RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 C12orf50Q8NA57 414 aaPredicted RBP5.57□□□□□ -1.52
DEPDC1-204ENST00000489862 GPR152Q8TDT2 470 aa5.57□□□□□ -1.52
DEPDC1-204ENST00000489862 WNT8BQ93098 351 aa5.57□□□□□ -1.52
DEPDC1-204ENST00000489862 KLHDC7BQ96G42 594 aa5.57□□□□□ -1.52
DEPDC1-204ENST00000489862 MBNL3Q9NUK0 354 aaKnown RBP5.57□□□□□ -1.52
DEPDC1-204ENST00000489862 FAM170BA6NMN3 283 aa5.56□□□□□ -1.52
DEPDC1-204ENST00000489862 UBAP1LF5GYI3 381 aa5.56□□□□□ -1.52
DEPDC1-204ENST00000489862 ADMP35318 185 aa5.56□□□□□ -1.52
DEPDC1-204ENST00000489862 NUTM2GQ5VZR2 741 aa5.56□□□□□ -1.52
DEPDC1-204ENST00000489862 CIAPIN1Q6FI81 312 aa5.56□□□□□ -1.52
DEPDC1-204ENST00000489862 NLRP13Q86W25 1043 aa5.56□□□□□ -1.52
DEPDC1-204ENST00000489862 LRRN4CLQ8ND94 238 aa5.56□□□□□ -1.52
DEPDC1-204ENST00000489862 PIK3R5Q8WYR1 880 aa5.56□□□□□ -1.52
DEPDC1-204ENST00000489862 SPACA7Q96KW9 195 aa5.56□□□□□ -1.52
DEPDC1-204ENST00000489862 C20orf173Q96LM9 149 aa5.56□□□□□ -1.52
DEPDC1-204ENST00000489862 OSGEPQ9NPF4 335 aa5.56□□□□□ -1.52
DEPDC1-204ENST00000489862 FOXD2O60548 495 aaPredicted RBP5.56□□□□□ -1.52
DEPDC1-204ENST00000489862 C1QTNF9P0C862 333 aa5.56□□□□□ -1.52
DEPDC1-204ENST00000489862 SYN1P17600 705 aa5.56□□□□□ -1.52
DEPDC1-204ENST00000489862 CEP135Q66GS9 1140 aa5.56□□□□□ -1.52
DEPDC1-204ENST00000489862 CYP4F12Q9HCS2 524 aa5.56□□□□□ -1.52
DEPDC1-204ENST00000489862 CARNS1A5YM72 827 aa5.55□□□□□ -1.52
DEPDC1-204ENST00000489862 TMEM88BA6NKF7 163 aa5.55□□□□□ -1.52
DEPDC1-204ENST00000489862 ATCAYQ86WG3 371 aa5.55□□□□□ -1.52
DEPDC1-204ENST00000489862 FAM13BQ9NYF5 915 aa5.55□□□□□ -1.52
DEPDC1-204ENST00000489862 CABP4P57796 275 aa5.54□□□□□ -1.52
DEPDC1-204ENST00000489862 PIP4K2BP78356 416 aa5.54□□□□□ -1.52
DEPDC1-204ENST00000489862 COL13A1Q5TAT6 717 aaPredicted RBP5.54□□□□□ -1.52
DEPDC1-204ENST00000489862 WFDC3Q8IUB2 231 aa5.54□□□□□ -1.52
DEPDC1-204ENST00000489862 ABTB2Q8N961 1025 aa5.54□□□□□ -1.52
DEPDC1-204ENST00000489862 FLAD1Q8NFF5 587 aa5.54□□□□□ -1.52
DEPDC1-204ENST00000489862 ARID3AQ99856 593 aa5.54□□□□□ -1.52
DEPDC1-204ENST00000489862 ZNF503-AS2A6NEH8 195 aa5.53□□□□□ -1.52
DEPDC1-204ENST00000489862 SMG8Q8ND04 991 aaKnown RBP5.53□□□□□ -1.52
DEPDC1-204ENST00000489862 OR13H1Q8NG92 308 aa5.53□□□□□ -1.52
DEPDC1-204ENST00000489862 FBLIM1Q8WUP2 373 aa5.53□□□□□ -1.52
DEPDC1-204ENST00000489862 FNDC3AQ9Y2H6 1198 aaKnown RBP5.53□□□□□ -1.52
DEPDC1-204ENST00000489862 NPIPB6E9PJ23 425 aa5.52□□□□□ -1.53
DEPDC1-204ENST00000489862 PPP1R15AO75807 674 aaPredicted RBP5.52□□□□□ -1.53
DEPDC1-204ENST00000489862 SSFA2P28290 1259 aa5.52□□□□□ -1.53
DEPDC1-204ENST00000489862 TTC39BQ5VTQ0 682 aaPredicted RBP5.52□□□□□ -1.53
DEPDC1-204ENST00000489862 GGNQ86UU5 652 aa5.52□□□□□ -1.53
DEPDC1-204ENST00000489862 NUDT16Q96DE0 195 aaKnown RBP5.52□□□□□ -1.53
DEPDC1-204ENST00000489862 CYP2E1P05181 493 aaPredicted RBP5.52□□□□□ -1.53
DEPDC1-204ENST00000489862 CD8BP10966 210 aa5.52□□□□□ -1.53
DEPDC1-204ENST00000489862 PTPRAP18433 802 aa5.52□□□□□ -1.53
DEPDC1-204ENST00000489862 ARL4DP49703 201 aa5.52□□□□□ -1.53
DEPDC1-204ENST00000489862 NLRP12P59046 1061 aa5.52□□□□□ -1.53
DEPDC1-204ENST00000489862 BNIP3Q12983 259 aa5.52□□□□□ -1.53
DEPDC1-204ENST00000489862 MTMR3Q13615 1198 aa5.52□□□□□ -1.53
DEPDC1-204ENST00000489862 HELQQ8TDG4 1101 aa5.52□□□□□ -1.53
DEPDC1-204ENST00000489862 GTF3C2Q8WUA4 911 aaPredicted RBP5.52□□□□□ -1.53
DEPDC1-204ENST00000489862 SUGCTQ9HAC7 445 aa5.52□□□□□ -1.53
DEPDC1-204ENST00000489862 ATP11AP98196 1134 aa5.51□□□□□ -1.53
DEPDC1-204ENST00000489862 EDEM1Q92611 657 aa5.51□□□□□ -1.53
DEPDC1-204ENST00000489862 EZH1Q92800 747 aaPredicted RBP5.51□□□□□ -1.53
DEPDC1-204ENST00000489862 ABI2Q9NYB9 513 aaPredicted RBP5.51□□□□□ -1.53
DEPDC1-204ENST00000489862 TMEM63CQ9P1W3 806 aa5.51□□□□□ -1.53
DEPDC1-204ENST00000489862 ADAMTS6Q9UKP5 1117 aa5.51□□□□□ -1.53
DEPDC1-204ENST00000489862 A6NHS1 94 aa5.5□□□□□ -1.53
DEPDC1-204ENST00000489862 H3BRJ5 948 aa5.5□□□□□ -1.53
DEPDC1-204ENST00000489862 SUV39H1O43463 412 aa5.5□□□□□ -1.53
DEPDC1-204ENST00000489862 TIAF1O95411 115 aa5.5□□□□□ -1.53
DEPDC1-204ENST00000489862 TMEM253P0C7T8 217 aa5.5□□□□□ -1.53
DEPDC1-204ENST00000489862 EPHA1P21709 976 aa5.5□□□□□ -1.53
DEPDC1-204ENST00000489862 MPSTP25325 297 aa5.5□□□□□ -1.53
DEPDC1-204ENST00000489862 DNM1Q05193 864 aaKnown RBP5.5□□□□□ -1.53
DEPDC1-204ENST00000489862 HYAL2Q12891 473 aa5.5□□□□□ -1.53
DEPDC1-204ENST00000489862 MAP7Q14244 749 aa5.5□□□□□ -1.53
DEPDC1-204ENST00000489862 CDPF1Q6NVV7 123 aa5.5□□□□□ -1.53
DEPDC1-204ENST00000489862 ZNF765Q7L2R6 523 aa5.5□□□□□ -1.53
DEPDC1-204ENST00000489862 GATA6Q92908 595 aa5.5□□□□□ -1.53
DEPDC1-204ENST00000489862 ELP3Q9H9T3 547 aa5.5□□□□□ -1.53
DEPDC1-204ENST00000489862 PARD6AQ9NPB6 346 aa5.5□□□□□ -1.53
DEPDC1-204ENST00000489862 VAV3Q9UKW4 847 aa5.5□□□□□ -1.53
DEPDC1-204ENST00000489862 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.5□□□□□ -1.53
DEPDC1-204ENST00000489862 EIF1AXP47813 144 aaKnown RBP5.49□□□□□ -1.53
DEPDC1-204ENST00000489862 NOM1Q5C9Z4 860 aaKnown RBP5.49□□□□□ -1.53
DEPDC1-204ENST00000489862 PHLDB3Q6NSJ2 640 aa5.49□□□□□ -1.53
DEPDC1-204ENST00000489862 ADAMTSL4Q6UY14 1074 aa5.49□□□□□ -1.53
DEPDC1-204ENST00000489862 ZNF438Q7Z4V0 828 aa5.49□□□□□ -1.53
DEPDC1-204ENST00000489862 FBXO15Q8NCQ5 510 aaPredicted RBP5.49□□□□□ -1.53
DEPDC1-204ENST00000489862 RASSF4Q9H2L5 321 aa5.49□□□□□ -1.53
DEPDC1-204ENST00000489862 GGNBP2Q9H3C7 697 aa5.49□□□□□ -1.53
DEPDC1-204ENST00000489862 CNTN3Q9P232 1028 aa5.49□□□□□ -1.53
DEPDC1-204ENST00000489862 KIF4AO95239 1232 aa5.48□□□□□ -1.53
DEPDC1-204ENST00000489862 KCNA10Q16322 511 aa5.48□□□□□ -1.53
DEPDC1-204ENST00000489862 PDE12Q6L8Q7 609 aaKnown RBP5.48□□□□□ -1.53
DEPDC1-204ENST00000489862 MPZL3Q6UWV2 235 aa5.48□□□□□ -1.53
DEPDC1-204ENST00000489862 PRRT2Q7Z6L0 340 aaPredicted RBP5.48□□□□□ -1.53
DEPDC1-204ENST00000489862 LIN37Q96GY3 246 aaPredicted RBP5.48□□□□□ -1.53
DEPDC1-204ENST00000489862 SH2B1Q9NRF2 756 aaPredicted RBP5.48□□□□□ -1.53
DEPDC1-204ENST00000489862 KANSL3Q9P2N6 904 aa5.48□□□□□ -1.53
DEPDC1-204ENST00000489862 PDGFAP04085 211 aa5.48□□□□□ -1.53
DEPDC1-204ENST00000489862 C8orf34Q49A92 452 aa5.48□□□□□ -1.53
DEPDC1-204ENST00000489862 NCAPG2Q86XI2 1143 aa5.48□□□□□ -1.53
DEPDC1-204ENST00000489862 C1orf127Q8N9H9 656 aa5.48□□□□□ -1.53
DEPDC1-204ENST00000489862 TMPRSS13Q9BYE2 586 aa5.48□□□□□ -1.53
DEPDC1-204ENST00000489862 PRKCQQ04759 706 aa5.47□□□□□ -1.53
DEPDC1-204ENST00000489862 SLC23A3Q6PIS1 610 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms