RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 CARD6Q9BX69 1037 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 API5Q9BZZ5 524 aaKnown RBP5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 SCAND2PQ9GZW5 306 aaPredicted RBP5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 VEZTQ9HBM0 779 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 RABGEF1Q9UJ41 708 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 PALD1Q9ULE6 856 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 ZMIZ1Q9ULJ6 1067 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 LIMCH1Q9UPQ0 1083 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 MTMR6Q9Y217 621 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 USP16Q9Y5T5 823 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 ADGRB2O60241 1585 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 FRMPD1Q5SYB0 1578 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 TROQ12816 1431 aaPredicted RBP5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 PTCH1Q13635 1447 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 URI1O94763 535 aaPredicted RBP5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 ATG7O95352 703 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 GCFC2P16383 781 aaKnown RBP5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 SCP2P22307 547 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 ELF1P32519 619 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 SCNN1AP37088 669 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 TXLNAP40222 546 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 CRYMQ14894 314 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 GORABQ5T7V8 394 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 CCDC30Q5VVM6 783 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 TRIM65Q6PJ69 517 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 CWC27Q6UX04 472 aaKnown RBP5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 FAM71BQ8TC56 605 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 OTUD7AQ8TE49 926 aaPredicted RBP5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 FAXDC2Q96IV6 333 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 DNAJC25Q9H1X3 360 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 PDE11AQ9HCR9 933 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 DACT1Q9NYF0 836 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 KIAA1468Q9P260 1216 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 AKAP2Q9Y2D5 859 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 MSH6P52701 1360 aa5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 KDM5AP29375 1690 aaKnown RBP5.5□□□□□ -1.53
SNRNP40-206ENST00000489853 NPHP3Q7Z494 1330 aa5.49□□□□□ -1.53
SNRNP40-206ENST00000489853 CTAGE5O15320 804 aa5.49□□□□□ -1.53
SNRNP40-206ENST00000489853 VAMP4O75379 141 aa5.49□□□□□ -1.53
SNRNP40-206ENST00000489853 ERLIN1O75477 346 aa5.49□□□□□ -1.53
SNRNP40-206ENST00000489853 GNAI3P08754 354 aa5.49□□□□□ -1.53
SNRNP40-206ENST00000489853 USP5P45974 858 aa5.49□□□□□ -1.53
SNRNP40-206ENST00000489853 BCAMP50895 628 aa5.49□□□□□ -1.53
SNRNP40-206ENST00000489853 PSME1Q06323 249 aa5.49□□□□□ -1.53
SNRNP40-206ENST00000489853 TMEM164Q5U3C3 297 aa5.49□□□□□ -1.53
SNRNP40-206ENST00000489853 VPS53Q5VIR6 699 aa5.49□□□□□ -1.53
SNRNP40-206ENST00000489853 TTC6Q86TZ1 520 aa5.49□□□□□ -1.53
SNRNP40-206ENST00000489853 TEX11Q8IYF3 940 aa5.49□□□□□ -1.53
SNRNP40-206ENST00000489853 KAT2BQ92831 832 aa5.49□□□□□ -1.53
SNRNP40-206ENST00000489853 ZSCAN31Q96LW9 406 aaPredicted RBP5.49□□□□□ -1.53
SNRNP40-206ENST00000489853 UPF3BQ9BZI7 483 aaKnown RBP5.49□□□□□ -1.53
SNRNP40-206ENST00000489853 ACBD3Q9H3P7 528 aa5.49□□□□□ -1.53
SNRNP40-206ENST00000489853 MCM8Q9UJA3 840 aa5.49□□□□□ -1.53
SNRNP40-206ENST00000489853 YTHDC2Q9H6S0 1430 aaKnown RBP5.49□□□□□ -1.53
SNRNP40-206ENST00000489853 ATP10BO94823 1461 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 BECN2A8MW95 431 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 EXOC5O00471 708 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 MPHOSPH10O00566 681 aaKnown RBP5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 CHUKO15111 745 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 NEBLO76041 1014 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 TUBBP07437 444 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 GPTP24298 496 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 CHMLP26374 656 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 HSPA4P34932 840 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 PDE1AP54750 535 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 USP46P62068 366 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 GNAI1P63096 354 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 SCRN1Q12765 414 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 STX1AQ16623 288 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 HSP90B2PQ58FF3 399 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 BEND6Q5SZJ8 279 aaPredicted RBP5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 FCHSD1Q86WN1 690 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 DEPDC4Q8N2C3 294 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 PRPF38AQ8NAV1 312 aaKnown RBP5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 CTCFLQ8NI51 663 aaPredicted RBP5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 GOLGA1Q92805 767 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 CABS1Q96KC9 395 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 TTC14Q96N46 770 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 JPH2Q9BR39 696 aaPredicted RBP5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 SLAIN2Q9P270 581 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 FAN1Q9Y2M0 1017 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 PARP3Q9Y6F1 533 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 MADDQ8WXG6 1647 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 TRAPPC8Q9Y2L5 1435 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 TTC21AQ8NDW8 1320 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 ANKRD65E5RJM6 399 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 EBAG9O00559 213 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 ZSCAN12O43309 604 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 SFPQP23246 707 aaKnown RBP eCLIP5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 NF2P35240 595 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 RDXP35241 583 aaKnown RBP5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 MRPL12P52815 198 aaKnown RBP5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 ADCY2Q08462 1091 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 GRIK3Q13003 919 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 GNL2Q13823 731 aaKnown RBP5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 PREPLQ4J6C6 727 aaPredicted RBP5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 PLEKHO1Q53GL0 409 aaPredicted RBP5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 PHLDB3Q6NSJ2 640 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 KCNV1Q6PIU1 500 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 OTUD6BQ8N6M0 293 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms