RNA–Protein interactions for RNA: ENST00000490166.1

RPN1-205, Transcript of ribophorin I, humanhuman

TSL 3

Gene RPN1, Length 573 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-205ENST00000490166 DOLKQ9UPQ8 538 aa5.18□□□□□ -1.58
RPN1-205ENST00000490166 ZBTB1Q9Y2K1 713 aa5.18□□□□□ -1.58
RPN1-205ENST00000490166 PXDNLA1KZ92 1463 aa5.18□□□□□ -1.58
RPN1-205ENST00000490166 USP42Q9H9J4 1324 aaKnown RBP5.18□□□□□ -1.58
RPN1-205ENST00000490166 KDRP35968 1356 aa5.17□□□□□ -1.58
RPN1-205ENST00000490166 A0A087WZG4 1122 aa5.17□□□□□ -1.58
RPN1-205ENST00000490166 USP17L3A6NCW0 530 aa5.17□□□□□ -1.58
RPN1-205ENST00000490166 USP17L4A6NCW7 530 aa5.17□□□□□ -1.58
RPN1-205ENST00000490166 FIGNL2A6NMB9 653 aa5.17□□□□□ -1.58
RPN1-205ENST00000490166 USP17L5A8MUK1 530 aa5.17□□□□□ -1.58
RPN1-205ENST00000490166 H0YIN7 160 aa5.17□□□□□ -1.58
RPN1-205ENST00000490166 TCERG1O14776 1098 aaKnown RBP5.17□□□□□ -1.58
RPN1-205ENST00000490166 SKIP12755 728 aa5.17□□□□□ -1.58
RPN1-205ENST00000490166 LMOD1P29536 600 aaPredicted RBP5.17□□□□□ -1.58
RPN1-205ENST00000490166 GPC1P35052 558 aa5.17□□□□□ -1.58
RPN1-205ENST00000490166 SCTRP47872 440 aa5.17□□□□□ -1.58
RPN1-205ENST00000490166 DCTN1Q14203 1278 aa5.17□□□□□ -1.58
RPN1-205ENST00000490166 LCE2AQ5TA79 106 aaPredicted RBP5.17□□□□□ -1.58
RPN1-205ENST00000490166 USP17L2Q6R6M4 530 aa5.17□□□□□ -1.58
RPN1-205ENST00000490166 KIF6Q6ZMV9 814 aa5.17□□□□□ -1.58
RPN1-205ENST00000490166 USP17L1Q7RTZ2 530 aa5.17□□□□□ -1.58
RPN1-205ENST00000490166 NBPF5PQ86XG9 351 aaPredicted RBP5.17□□□□□ -1.58
RPN1-205ENST00000490166 CNBD1Q8NA66 436 aa5.17□□□□□ -1.58
RPN1-205ENST00000490166 PLPP7Q8NBV4 271 aa5.17□□□□□ -1.58
RPN1-205ENST00000490166 ZNF428Q96B54 188 aa5.17□□□□□ -1.58
RPN1-205ENST00000490166 NLRP3Q96P20 1036 aa5.17□□□□□ -1.58
RPN1-205ENST00000490166 TMX4Q9H1E5 349 aaPredicted RBP5.17□□□□□ -1.58
RPN1-205ENST00000490166 OSBPL3Q9H4L5 887 aa5.17□□□□□ -1.58
RPN1-205ENST00000490166 ZNF652Q9Y2D9 606 aa5.17□□□□□ -1.58
RPN1-205ENST00000490166 KDM2BQ8NHM5 1336 aa5.17□□□□□ -1.58
RPN1-205ENST00000490166 NCAPD2Q15021 1401 aa5.16□□□□□ -1.58
RPN1-205ENST00000490166 C10orf71Q711Q0 1435 aa5.16□□□□□ -1.58
RPN1-205ENST00000490166 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.16□□□□□ -1.58
RPN1-205ENST00000490166 A0A1W2PRU2 124 aa5.16□□□□□ -1.58
RPN1-205ENST00000490166 H3BM21 787 aa5.16□□□□□ -1.58
RPN1-205ENST00000490166 ATG7O95352 703 aa5.16□□□□□ -1.58
RPN1-205ENST00000490166 GNRH1P01148 92 aa5.16□□□□□ -1.58
RPN1-205ENST00000490166 SERPINB2P05120 415 aa5.16□□□□□ -1.58
RPN1-205ENST00000490166 MYL6BP14649 208 aa5.16□□□□□ -1.58
RPN1-205ENST00000490166 RNF144AP50876 292 aaPredicted RBP5.16□□□□□ -1.58
RPN1-205ENST00000490166 DDR1Q08345 913 aa5.16□□□□□ -1.58
RPN1-205ENST00000490166 GRM1Q13255 1194 aa5.16□□□□□ -1.58
RPN1-205ENST00000490166 RNF217Q8TC41 542 aa5.16□□□□□ -1.58
RPN1-205ENST00000490166 IRF7Q92985 503 aa5.16□□□□□ -1.58
RPN1-205ENST00000490166 SLC4A9Q96Q91 983 aa5.16□□□□□ -1.58
RPN1-205ENST00000490166 NMRK2Q9NPI5 230 aa5.16□□□□□ -1.58
RPN1-205ENST00000490166 MAP2P11137 1827 aaKnown RBP5.16□□□□□ -1.58
RPN1-205ENST00000490166 C4AP0C0L4 1744 aa5.15□□□□□ -1.58
RPN1-205ENST00000490166 QSER1Q2KHR3 1735 aa5.15□□□□□ -1.58
RPN1-205ENST00000490166 MEN1O00255 615 aa5.15□□□□□ -1.59
RPN1-205ENST00000490166 C21orf2O43822 256 aa5.15□□□□□ -1.59
RPN1-205ENST00000490166 A1BGP04217 495 aa5.15□□□□□ -1.59
RPN1-205ENST00000490166 CYP19A1P11511 503 aaPredicted RBP5.15□□□□□ -1.59
RPN1-205ENST00000490166 PPP2R1AP30153 589 aa5.15□□□□□ -1.59
RPN1-205ENST00000490166 TGFB2P61812 414 aa5.15□□□□□ -1.59
RPN1-205ENST00000490166 PTSQ03393 145 aa5.15□□□□□ -1.59
RPN1-205ENST00000490166 CLN3Q13286 438 aa5.15□□□□□ -1.59
RPN1-205ENST00000490166 ELOAQ14241 798 aaKnown RBP5.15□□□□□ -1.59
RPN1-205ENST00000490166 NFIXQ14938 502 aa5.15□□□□□ -1.59
RPN1-205ENST00000490166 TSGA10IPQ3SY00 556 aa5.15□□□□□ -1.59
RPN1-205ENST00000490166 FOXD4L5Q5VV16 416 aaPredicted RBP5.15□□□□□ -1.59
RPN1-205ENST00000490166 LYSMD3Q7Z3D4 306 aa5.15□□□□□ -1.59
RPN1-205ENST00000490166 CCDC146Q8IYE0 955 aa5.15□□□□□ -1.59
RPN1-205ENST00000490166 ZNF496Q96IT1 587 aaPredicted RBP5.15□□□□□ -1.59
RPN1-205ENST00000490166 SETDB2Q96T68 719 aa5.15□□□□□ -1.59
RPN1-205ENST00000490166 VRTNQ9H8Y1 702 aa5.15□□□□□ -1.59
RPN1-205ENST00000490166 MIS18AQ9NYP9 233 aa5.15□□□□□ -1.59
RPN1-205ENST00000490166 RRP7AQ9Y3A4 280 aaKnown RBP5.15□□□□□ -1.59
RPN1-205ENST00000490166 ITGB4P16144 1822 aa5.15□□□□□ -1.59
RPN1-205ENST00000490166 SOS1Q07889 1333 aaPredicted RBP5.15□□□□□ -1.59
RPN1-205ENST00000490166 CARMIL3Q8ND23 1372 aa5.15□□□□□ -1.59
RPN1-205ENST00000490166 PLEKHG2Q9H7P9 1386 aa5.15□□□□□ -1.59
RPN1-205ENST00000490166 KCPQ6ZWJ8 1503 aa5.14□□□□□ -1.59
RPN1-205ENST00000490166 POLRMTO00411 1230 aaKnown RBP5.14□□□□□ -1.59
RPN1-205ENST00000490166 PPFIA3O75145 1194 aa5.14□□□□□ -1.59
RPN1-205ENST00000490166 EIF2S2P20042 333 aaKnown RBP5.14□□□□□ -1.59
RPN1-205ENST00000490166 RFX1P22670 979 aa5.14□□□□□ -1.59
RPN1-205ENST00000490166 GPTP24298 496 aa5.14□□□□□ -1.59
RPN1-205ENST00000490166 PDE6BP35913 854 aa5.14□□□□□ -1.59
RPN1-205ENST00000490166 VEGFBP49765 207 aa5.14□□□□□ -1.59
RPN1-205ENST00000490166 PDE4CQ08493 712 aa5.14□□□□□ -1.59
RPN1-205ENST00000490166 AIMP1Q12904 312 aaKnown RBP5.14□□□□□ -1.59
RPN1-205ENST00000490166 NCOA4Q13772 614 aa5.14□□□□□ -1.59
RPN1-205ENST00000490166 EML3Q32P44 896 aa5.14□□□□□ -1.59
RPN1-205ENST00000490166 EAPPQ56P03 285 aaPredicted RBP5.14□□□□□ -1.59
RPN1-205ENST00000490166 OXLD1Q5BKU9 147 aa5.14□□□□□ -1.59
RPN1-205ENST00000490166 TBC1D9BQ66K14 1250 aa5.14□□□□□ -1.59
RPN1-205ENST00000490166 INTS5Q6P9B9 1019 aaKnown RBP5.14□□□□□ -1.59
RPN1-205ENST00000490166 ZNF790Q6PG37 636 aa5.14□□□□□ -1.59
RPN1-205ENST00000490166 TTLL6Q8N841 843 aa5.14□□□□□ -1.59
RPN1-205ENST00000490166 RPGRQ92834 1020 aaKnown RBP5.14□□□□□ -1.59
RPN1-205ENST00000490166 THUMPD2Q9BTF0 503 aaKnown RBP5.14□□□□□ -1.59
RPN1-205ENST00000490166 TRAIPQ9BWF2 469 aa5.14□□□□□ -1.59
RPN1-205ENST00000490166 RRAGCQ9HB90 399 aa5.14□□□□□ -1.59
RPN1-205ENST00000490166 ARHGEF10LQ9HCE6 1279 aa5.14□□□□□ -1.59
RPN1-205ENST00000490166 NARFQ9UHQ1 456 aa5.14□□□□□ -1.59
RPN1-205ENST00000490166 TSPYL4Q9UJ04 414 aa5.14□□□□□ -1.59
RPN1-205ENST00000490166 NIP7Q9Y221 180 aaKnown RBP eCLIP5.14□□□□□ -1.59
RPN1-205ENST00000490166 USTQ9Y2C2 406 aa5.14□□□□□ -1.59
RPN1-205ENST00000490166 HEG1Q9ULI3 1381 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms