaKnown RBP12.69□□□□□ -0.38
PHACTR4-204ENST00000493669 DENND2AQ9ULE3 1009 aa12.69□□□□□ -0.38
PHACTR4-204ENST00000493669 ANTXR2P58335 489 aa12.69□□□□□ -0.38
PHACTR4-204ENST00000493669 RPS8P62241 208 aaKnown RBP12.69□□□□□ -0.38
PHACTR4-204ENST00000493669 CCDC173Q0VFZ6 552 aa12.69□□□□□ -0.38
PHACTR4-204ENST00000493669 ATL3Q6DD88 541 aa12.69□□□□□ -0.38
PHACTR4-204ENST00000493669 TMEM87BQ96K49 555 aa12.69□□□□□ -0.38
PHACTR4-204ENST00000493669 IGSF3O75054 1194 aa12.68□□□□□ -0.38
PHACTR4-204ENST00000493669 SEPT12Q8IYM1 358 aa12.68□□□□□ -0.38
PHACTR4-204ENST00000493669 NAPBQ9H115 298 aa12.68□□□□□ -0.38
PHACTR4-204ENST00000493669 CNNM2Q9H8M5 875 aa12.68□□□□□ -0.38
PHACTR4-204ENST00000493669 LRP2BPQ9P2M1 347 aa12.68□□□□□ -0.38
PHACTR4-204ENST00000493669 TRAPPC3LQ5T215 181 aa12.68□□□□□ -0.38
PHACTR4-204ENST00000493669 TBC1D10CQ8IV04 446 aa12.68□□□□□ -0.38
PHACTR4-204ENST00000493669 IFNL3Q8IZI9 196 aa12.68□□□□□ -0.38
PHACTR4-204ENST00000493669 CELF1Q92879 486 aaKnown RBP12.68□□□□□ -0.38
PHACTR4-204ENST00000493669 HSPA1LP34931 641 aa12.68□□□□□ -0.38
PHACTR4-204ENST00000493669 RFC4P35249 363 aa12.68□□□□□ -0.38
PHACTR4-204ENST00000493669 CHST3Q7LGC8 479 aa12.68□□□□□ -0.38
PHACTR4-204ENST00000493669 FERMT3Q86UX7 667 aa12.68□□□□□ -0.38
PHACTR4-204ENST00000493669 DDX11Q96FC9 970 aa12.68□□□□□ -0.38
PHACTR4-204ENST00000493669 PPP1R9BQ96SB3 815 aa12.68□□□□□ -0.38
PHACTR4-204ENST00000493669 MTA3Q9BTC8 594 aa12.68□□□□□ -0.38
PHACTR4-204ENST00000493669 TSPY26PQ9H489 355 aa12.68□□□□□ -0.38
PHACTR4-204ENST00000493669 ANGEL1Q9UNK9 670 aaKnown RBP12.68□□□□□ -0.38
PHACTR4-204ENST00000493669 KLF18A0A0U1RQI7 1052 aa12.67□□□□□ -0.38
PHACTR4-204ENST00000493669 FAM43AQ8N2R8 423 aa12.67□□□□□ -0.38
PHACTR4-204ENST00000493669 RBSNQ9H1K0 784 aa12.67□□□□□ -0.38
PHACTR4-204ENST00000493669 CFAP45Q9UL16 551 aa12.67□□□□□ -0.38
PHACTR4-204ENST00000493669 CCT2P78371 535 aaKnown RBP12.67□□□□□ -0.38
PHACTR4-204ENST00000493669 FBXO33Q7Z6M2 555 aa12.67□□□□□ -0.38
PHACTR4-204ENST00000493669 TTC6Q86TZ1 520 aa12.67□□□□□ -0.38
PHACTR4-204ENST00000493669 KRT23Q9C075 422 aa12.67□□□□□ -0.38
PHACTR4-204ENST00000493669 EPB41L4AQ9HCS5 686 aaPredicted RBP12.67□□□□□ -0.38
PHACTR4-204ENST00000493669 GOLGA8BA8MQT2 603 aa12.66□□□□□ -0.38
PHACTR4-204ENST00000493669 GSG1L2A8MUP6 293 aa12.66□□□□□ -0.38
PHACTR4-204ENST00000493669 SH2B2O14492 632 aaPredicted RBP12.66□□□□□ -0.38
PHACTR4-204ENST00000493669 VPS37DQ86XT2 251 aa12.66□□□□□ -0.38
PHACTR4-204ENST00000493669 ARMT1Q9H993 441 aa12.66□□□□□ -0.38
PHACTR4-204ENST00000493669 NAP1L2Q9ULW6 460 aaPredicted RBP12.66□□□□□ -0.38
PHACTR4-204ENST00000493669 DTNBO60941 627 aa12.66□□□□□ -0.38
PHACTR4-204ENST00000493669 GYG1P46976 350 aa12.66□□□□□ -0.38
PHACTR4-204ENST00000493669 SLC27A3Q5K4L6 730 aa12.66□□□□□ -0.38
PHACTR4-204ENST00000493669 FAM84BQ96KN1 310 aaPredicted RBP12.66□□□□□ -0.38
PHACTR4-204ENST00000493669 SPATA32Q96LK8 384 aa12.66□□□□□ -0.38
PHACTR4-204ENST00000493669 NCOA5Q9HCD5 579 aaKnown RBP12.66□□□□□ -0.38
PHACTR4-204ENST00000493669 HPS5Q9UPZ3 1129 aa12.66□□□□□ -0.38
PHACTR4-204ENST00000493669 CHD4Q14839 1912 aa12.66□□□□□ -0.38
PHACTR4-204ENST00000493669 COL1A1P02452 1464 aaPredicted RBP12.66□□□□□ -0.38
PHACTR4-204ENST00000493669 MYH15Q9Y2K3 1946 aa12.65□□□□□ -0.38
PHACTR4-204ENST00000493669 FAM182BQ5T319 152 aa12.65□□□□□ -0.38
PHACTR4-204ENST00000493669 SGMS1Q86VZ5 419 aa12.65□□□□□ -0.38
PHACTR4-204ENST00000493669 STAG1Q8WVM7 1258 aa12.65□□□□□ -0.38
PHACTR4-204ENST00000493669 AKNAD1Q5T1N1 836 aa12.65□□□□□ -0.38
PHACTR4-204ENST00000493669 LEO1Q8WVC0 666 aaPredicted RBP12.65□□□□□ -0.38
PHACTR4-204ENST00000493669 RNF41Q9H4P4 317 aaPredicted RBP12.65□□□□□ -0.38
PHACTR4-204ENST00000493669 SLC4A4Q9Y6R1 1079 aa12.65□□□□□ -0.38
PHACTR4-204ENST00000493669 TAF1P21675 1872 aa12.65□□□□□ -0.38
PHACTR4-204ENST00000493669 CDKL5O76039 1030 aa12.65□□□□□ -0.38
PHACTR4-204ENST00000493669 CYP7A1P22680 504 aa12.65□□□□□ -0.38
PHACTR4-204ENST00000493669 TM4SF1P30408 202 aa12.65□□□□□ -0.38
PHACTR4-204ENST00000493669 LIFRP42702 1097 aa12.65□□□□□ -0.38
PHACTR4-204ENST00000493669 FAM196AQ6ZSG2 479 aa12.65□□□□□ -0.38
PHACTR4-204ENST00000493669 LCORLQ8N3X6 602 aa12.65□□□□□ -0.38
PHACTR4-204ENST00000493669 CACNA1SQ13698 1873 aa12.65□□□□□ -0.39
PHACTR4-204ENST00000493669 CPLX1O14810 134 aa12.64□□□□□ -0.39
PHACTR4-204ENST00000493669 TDO2P48775 406 aa12.64□□□□□ -0.39
PHACTR4-204ENST00000493669 CYB5R4Q7L1T6 521 aa12.64□□□□□ -0.39
PHACTR4-204ENST00000493669 AMIGO3Q86WK7 504 aa12.64□□□□□ -0.39
PHACTR4-204ENST00000493669 ZNF396Q96N95 335 aaPredicted RBP12.64□□□□□ -0.39
PHACTR4-204ENST00000493669 GPHNQ9NQX3 736 aaPredicted RBP12.64□□□□□ -0.39
PHACTR4-204ENST00000493669 RAI14Q9P0K7 980 aa12.64□□□□□ -0.39
PHACTR4-204ENST00000493669 NID2Q14112 1375 aa12.64□□□□□ -0.39
PHACTR4-204ENST00000493669 TNRC6CQ9HCJ0 1690 aaKnown RBP12.64□□□□□ -0.39
PHACTR4-204ENST00000493669 MAST2Q6P0Q8 1798 aa12.64□□□□□ -0.39
PHACTR4-204ENST00000493669 NEDD4P46934 1319 aa12.64□□□□□ -0.39
PHACTR4-204ENST00000493669 UBR3Q6ZT12 1888 aa12.64□□□□□ -0.39
PHACTR4-204ENST00000493669 MAGEB6P1A0A0J9YX57 407 aa12.64□□□□□ -0.39
PHACTR4-204ENST00000493669 CPLX2Q6PUV4 134 aaKnown RBP12.64□□□□□ -0.39
PHACTR4-204ENST00000493669 SMIM5Q71RC9 77 aa12.64□□□□□ -0.39
PHACTR4-204ENST00000493669 ANAPC4Q9UJX5 808 aa12.64□□□□□ -0.39
PHACTR4-204ENST00000493669 GOLGA6L4A6NEF3 574 aa12.63□□□□□ -0.39
PHACTR4-204ENST00000493669 B4E1Z4 1266 aa12.63□□□□□ -0.39
PHACTR4-204ENST00000493669 FDPSP14324 419 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms