RNA–Protein interactions for RNA: ENST00000493109.2

COL12A1-209, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-209ENST00000493109 METTL22Q9BUU2 404 aaPredicted RBP10.33□□□□□ -0.76
COL12A1-209ENST00000493109 ACTL7BQ9Y614 415 aa10.33□□□□□ -0.76
COL12A1-209ENST00000493109 CYP26A1O43174 497 aa10.32□□□□□ -0.76
COL12A1-209ENST00000493109 FBXL18Q96ME1 805 aa10.32□□□□□ -0.76
COL12A1-209ENST00000493109 FZD6O60353 706 aa10.31□□□□□ -0.76
COL12A1-209ENST00000493109 WFDC3Q8IUB2 231 aa10.31□□□□□ -0.76
COL12A1-209ENST00000493109 PAK6Q9NQU5 681 aaPredicted RBP10.31□□□□□ -0.76
COL12A1-209ENST00000493109 BSDC1Q9NW68 430 aaPredicted RBP10.31□□□□□ -0.76
COL12A1-209ENST00000493109 ZNF423Q2M1K9 1284 aa10.3□□□□□ -0.76
COL12A1-209ENST00000493109 TP53INP2Q8IXH6 220 aa10.3□□□□□ -0.76
COL12A1-209ENST00000493109 TTC16Q8NEE8 873 aa10.3□□□□□ -0.76
COL12A1-209ENST00000493109 ZC3H7BQ9UGR2 993 aaKnown RBP10.3□□□□□ -0.76
COL12A1-209ENST00000493109 TMEM88BA6NKF7 163 aa10.29□□□□□ -0.76
COL12A1-209ENST00000493109 POLR3DP05423 398 aaPredicted RBP10.29□□□□□ -0.76
COL12A1-209ENST00000493109 SSFA2P28290 1259 aa10.29□□□□□ -0.76
COL12A1-209ENST00000493109 AMOTL2Q9Y2J4 779 aa10.29□□□□□ -0.76
COL12A1-209ENST00000493109 ECEL1O95672 775 aa10.28□□□□□ -0.76
COL12A1-209ENST00000493109 NFICP08651 508 aa10.28□□□□□ -0.76
COL12A1-209ENST00000493109 ALKBH2Q6NS38 261 aa10.28□□□□□ -0.76
COL12A1-209ENST00000493109 GJD3Q8N144 294 aa10.28□□□□□ -0.76
COL12A1-209ENST00000493109 SEMA6CQ9H3T2 930 aa10.28□□□□□ -0.76
COL12A1-209ENST00000493109 ZFYVE28Q9HCC9 887 aa10.28□□□□□ -0.76
COL12A1-209ENST00000493109 C8AP07357 584 aa10.27□□□□□ -0.77
COL12A1-209ENST00000493109 MAOBP27338 520 aa10.27□□□□□ -0.77
COL12A1-209ENST00000493109 GRIA4P48058 902 aa10.27□□□□□ -0.77
COL12A1-209ENST00000493109 PCDH1Q08174 1060 aa10.27□□□□□ -0.77
COL12A1-209ENST00000493109 SPRED3Q2MJR0 410 aa10.27□□□□□ -0.77
COL12A1-209ENST00000493109 SEZ6L2Q6UXD5 910 aa10.27□□□□□ -0.77
COL12A1-209ENST00000493109 ZNF765Q7L2R6 523 aa10.27□□□□□ -0.77
COL12A1-209ENST00000493109 POU5F2Q8N7G0 328 aa10.27□□□□□ -0.77
COL12A1-209ENST00000493109 TCF12Q99081 682 aa10.27□□□□□ -0.77
COL12A1-209ENST00000493109 ACSS3Q9H6R3 686 aa10.27□□□□□ -0.77
COL12A1-209ENST00000493109 FAM105AQ9NUU6 356 aa10.27□□□□□ -0.77
COL12A1-209ENST00000493109 CCDC87Q9NVE4 849 aa10.27□□□□□ -0.77
COL12A1-209ENST00000493109 RAB6AP20340 208 aa10.26□□□□□ -0.77
COL12A1-209ENST00000493109 CCNJLQ8IV13 435 aa10.26□□□□□ -0.77
COL12A1-209ENST00000493109 FLCNQ8NFG4 579 aa10.26□□□□□ -0.77
COL12A1-209ENST00000493109 TRIM56Q9BRZ2 755 aaKnown RBP10.26□□□□□ -0.77
COL12A1-209ENST00000493109 A0A096LPE4 126 aa10.25□□□□□ -0.77
COL12A1-209ENST00000493109 A0A1W2PP55 124 aa10.25□□□□□ -0.77
COL12A1-209ENST00000493109 A0A1W2PPZ6 126 aa10.25□□□□□ -0.77
COL12A1-209ENST00000493109 DYNC1LI2O43237 492 aaPredicted RBP10.25□□□□□ -0.77
COL12A1-209ENST00000493109 EHHADHQ08426 723 aa10.25□□□□□ -0.77
COL12A1-209ENST00000493109 GSX1Q9H4S2 264 aaPredicted RBP10.25□□□□□ -0.77
COL12A1-209ENST00000493109 C1GALT1Q9NS00 363 aa10.25□□□□□ -0.77
COL12A1-209ENST00000493109 PHLDB3Q6NSJ2 640 aa10.24□□□□□ -0.77
COL12A1-209ENST00000493109 YIPF2Q9BWQ6 316 aa10.24□□□□□ -0.77
COL12A1-209ENST00000493109 CLEC4MQ9H2X3 399 aaPredicted RBP10.24□□□□□ -0.77
COL12A1-209ENST00000493109 LRRC4CQ9HCJ2 640 aa10.24□□□□□ -0.77
COL12A1-209ENST00000493109 PAPLNO95428 1278 aa10.23□□□□□ -0.77
COL12A1-209ENST00000493109 ZNF574Q6ZN55 896 aaPredicted RBP10.23□□□□□ -0.77
COL12A1-209ENST00000493109 ASIC4Q96FT7 647 aa10.23□□□□□ -0.77
COL12A1-209ENST00000493109 JUNBP17275 347 aaPredicted RBP10.22□□□□□ -0.77
COL12A1-209ENST00000493109 USP5P45974 858 aa10.22□□□□□ -0.77
COL12A1-209ENST00000493109 AAMPQ13685 434 aa10.22□□□□□ -0.77
COL12A1-209ENST00000493109 POU4F3Q15319 338 aa10.22□□□□□ -0.77
COL12A1-209ENST00000493109 CCDC97Q96F63 343 aaPredicted RBP10.22□□□□□ -0.77
COL12A1-209ENST00000493109 MAP7Q14244 749 aa10.21□□□□□ -0.77
COL12A1-209ENST00000493109 AKAP4Q5JQC9 854 aa10.21□□□□□ -0.77
COL12A1-209ENST00000493109 DYMQ7RTS9 669 aa10.21□□□□□ -0.77
COL12A1-209ENST00000493109 GALNT12Q8IXK2 581 aa10.21□□□□□ -0.77
COL12A1-209ENST00000493109 AGBL5Q8NDL9 886 aa10.21□□□□□ -0.77
COL12A1-209ENST00000493109 BCL7CQ8WUZ0 217 aaPredicted RBP10.21□□□□□ -0.77
COL12A1-209ENST00000493109 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.2□□□□□ -0.78
COL12A1-209ENST00000493109 FAM13AO94988 1023 aa10.2□□□□□ -0.78
COL12A1-209ENST00000493109 LIN7BQ9HAP6 207 aa10.2□□□□□ -0.78
COL12A1-209ENST00000493109 SERPINA10Q9UK55 444 aa10.2□□□□□ -0.78
COL12A1-209ENST00000493109 DUSP27Q5VZP5 1158 aa10.19□□□□□ -0.78
COL12A1-209ENST00000493109 USPL1Q5W0Q7 1092 aa10.19□□□□□ -0.78
COL12A1-209ENST00000493109 SPRED2Q7Z698 418 aa10.19□□□□□ -0.78
COL12A1-209ENST00000493109 ANO2Q9NQ90 1003 aa10.19□□□□□ -0.78
COL12A1-209ENST00000493109 AP4E1Q9UPM8 1137 aa10.19□□□□□ -0.78
COL12A1-209ENST00000493109 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.19□□□□□ -0.78
COL12A1-209ENST00000493109 CARNS1A5YM72 827 aa10.18□□□□□ -0.78
COL12A1-209ENST00000493109 B3GALT4O96024 378 aa10.18□□□□□ -0.78
COL12A1-209ENST00000493109 CYP11A1P05108 521 aa10.18□□□□□ -0.78
COL12A1-209ENST00000493109 LCE4AQ5TA78 99 aa10.18□□□□□ -0.78
COL12A1-209ENST00000493109 CARMIL2Q6F5E8 1435 aa10.17□□□□□ -0.78
COL12A1-209ENST00000493109 ASPAP45381 313 aa10.17□□□□□ -0.78
COL12A1-209ENST00000493109 ZNF211Q13398 564 aaPredicted RBP10.17□□□□□ -0.78
COL12A1-209ENST00000493109 WDR18Q9BV38 432 aa10.17□□□□□ -0.78
COL12A1-209ENST00000493109 KRTAP4-9Q9BYQ8 210 aa10.17□□□□□ -0.78
COL12A1-209ENST00000493109 ZNF576Q9H609 170 aa10.17□□□□□ -0.78
COL12A1-209ENST00000493109 PPP1R9AQ9ULJ8 1098 aa10.17□□□□□ -0.78
COL12A1-209ENST00000493109 ARID3CA6NKF2 412 aa10.16□□□□□ -0.78
COL12A1-209ENST00000493109 CYP27A1Q02318 531 aa10.16□□□□□ -0.78
COL12A1-209ENST00000493109 FKBP4Q02790 459 aaKnown RBP eCLIP10.16□□□□□ -0.78
COL12A1-209ENST00000493109 LGR6Q9HBX8 967 aa10.16□□□□□ -0.78
COL12A1-209ENST00000493109 DAGLAQ9Y4D2 1042 aa10.16□□□□□ -0.78
COL12A1-209ENST00000493109 U3KQE9 123 aa10.16□□□□□ -0.78
COL12A1-209ENST00000493109 EIF4EBP3O60516 100 aaPredicted RBP10.15□□□□□ -0.78
COL12A1-209ENST00000493109 AOC2O75106 756 aa10.15□□□□□ -0.78
COL12A1-209ENST00000493109 SF3B2Q13435 895 aaKnown RBP10.15□□□□□ -0.78
COL12A1-209ENST00000493109 OGFOD3Q6PK18 319 aa10.15□□□□□ -0.78
COL12A1-209ENST00000493109 BNIP3Q12983 259 aa10.14□□□□□ -0.79
COL12A1-209ENST00000493109 ZNF792Q3KQV3 632 aa10.14□□□□□ -0.79
COL12A1-209ENST00000493109 RAD18Q9NS91 495 aa10.14□□□□□ -0.79
COL12A1-209ENST00000493109 SLC5A6Q9Y289 635 aa10.14□□□□□ -0.79
COL12A1-209ENST00000493109 ITPKAP23677 461 aa10.13□□□□□ -0.79
COL12A1-209ENST00000493109 KIAA0319Q5VV43 1072 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms