RNA–Protein interactions for RNA: ENST00000492692.1

CSMD3-206, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 1,830 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-206ENST00000492692 CYB5RLQ6IPT4 315 aa12.69□□□□□ -0.38
CSMD3-206ENST00000492692 NUP133Q8WUM0 1156 aa12.69□□□□□ -0.38
CSMD3-206ENST00000492692 PPP1R13BQ96KQ4 1090 aa12.69□□□□□ -0.38
CSMD3-206ENST00000492692 BARX2Q9UMQ3 279 aaPredicted RBP12.69□□□□□ -0.38
CSMD3-206ENST00000492692 SHTN1A0MZ66 631 aa12.68□□□□□ -0.38
CSMD3-206ENST00000492692 ENO4A6NNW6 628 aa12.68□□□□□ -0.38
CSMD3-206ENST00000492692 ZEB2O60315 1214 aa12.68□□□□□ -0.38
CSMD3-206ENST00000492692 RPL13P26373 211 aaKnown RBP12.68□□□□□ -0.38
CSMD3-206ENST00000492692 TMPOP42166 694 aaKnown RBP12.68□□□□□ -0.38
CSMD3-206ENST00000492692 AARSP49588 968 aaKnown RBP eCLIP12.68□□□□□ -0.38
CSMD3-206ENST00000492692 IFFO1Q0D2I5 559 aa12.68□□□□□ -0.38
CSMD3-206ENST00000492692 PABPC4Q13310 644 aaKnown RBP eCLIP12.68□□□□□ -0.38
CSMD3-206ENST00000492692 CCDC57Q2TAC2 916 aa12.68□□□□□ -0.38
CSMD3-206ENST00000492692 CCDC181Q5TID7 509 aa12.68□□□□□ -0.38
CSMD3-206ENST00000492692 MYOCDQ8IZQ8 938 aa12.68□□□□□ -0.38
CSMD3-206ENST00000492692 PLEKHF1Q96S99 279 aa12.68□□□□□ -0.38
CSMD3-206ENST00000492692 GORASP1Q9BQQ3 440 aa12.68□□□□□ -0.38
CSMD3-206ENST00000492692 PARD6BQ9BYG5 372 aa12.68□□□□□ -0.38
CSMD3-206ENST00000492692 SLC39A2Q9NP94 309 aa12.68□□□□□ -0.38
CSMD3-206ENST00000492692 DNAAF2Q9NVR5 837 aaKnown RBP12.68□□□□□ -0.38
CSMD3-206ENST00000492692 RAB21Q9UL25 225 aa12.68□□□□□ -0.38
CSMD3-206ENST00000492692 ATP8A1Q9Y2Q0 1164 aa12.68□□□□□ -0.38
CSMD3-206ENST00000492692 RPGRIP1LQ68CZ1 1315 aa12.68□□□□□ -0.38
CSMD3-206ENST00000492692 A6NNZ2 444 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 TXLNAP40222 546 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 DCTN1Q14203 1278 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 TUBB8Q3ZCM7 444 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 BEND6Q5SZJ8 279 aaPredicted RBP12.67□□□□□ -0.38
CSMD3-206ENST00000492692 KCNN1Q92952 543 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 CCDC47Q96A33 483 aaKnown RBP12.67□□□□□ -0.38
CSMD3-206ENST00000492692 JAKMIP2Q96AA8 810 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 TRIM4Q9C037 500 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 GBP3Q9H0R5 595 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 VIPAS39Q9H9C1 493 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 GGA2Q9UJY4 613 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 G3BP2Q9UN86 482 aaKnown RBP12.67□□□□□ -0.38
CSMD3-206ENST00000492692 ANKRD26Q9UPS8 1709 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 PLCH2O75038 1416 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 CD109Q6YHK3 1445 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 GOLGA6L9A6NEM1 432 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 CCDC69A6NI79 296 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 U2AF1L5P0DN76 240 aaPredicted RBP12.67□□□□□ -0.38
CSMD3-206ENST00000492692 EIF4BP23588 611 aaKnown RBP12.67□□□□□ -0.38
CSMD3-206ENST00000492692 U2AF1Q01081 240 aaKnown RBP eCLIP12.67□□□□□ -0.38
CSMD3-206ENST00000492692 POSTNQ15063 836 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 KIF4BQ2VIQ3 1234 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 GALNT15Q8N3T1 639 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 AFAP1Q8N556 730 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 CCDC102AQ96A19 550 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 CHAMP1Q96JM3 812 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 CLIC6Q96NY7 704 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 VCPKMTQ9H867 229 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 TMEM165Q9HC07 324 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 RTEL1Q9NZ71 1219 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 IMPACTQ9P2X3 320 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 TRIM35Q9UPQ4 493 aa12.67□□□□□ -0.38
CSMD3-206ENST00000492692 FANCAO15360 1455 aa12.66□□□□□ -0.38
CSMD3-206ENST00000492692 ARAP3Q8WWN8 1544 aa12.66□□□□□ -0.38
CSMD3-206ENST00000492692 MYO1FO00160 1098 aa12.66□□□□□ -0.38
CSMD3-206ENST00000492692 ZBTB7BO15156 539 aaPredicted RBP12.66□□□□□ -0.38
CSMD3-206ENST00000492692 SKAP2O75563 359 aaPredicted RBP12.66□□□□□ -0.38
CSMD3-206ENST00000492692 KIAA0754O94854 1291 aa12.66□□□□□ -0.38
CSMD3-206ENST00000492692 USP4Q13107 963 aa12.66□□□□□ -0.38
CSMD3-206ENST00000492692 CUL3Q13618 768 aa12.66□□□□□ -0.38
CSMD3-206ENST00000492692 CFAP70Q5T0N1 1121 aa12.66□□□□□ -0.38
CSMD3-206ENST00000492692 THEMIS2Q5TEJ8 643 aa12.66□□□□□ -0.38
CSMD3-206ENST00000492692 GIMAP6Q6P9H5 292 aa12.66□□□□□ -0.38
CSMD3-206ENST00000492692 C16orf87Q6PH81 154 aa12.66□□□□□ -0.38
CSMD3-206ENST00000492692 GOLGA1Q92805 767 aa12.66□□□□□ -0.38
CSMD3-206ENST00000492692 FAM81BQ96LP2 452 aa12.66□□□□□ -0.38
CSMD3-206ENST00000492692 PRAM1Q96QH2 718 aa12.66□□□□□ -0.38
CSMD3-206ENST00000492692 CBX8Q9HC52 389 aa12.66□□□□□ -0.38
CSMD3-206ENST00000492692 ANKIB1Q9P2G1 1089 aa12.66□□□□□ -0.38
CSMD3-206ENST00000492692 ZNF510Q9Y2H8 683 aa12.66□□□□□ -0.38
CSMD3-206ENST00000492692 TTC21BQ7Z4L5 1316 aa12.66□□□□□ -0.38
CSMD3-206ENST00000492692 YTHDC2Q9H6S0 1430 aaKnown RBP12.66□□□□□ -0.38
CSMD3-206ENST00000492692 COL3A1P02461 1466 aaPredicted RBP12.66□□□□□ -0.38
CSMD3-206ENST00000492692 LRRC10BA6NIK2 292 aa12.65□□□□□ -0.38
CSMD3-206ENST00000492692 ATP6V1G1O75348 118 aa12.65□□□□□ -0.38
CSMD3-206ENST00000492692 CYP11B2P19099 503 aa12.65□□□□□ -0.38
CSMD3-206ENST00000492692 CCT5P48643 541 aa12.65□□□□□ -0.38
CSMD3-206ENST00000492692 TYRO3Q06418 890 aa12.65□□□□□ -0.38
CSMD3-206ENST00000492692 MPP3Q13368 585 aa12.65□□□□□ -0.38
CSMD3-206ENST00000492692 SLC4A8Q2Y0W8 1093 aa12.65□□□□□ -0.38
CSMD3-206ENST00000492692 AKNAD1Q5T1N1 836 aa12.65□□□□□ -0.38
CSMD3-206ENST00000492692 INTS3Q68E01 1043 aaKnown RBP12.65□□□□□ -0.38
CSMD3-206ENST00000492692 KIAA0825Q8IV33 1275 aa12.65□□□□□ -0.38
CSMD3-206ENST00000492692 SMYD1Q8NB12 490 aa12.65□□□□□ -0.38
CSMD3-206ENST00000492692 CCDC150Q8NCX0 1101 aa12.65□□□□□ -0.38
CSMD3-206ENST00000492692 CUL5Q93034 780 aa12.65□□□□□ -0.38
CSMD3-206ENST00000492692 BHMTQ93088 406 aa12.65□□□□□ -0.38
CSMD3-206ENST00000492692 TSR2Q969E8 191 aaKnown RBP12.65□□□□□ -0.38
CSMD3-206ENST00000492692 CARD6Q9BX69 1037 aa12.65□□□□□ -0.38
CSMD3-206ENST00000492692 OSBPL5Q9H0X9 879 aaPredicted RBP12.65□□□□□ -0.38
CSMD3-206ENST00000492692 FAM204AQ9H8W3 233 aa12.65□□□□□ -0.38
CSMD3-206ENST00000492692 BIN2Q9UBW5 565 aaPredicted RBP12.65□□□□□ -0.38
CSMD3-206ENST00000492692 L1RE1Q9UN81 338 aa12.65□□□□□ -0.38
CSMD3-206ENST00000492692 MEFVO15553 781 aaPredicted RBP12.65□□□□□ -0.39
CSMD3-206ENST00000492692 GBP7Q8N8V2 638 aaPredicted RBP12.65□□□□□ -0.39
CSMD3-206ENST00000492692 SCLT1Q96NL6 688 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms