RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 SPDYE5A6NIY4 337 aa7.13□□□□□ -1.27
SEC13-219ENST00000492602 PDHXO00330 501 aa7.13□□□□□ -1.27
SEC13-219ENST00000492602 IRF6O14896 467 aa7.13□□□□□ -1.27
SEC13-219ENST00000492602 ANXA1P04083 346 aa7.13□□□□□ -1.27
SEC13-219ENST00000492602 AIMP1Q12904 312 aaKnown RBP7.13□□□□□ -1.27
SEC13-219ENST00000492602 SHHQ15465 462 aa7.13□□□□□ -1.27
SEC13-219ENST00000492602 MTMR14Q8NCE2 650 aa7.13□□□□□ -1.27
SEC13-219ENST00000492602 BDP1A6H8Y1 2624 aa7.12□□□□□ -1.27
SEC13-219ENST00000492602 EIF2S2P20042 333 aaKnown RBP7.12□□□□□ -1.27
SEC13-219ENST00000492602 PRKAR2BP31323 418 aa7.12□□□□□ -1.27
SEC13-219ENST00000492602 EIF4A1P60842 406 aaKnown RBP7.12□□□□□ -1.27
SEC13-219ENST00000492602 GTF2IP78347 998 aa7.12□□□□□ -1.27
SEC13-219ENST00000492602 SMAD3P84022 425 aaKnown RBP7.12□□□□□ -1.27
SEC13-219ENST00000492602 MAPK8IP2Q13387 824 aaPredicted RBP7.12□□□□□ -1.27
SEC13-219ENST00000492602 IRF5Q13568 498 aa7.12□□□□□ -1.27
SEC13-219ENST00000492602 GRIN2CQ14957 1233 aa7.12□□□□□ -1.27
SEC13-219ENST00000492602 LRRC26Q2I0M4 334 aa7.12□□□□□ -1.27
SEC13-219ENST00000492602 CFAP100Q494V2 611 aa7.12□□□□□ -1.27
SEC13-219ENST00000492602 COPS6Q7L5N1 327 aa7.12□□□□□ -1.27
SEC13-219ENST00000492602 LRP10Q7Z4F1 713 aa7.12□□□□□ -1.27
SEC13-219ENST00000492602 ERO1BQ86YB8 467 aa7.12□□□□□ -1.27
SEC13-219ENST00000492602 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.12□□□□□ -1.272e-11■□□□□ 8.9
SEC13-219ENST00000492602 PRMT6Q96LA8 375 aaPredicted RBP7.12□□□□□ -1.27
SEC13-219ENST00000492602 COA1Q9GZY4 146 aa7.12□□□□□ -1.27
SEC13-219ENST00000492602 MED23Q9ULK4 1368 aa7.11□□□□□ -1.27
SEC13-219ENST00000492602 SPDYE2BA6NHP3 402 aa7.11□□□□□ -1.27
SEC13-219ENST00000492602 F8W031 263 aaPredicted RBP7.11□□□□□ -1.27
SEC13-219ENST00000492602 IRS4O14654 1257 aaPredicted RBP7.11□□□□□ -1.27
SEC13-219ENST00000492602 TNPO2O14787 897 aaKnown RBP7.11□□□□□ -1.27
SEC13-219ENST00000492602 SPDYE6P0CI01 402 aa7.11□□□□□ -1.27
SEC13-219ENST00000492602 BCRP11274 1271 aa7.11□□□□□ -1.27
SEC13-219ENST00000492602 PDE3AQ14432 1141 aa7.11□□□□□ -1.27
SEC13-219ENST00000492602 PDIA6Q15084 440 aa7.11□□□□□ -1.27
SEC13-219ENST00000492602 PROSER3Q2NL68 480 aa7.11□□□□□ -1.27
SEC13-219ENST00000492602 C9orf50Q5SZB4 431 aa7.11□□□□□ -1.27
SEC13-219ENST00000492602 ANKRD23Q86SG2 305 aa7.11□□□□□ -1.27
SEC13-219ENST00000492602 CDAN1Q8IWY9 1227 aa7.11□□□□□ -1.27
SEC13-219ENST00000492602 ZBTB38Q8NAP3 1195 aaPredicted RBP7.11□□□□□ -1.27
SEC13-219ENST00000492602 HMX1Q9NP08 348 aaPredicted RBP7.11□□□□□ -1.27
SEC13-219ENST00000492602 KNSTRNQ9Y448 316 aa7.11□□□□□ -1.27
SEC13-219ENST00000492602 SNCAIPQ9Y6H5 919 aa7.11□□□□□ -1.27
SEC13-219ENST00000492602 OTOFQ9HC10 1997 aa7.11□□□□□ -1.27
SEC13-219ENST00000492602 AOX1Q06278 1338 aa7.1□□□□□ -1.27
SEC13-219ENST00000492602 CYP2C8P10632 490 aa7.1□□□□□ -1.27
SEC13-219ENST00000492602 RBM5P52756 815 aaKnown RBP eCLIP7.1□□□□□ -1.27
SEC13-219ENST00000492602 PPIL2Q13356 520 aa7.1□□□□□ -1.27
SEC13-219ENST00000492602 TNFAIP1Q13829 316 aa7.1□□□□□ -1.27
SEC13-219ENST00000492602 POTEEQ6S8J3 1075 aa7.1□□□□□ -1.27
SEC13-219ENST00000492602 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.1□□□□□ -1.27
SEC13-219ENST00000492602 PNISRQ8TF01 805 aaKnown RBP7.1□□□□□ -1.27
SEC13-219ENST00000492602 XAGE3Q8WTP9 111 aa7.1□□□□□ -1.27
SEC13-219ENST00000492602 ZKSCAN4Q969J2 545 aaPredicted RBP7.1□□□□□ -1.27
SEC13-219ENST00000492602 CCDC85AQ96PX6 553 aaPredicted RBP7.1□□□□□ -1.27
SEC13-219ENST00000492602 PARK7Q99497 189 aaKnown RBP7.1□□□□□ -1.27
SEC13-219ENST00000492602 PRKAG2Q9UGJ0 569 aa7.1□□□□□ -1.27
SEC13-219ENST00000492602 OGDHLQ9ULD0 1010 aa7.1□□□□□ -1.27
SEC13-219ENST00000492602 DDX60LQ5H9U9 1706 aaKnown RBP7.1□□□□□ -1.27
SEC13-219ENST00000492602 FAM86C2PA6NEL3 165 aa7.09□□□□□ -1.27
SEC13-219ENST00000492602 ATP5J2-PTCD1G3V325 749 aa7.09□□□□□ -1.27
SEC13-219ENST00000492602 GPR37L1O60883 481 aa7.09□□□□□ -1.27
SEC13-219ENST00000492602 CCDC85BQ15834 202 aaPredicted RBP7.09□□□□□ -1.27
SEC13-219ENST00000492602 TXNRD3Q86VQ6 643 aa7.09□□□□□ -1.27
SEC13-219ENST00000492602 ANKRD18AQ8IVF6 992 aa7.09□□□□□ -1.27
SEC13-219ENST00000492602 TEPSINQ96N21 525 aa7.09□□□□□ -1.27
SEC13-219ENST00000492602 WRNIP1Q96S55 665 aa7.09□□□□□ -1.27
SEC13-219ENST00000492602 GAS2L1Q99501 681 aaPredicted RBP7.09□□□□□ -1.27
SEC13-219ENST00000492602 TMEM39BQ9GZU3 492 aa7.09□□□□□ -1.27
SEC13-219ENST00000492602 TCP10L2B9ZVM9 353 aa7.08□□□□□ -1.28
SEC13-219ENST00000492602 HTATSF1O43719 755 aaKnown RBP7.08□□□□□ -1.28
SEC13-219ENST00000492602 HMGCRP04035 888 aa7.08□□□□□ -1.28
SEC13-219ENST00000492602 U2AF1L5P0DN76 240 aaPredicted RBP7.08□□□□□ -1.28
SEC13-219ENST00000492602 COL6A1P12109 1028 aa7.08□□□□□ -1.28
SEC13-219ENST00000492602 CCT4P50991 539 aaKnown RBP7.08□□□□□ -1.28
SEC13-219ENST00000492602 U2AF1Q01081 240 aaKnown RBP eCLIP7.08□□□□□ -1.28
SEC13-219ENST00000492602 PPATQ06203 517 aa7.08□□□□□ -1.28
SEC13-219ENST00000492602 TRIM32Q13049 653 aa7.08□□□□□ -1.28
SEC13-219ENST00000492602 CCDC152Q4G0S7 254 aa7.08□□□□□ -1.28
SEC13-219ENST00000492602 CERS5Q8N5B7 392 aa7.08□□□□□ -1.28
SEC13-219ENST00000492602 COA7Q96BR5 231 aa7.08□□□□□ -1.28
SEC13-219ENST00000492602 RSPH6AQ9H0K4 717 aa7.08□□□□□ -1.28
SEC13-219ENST00000492602 SMIM22K7EJ46 135 aa7.07□□□□□ -1.28
SEC13-219ENST00000492602 BMP1P13497 986 aa7.07□□□□□ -1.28
SEC13-219ENST00000492602 TNNI2P48788 182 aa7.07□□□□□ -1.28
SEC13-219ENST00000492602 NHLH1Q02575 133 aa7.07□□□□□ -1.28
SEC13-219ENST00000492602 AKNAD1Q5T1N1 836 aa7.07□□□□□ -1.28
SEC13-219ENST00000492602 RIC3Q7Z5B4 369 aa7.07□□□□□ -1.28
SEC13-219ENST00000492602 ISCA1Q9BUE6 129 aa7.07□□□□□ -1.28
SEC13-219ENST00000492602 ZNF576Q9H609 170 aa7.07□□□□□ -1.28
SEC13-219ENST00000492602 TDRD3Q9H7E2 651 aaKnown RBP7.07□□□□□ -1.28
SEC13-219ENST00000492602 C11orf16Q9NQ32 467 aa7.07□□□□□ -1.28
SEC13-219ENST00000492602 ZNF70Q9UC06 446 aaPredicted RBP7.07□□□□□ -1.28
SEC13-219ENST00000492602 MINPP1Q9UNW1 487 aa7.07□□□□□ -1.28
SEC13-219ENST00000492602 KCNH4Q9UQ05 1017 aa7.07□□□□□ -1.28
SEC13-219ENST00000492602 TCF20Q9UGU0 1960 aaKnown RBP7.06□□□□□ -1.28
SEC13-219ENST00000492602 DNAJB2P25686 324 aa7.06□□□□□ -1.28
SEC13-219ENST00000492602 KLRK1P26718 216 aa7.06□□□□□ -1.28
SEC13-219ENST00000492602 ATN1P54259 1190 aaPredicted RBP7.06□□□□□ -1.28
SEC13-219ENST00000492602 FOXK2Q01167 660 aa7.06□□□□□ -1.28
SEC13-219ENST00000492602 SPDYE2Q495Y8 402 aa7.06□□□□□ -1.28
SEC13-219ENST00000492602 AMER1Q5JTC6 1135 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms