RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 HABP4Q5JVS0 413 aaKnown RBP12.5□□□□□ -0.41
TNFRSF9-203ENST00000492571 LDLRAD1Q5T700 205 aa12.5□□□□□ -0.41
TNFRSF9-203ENST00000492571 PTCD2Q8WV60 388 aaKnown RBP12.5□□□□□ -0.41
TNFRSF9-203ENST00000492571 MXD3Q9BW11 206 aa12.5□□□□□ -0.41
TNFRSF9-203ENST00000492571 DEFB129Q9H1M3 183 aa12.5□□□□□ -0.41
TNFRSF9-203ENST00000492571 MAP3K2Q9Y2U5 619 aa12.5□□□□□ -0.41
TNFRSF9-203ENST00000492571 DDX60Q8IY21 1712 aaKnown RBP12.5□□□□□ -0.41
TNFRSF9-203ENST00000492571 TAF1P21675 1872 aa12.5□□□□□ -0.41
TNFRSF9-203ENST00000492571 POLR2AP24928 1970 aaKnown RBP12.5□□□□□ -0.41
TNFRSF9-203ENST00000492571 MYBBP1AQ9BQG0 1328 aaKnown RBP12.49□□□□□ -0.41
TNFRSF9-203ENST00000492571 GTF2IP78347 998 aa12.49□□□□□ -0.41
TNFRSF9-203ENST00000492571 KSR2Q6VAB6 950 aa12.49□□□□□ -0.41
TNFRSF9-203ENST00000492571 OTOP1Q7RTM1 612 aa12.49□□□□□ -0.41
TNFRSF9-203ENST00000492571 TTLL11Q8NHH1 800 aa12.49□□□□□ -0.41
TNFRSF9-203ENST00000492571 STK31Q9BXU1 1019 aa12.49□□□□□ -0.41
TNFRSF9-203ENST00000492571 GREM2Q9H772 168 aa12.49□□□□□ -0.41
TNFRSF9-203ENST00000492571 IFT57Q9NWB7 429 aa12.49□□□□□ -0.41
TNFRSF9-203ENST00000492571 PPP2R3BQ9Y5P8 575 aa12.49□□□□□ -0.41
TNFRSF9-203ENST00000492571 ZNF804BA4D1E1 1349 aa12.48□□□□□ -0.41
TNFRSF9-203ENST00000492571 IREB2P48200 963 aaKnown RBP12.48□□□□□ -0.41
TNFRSF9-203ENST00000492571 NBPF11Q86T75 865 aa12.48□□□□□ -0.41
TNFRSF9-203ENST00000492571 EFCC1Q9HA90 598 aa12.48□□□□□ -0.41
TNFRSF9-203ENST00000492571 ADAMTS8Q9UP79 889 aa12.48□□□□□ -0.41
TNFRSF9-203ENST00000492571 PI4KAP2A4QPH2 592 aa12.47□□□□□ -0.41
TNFRSF9-203ENST00000492571 WDHD1O75717 1129 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF9-203ENST00000492571 LSM11P83369 360 aaKnown RBP eCLIP12.47□□□□□ -0.41
TNFRSF9-203ENST00000492571 PI4KAP1Q8N8J0 262 aa12.47□□□□□ -0.41
TNFRSF9-203ENST00000492571 RNF166Q96A37 237 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF9-203ENST00000492571 R3HDMLQ9H3Y0 253 aa12.47□□□□□ -0.41
TNFRSF9-203ENST00000492571 WTIPA6NIX2 430 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF9-203ENST00000492571 ZNF853P0CG23 659 aa12.46□□□□□ -0.41
TNFRSF9-203ENST00000492571 RBM5P52756 815 aaKnown RBP eCLIP12.46□□□□□ -0.41
TNFRSF9-203ENST00000492571 SP3Q02447 781 aa12.46□□□□□ -0.41
TNFRSF9-203ENST00000492571 MAP3K11Q16584 847 aa12.46□□□□□ -0.41
TNFRSF9-203ENST00000492571 WNK4Q96J92 1243 aa12.46□□□□□ -0.41
TNFRSF9-203ENST00000492571 PTPN22Q9Y2R2 807 aa12.46□□□□□ -0.41
TNFRSF9-203ENST00000492571 GTPBP6O43824 516 aaPredicted RBP12.45□□□□□ -0.42
TNFRSF9-203ENST00000492571 ITGA6P23229 1130 aa12.45□□□□□ -0.42
TNFRSF9-203ENST00000492571 ANKRD13AQ8IZ07 590 aa12.45□□□□□ -0.42
TNFRSF9-203ENST00000492571 MYH16Q9H6N6 1097 aa12.45□□□□□ -0.42
TNFRSF9-203ENST00000492571 VEZTQ9HBM0 779 aa12.45□□□□□ -0.42
TNFRSF9-203ENST00000492571 CD209Q9NNX6 404 aa12.45□□□□□ -0.42
TNFRSF9-203ENST00000492571 COL1A1P02452 1464 aaPredicted RBP12.45□□□□□ -0.42
TNFRSF9-203ENST00000492571 SCN9AQ15858 1988 aa12.44□□□□□ -0.42
TNFRSF9-203ENST00000492571 TNFAIP1Q13829 316 aa12.44□□□□□ -0.42
TNFRSF9-203ENST00000492571 UBE3BQ7Z3V4 1068 aa12.44□□□□□ -0.42
TNFRSF9-203ENST00000492571 ZNF804AQ7Z570 1209 aa12.44□□□□□ -0.42
TNFRSF9-203ENST00000492571 TXNRD3Q86VQ6 643 aa12.44□□□□□ -0.42
TNFRSF9-203ENST00000492571 C8orf58Q8NAV2 365 aa12.44□□□□□ -0.42
TNFRSF9-203ENST00000492571 MTMR14Q8NCE2 650 aa12.44□□□□□ -0.42
TNFRSF9-203ENST00000492571 CD99L2Q8TCZ2 262 aa12.44□□□□□ -0.42
TNFRSF9-203ENST00000492571 CRISPLD2Q9H0B8 497 aa12.44□□□□□ -0.42
TNFRSF9-203ENST00000492571 RYDENQ9NUL5 291 aaKnown RBP12.44□□□□□ -0.42
TNFRSF9-203ENST00000492571 ANKRD18BA2A2Z9 1011 aa12.43□□□□□ -0.42
TNFRSF9-203ENST00000492571 NEURL1BA8MQ27 555 aa12.43□□□□□ -0.42
TNFRSF9-203ENST00000492571 F8W031 263 aaPredicted RBP12.43□□□□□ -0.42
TNFRSF9-203ENST00000492571 IGF2BP3O00425 579 aaKnown RBP eCLIP12.43□□□□□ -0.42
TNFRSF9-203ENST00000492571 APAF1O14727 1248 aa12.43□□□□□ -0.42
TNFRSF9-203ENST00000492571 IGKV5-2P06315 115 aa12.43□□□□□ -0.42
TNFRSF9-203ENST00000492571 CRHR2Q13324 411 aa12.43□□□□□ -0.42
TNFRSF9-203ENST00000492571 CWF19L2Q2TBE0 894 aaKnown RBP12.43□□□□□ -0.42
TNFRSF9-203ENST00000492571 SLC4A8Q2Y0W8 1093 aa12.43□□□□□ -0.42
TNFRSF9-203ENST00000492571 CFAP100Q494V2 611 aa12.43□□□□□ -0.42
TNFRSF9-203ENST00000492571 SLC9C1Q4G0N8 1177 aa12.43□□□□□ -0.42
TNFRSF9-203ENST00000492571 ARMC5Q96C12 935 aa12.43□□□□□ -0.42
TNFRSF9-203ENST00000492571 ZBED3Q96IU2 234 aaPredicted RBP12.43□□□□□ -0.42
TNFRSF9-203ENST00000492571 CLMNQ96JQ2 1002 aa12.43□□□□□ -0.42
TNFRSF9-203ENST00000492571 FZD1Q9UP38 647 aa12.43□□□□□ -0.42
TNFRSF9-203ENST00000492571 COL4A1P02462 1669 aa12.42□□□□□ -0.42
TNFRSF9-203ENST00000492571 CLRN2A0PK11 232 aa12.42□□□□□ -0.42
TNFRSF9-203ENST00000492571 H7C1W4 665 aa12.42□□□□□ -0.42
TNFRSF9-203ENST00000492571 EN2P19622 333 aaPredicted RBP12.42□□□□□ -0.42
TNFRSF9-203ENST00000492571 PBX2P40425 430 aa12.42□□□□□ -0.42
TNFRSF9-203ENST00000492571 CHRNDQ07001 517 aa12.42□□□□□ -0.42
TNFRSF9-203ENST00000492571 KIF22Q14807 665 aa12.42□□□□□ -0.42
TNFRSF9-203ENST00000492571 ZFYVE28Q9HCC9 887 aa12.42□□□□□ -0.42
TNFRSF9-203ENST00000492571 FKBP1AP62942 108 aaKnown RBP12.41□□□□□ -0.42
TNFRSF9-203ENST00000492571 DDX10Q13206 875 aaKnown RBP12.41□□□□□ -0.42
TNFRSF9-203ENST00000492571 IFIT5Q13325 482 aaKnown RBP12.41□□□□□ -0.42
TNFRSF9-203ENST00000492571 RASA3Q14644 834 aa12.41□□□□□ -0.42
TNFRSF9-203ENST00000492571 NBPF12Q5TAG4 269 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF9-203ENST00000492571 PRMT6Q96LA8 375 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF9-203ENST00000492571 PLA2G12BQ9BX93 195 aa12.41□□□□□ -0.42
TNFRSF9-203ENST00000492571 USP2O75604 605 aaPredicted RBP12.4□□□□□ -0.42
TNFRSF9-203ENST00000492571 KLRK1P26718 216 aa12.4□□□□□ -0.42
TNFRSF9-203ENST00000492571 TNNI2P48788 182 aa12.4□□□□□ -0.42
TNFRSF9-203ENST00000492571 GTF2A2P52657 109 aa12.4□□□□□ -0.42
TNFRSF9-203ENST00000492571 GCKRQ14397 625 aa12.4□□□□□ -0.42
TNFRSF9-203ENST00000492571 TAF7LQ5H9L4 462 aa12.4□□□□□ -0.42
TNFRSF9-203ENST00000492571 OPTNQ96CV9 577 aa12.4□□□□□ -0.42
TNFRSF9-203ENST00000492571 ELP3Q9H9T3 547 aa12.4□□□□□ -0.42
TNFRSF9-203ENST00000492571 CHMP3Q9Y3E7 222 aa12.4□□□□□ -0.42
TNFRSF9-203ENST00000492571 CSADQ9Y600 493 aa12.4□□□□□ -0.42
TNFRSF9-203ENST00000492571 TESPA1A2RU30 521 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF9-203ENST00000492571 TAF5LO75529 589 aa12.39□□□□□ -0.43
TNFRSF9-203ENST00000492571 CSF1RP07333 972 aa12.39□□□□□ -0.43
TNFRSF9-203ENST00000492571 TAF1CQ15572 869 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF9-203ENST00000492571 C15orf52Q6ZUT6 534 aaKnown RBP12.39□□□□□ -0.43
TNFRSF9-203ENST00000492571 CCL15-CCL14A0A0B4J2E2 113 aa12.38□□□□□ -0.43
TNFRSF9-203ENST00000492571 IL1R1P14778 569 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms