RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 CABS1Q96KC9 395 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 FTOQ9C0B1 505 aaKnown RBP eCLIP12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 VEZTQ9HBM0 779 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 ABCB6Q9NP58 842 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 A0A1W2PQ27 194 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 A0A1W2PQ64 194 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 A0A1W2PQD8 194 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 PFKFB1P16118 471 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 SSRP1Q08945 709 aaKnown RBP12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 IFFO1Q0D2I5 559 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 TMTC1Q8IUR5 882 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 RGS22Q8NE09 1264 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 PSD3Q9NYI0 1048 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 CEP126Q9P2H0 1117 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 KCNH3Q9ULD8 1083 aa12.81□□□□□ -0.36
CRNKL1-204ENST00000490910 TTC21AQ8NDW8 1320 aa12.8□□□□□ -0.36
CRNKL1-204ENST00000490910 ADCY10Q96PN6 1610 aa12.8□□□□□ -0.36
CRNKL1-204ENST00000490910 SND1Q7KZF4 910 aaKnown RBP eCLIP12.8□□□□□ -0.36
CRNKL1-204ENST00000490910 CCDC82Q8N4S0 544 aa12.8□□□□□ -0.36
CRNKL1-204ENST00000490910 INCENPQ9NQS7 918 aa12.8□□□□□ -0.36
CRNKL1-204ENST00000490910 NBPF7P0C2Y1 421 aaPredicted RBP12.8□□□□□ -0.36
CRNKL1-204ENST00000490910 EPS15P42566 896 aa12.8□□□□□ -0.36
CRNKL1-204ENST00000490910 KIF5AQ12840 1032 aa12.8□□□□□ -0.36
CRNKL1-204ENST00000490910 CCDC50Q8IVM0 306 aa12.8□□□□□ -0.36
CRNKL1-204ENST00000490910 JPH2Q9BR39 696 aaPredicted RBP12.8□□□□□ -0.36
CRNKL1-204ENST00000490910 TACC1O75410 805 aa12.8□□□□□ -0.36
CRNKL1-204ENST00000490910 SPECC1Q5M775 1068 aa12.8□□□□□ -0.36
CRNKL1-204ENST00000490910 FKBP15Q5T1M5 1219 aa12.8□□□□□ -0.36
CRNKL1-204ENST00000490910 GOLGA6L10A0A0M3HER8 536 aa12.79□□□□□ -0.36
CRNKL1-204ENST00000490910 TRIM21P19474 475 aaKnown RBP12.79□□□□□ -0.36
CRNKL1-204ENST00000490910 NEDD9Q14511 834 aa12.79□□□□□ -0.36
CRNKL1-204ENST00000490910 UBAC1Q9BSL1 405 aa12.79□□□□□ -0.36
CRNKL1-204ENST00000490910 CEP83Q9Y592 693 aa12.79□□□□□ -0.36
CRNKL1-204ENST00000490910 KCNJ6P48051 423 aa12.79□□□□□ -0.36
CRNKL1-204ENST00000490910 PPP2R5AQ15172 486 aa12.79□□□□□ -0.36
CRNKL1-204ENST00000490910 CCDC96Q2M329 555 aa12.79□□□□□ -0.36
CRNKL1-204ENST00000490910 MYSM1Q5VVJ2 828 aa12.79□□□□□ -0.36
CRNKL1-204ENST00000490910 ARMCX5Q6P1M9 558 aa12.79□□□□□ -0.36
CRNKL1-204ENST00000490910 EID1Q9Y6B2 187 aa12.79□□□□□ -0.36
CRNKL1-204ENST00000490910 MYOM2P54296 1465 aa12.79□□□□□ -0.36
CRNKL1-204ENST00000490910 A0A0D9SFI3 127 aa12.79□□□□□ -0.36
CRNKL1-204ENST00000490910 GRM8O00222 908 aa12.79□□□□□ -0.36
CRNKL1-204ENST00000490910 MAP2K1Q02750 393 aaPredicted RBP12.79□□□□□ -0.36
CRNKL1-204ENST00000490910 PNOCQ13519 176 aa12.79□□□□□ -0.36
CRNKL1-204ENST00000490910 CYP26C1Q6V0L0 522 aa12.79□□□□□ -0.36
CRNKL1-204ENST00000490910 CCDC129Q6ZRS4 1044 aa12.79□□□□□ -0.36
CRNKL1-204ENST00000490910 SPATS2Q86XZ4 545 aaKnown RBP12.79□□□□□ -0.36
CRNKL1-204ENST00000490910 ABTB2Q8N961 1025 aa12.79□□□□□ -0.36
CRNKL1-204ENST00000490910 KRI1Q8N9T8 703 aaKnown RBP12.79□□□□□ -0.36
CRNKL1-204ENST00000490910 TANGO6Q9C0B7 1094 aa12.79□□□□□ -0.36
CRNKL1-204ENST00000490910 ABCC1P33527 1531 aa12.78□□□□□ -0.36
CRNKL1-204ENST00000490910 PRC1O43663 620 aa12.78□□□□□ -0.36
CRNKL1-204ENST00000490910 GIGYF1O75420 1035 aaPredicted RBP12.78□□□□□ -0.36
CRNKL1-204ENST00000490910 ATP1A3P13637 1013 aa12.78□□□□□ -0.36
CRNKL1-204ENST00000490910 RRAGBQ5VZM2 374 aa12.78□□□□□ -0.36
CRNKL1-204ENST00000490910 TRMT44Q8IYL2 757 aaKnown RBP12.78□□□□□ -0.36
CRNKL1-204ENST00000490910 DYDC1Q8WWB3 177 aa12.78□□□□□ -0.36
CRNKL1-204ENST00000490910 RPGRIP1Q96KN7 1286 aa12.78□□□□□ -0.36
CRNKL1-204ENST00000490910 CXorf56Q9H5V9 222 aa12.78□□□□□ -0.36
CRNKL1-204ENST00000490910 BRD2P25440 801 aaKnown RBP12.78□□□□□ -0.36
CRNKL1-204ENST00000490910 SECISBP2LQ93073 1101 aaKnown RBP12.78□□□□□ -0.36
CRNKL1-204ENST00000490910 SLC26A6Q9BXS9 759 aa12.78□□□□□ -0.36
CRNKL1-204ENST00000490910 LUC7L2Q9Y383 392 aaKnown RBP12.78□□□□□ -0.36
CRNKL1-204ENST00000490910 SLC12A7Q9Y666 1083 aa12.78□□□□□ -0.36
CRNKL1-204ENST00000490910 AKR1B10O60218 316 aa12.78□□□□□ -0.36
CRNKL1-204ENST00000490910 IDEP14735 1019 aa12.78□□□□□ -0.36
CRNKL1-204ENST00000490910 CMA1P23946 247 aa12.78□□□□□ -0.36
CRNKL1-204ENST00000490910 CCT6AP40227 531 aaKnown RBP12.78□□□□□ -0.36
CRNKL1-204ENST00000490910 PTPN21Q16825 1174 aa12.78□□□□□ -0.36
CRNKL1-204ENST00000490910 VSTM4Q8IW00 320 aa12.78□□□□□ -0.36
CRNKL1-204ENST00000490910 SLF1Q9BQI6 1058 aa12.78□□□□□ -0.36
CRNKL1-204ENST00000490910 PFKFB2O60825 505 aa12.77□□□□□ -0.36
CRNKL1-204ENST00000490910 SSR1P43307 286 aaKnown RBP12.77□□□□□ -0.36
CRNKL1-204ENST00000490910 NECTIN1Q15223 517 aa12.77□□□□□ -0.36
CRNKL1-204ENST00000490910 CPLX4Q7Z7G2 160 aa12.77□□□□□ -0.36
CRNKL1-204ENST00000490910 DHX40Q8IX18 779 aaKnown RBP12.77□□□□□ -0.36
CRNKL1-204ENST00000490910 MYD88Q99836 296 aa12.77□□□□□ -0.36
CRNKL1-204ENST00000490910 NPATQ14207 1427 aa12.77□□□□□ -0.36
CRNKL1-204ENST00000490910 LONRF3Q496Y0 759 aa12.77□□□□□ -0.36
CRNKL1-204ENST00000490910 RTEL1Q9NZ71 1219 aa12.77□□□□□ -0.36
CRNKL1-204ENST00000490910 KIF1CO43896 1103 aaKnown RBP12.77□□□□□ -0.37
CRNKL1-204ENST00000490910 SLC35F6Q8N357 371 aa12.77□□□□□ -0.37
CRNKL1-204ENST00000490910 PI4K2BQ8TCG2 481 aa12.77□□□□□ -0.37
CRNKL1-204ENST00000490910 CPSF2Q9P2I0 782 aaKnown RBP12.77□□□□□ -0.37
CRNKL1-204ENST00000490910 ODF2LQ9ULJ1 636 aa12.77□□□□□ -0.37
CRNKL1-204ENST00000490910 SAR1BQ9Y6B6 198 aa12.77□□□□□ -0.37
CRNKL1-204ENST00000490910 TRPM2O94759 1503 aa12.77□□□□□ -0.37
CRNKL1-204ENST00000490910 TULP2O00295 520 aa12.77□□□□□ -0.37
CRNKL1-204ENST00000490910 KRT9P35527 623 aa12.77□□□□□ -0.37
CRNKL1-204ENST00000490910 SCRN1Q12765 414 aa12.77□□□□□ -0.37
CRNKL1-204ENST00000490910 WWC2Q6AWC2 1192 aa12.77□□□□□ -0.37
CRNKL1-204ENST00000490910 WWC3Q9ULE0 1092 aa12.77□□□□□ -0.37
CRNKL1-204ENST00000490910 MAP3K5Q99683 1374 aa12.76□□□□□ -0.37
CRNKL1-204ENST00000490910 CUTAO60888 179 aa12.76□□□□□ -0.37
CRNKL1-204ENST00000490910 TBC1D8O95759 1140 aa12.76□□□□□ -0.37
CRNKL1-204ENST00000490910 MTIF2P46199 727 aaKnown RBP12.76□□□□□ -0.37
CRNKL1-204ENST00000490910 FAM169AQ9Y6X4 670 aa12.76□□□□□ -0.37
CRNKL1-204ENST00000490910 CROCC2H7BZ55 1655 aa12.76□□□□□ -0.37
CRNKL1-204ENST00000490910 UBXN1Q04323 297 aa12.76□□□□□ -0.37
CRNKL1-204ENST00000490910 ZRSR2Q15696 482 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms