RNA–Protein interactions for RNA: ENST00000489637.3

MVB12B-206, Transcript of multivesicular body subunit 12B, humanhuman

TSL 1 (best) BASIC

Gene MVB12B, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12B-206ENST00000489637 CHMP4CQ96CF2 233 aa17.92■□□□□ 0.46
MVB12B-206ENST00000489637 FAM84BQ96KN1 310 aaPredicted RBP17.92■□□□□ 0.46
MVB12B-206ENST00000489637 FTOQ9C0B1 505 aaKnown RBP eCLIP17.92■□□□□ 0.46
MVB12B-206ENST00000489637 CYP7A1P22680 504 aa17.91■□□□□ 0.46
MVB12B-206ENST00000489637 MAP3K12Q12852 859 aa17.91■□□□□ 0.46
MVB12B-206ENST00000489637 SF3B3Q15393 1217 aaKnown RBP17.91■□□□□ 0.46
MVB12B-206ENST00000489637 PDIA3P30101 505 aaKnown RBP17.91■□□□□ 0.46
MVB12B-206ENST00000489637 TTF1Q15361 905 aaPredicted RBP17.91■□□□□ 0.46
MVB12B-206ENST00000489637 SRCAPQ6ZRS2 3230 aa17.91■□□□□ 0.46
MVB12B-206ENST00000489637 UBE2Q2LH0YL09 131 aa17.9■□□□□ 0.46
MVB12B-206ENST00000489637 BSDC1Q9NW68 430 aaPredicted RBP17.9■□□□□ 0.46
MVB12B-206ENST00000489637 KLF18A0A0U1RQI7 1052 aa17.9■□□□□ 0.46
MVB12B-206ENST00000489637 MBD3O95983 291 aa17.9■□□□□ 0.46
MVB12B-206ENST00000489637 TM4SF1P30408 202 aa17.9■□□□□ 0.46
MVB12B-206ENST00000489637 LRRFIP1Q32MZ4 808 aaKnown RBP17.9■□□□□ 0.46
MVB12B-206ENST00000489637 RC3H1Q5TC82 1133 aaKnown RBP17.9■□□□□ 0.46
MVB12B-206ENST00000489637 SLC4A4Q9Y6R1 1079 aa17.9■□□□□ 0.46
MVB12B-206ENST00000489637 MINDY4BA8MYZ0 360 aa17.89■□□□□ 0.45
MVB12B-206ENST00000489637 RALYLQ86SE5 291 aaKnown RBP17.89■□□□□ 0.45
MVB12B-206ENST00000489637 PROM2Q8N271 834 aa17.89■□□□□ 0.45
MVB12B-206ENST00000489637 FAM184AQ8NB25 1140 aa17.89■□□□□ 0.45
MVB12B-206ENST00000489637 NEDD4P46934 1319 aa17.89■□□□□ 0.45
MVB12B-206ENST00000489637 PTPDC1A2A3K4 754 aa17.89■□□□□ 0.45
MVB12B-206ENST00000489637 UBE3CQ15386 1083 aa17.89■□□□□ 0.45
MVB12B-206ENST00000489637 KRT27Q7Z3Y8 459 aa17.89■□□□□ 0.45
MVB12B-206ENST00000489637 IFNL3Q8IZI9 196 aa17.89■□□□□ 0.45
MVB12B-206ENST00000489637 NSUN7Q8NE18 718 aaKnown RBP17.89■□□□□ 0.45
MVB12B-206ENST00000489637 RBSNQ9H1K0 784 aa17.89■□□□□ 0.45
MVB12B-206ENST00000489637 RRAGDQ9NQL2 400 aaPredicted RBP17.89■□□□□ 0.45
MVB12B-206ENST00000489637 ZSCAN25Q6NSZ9 544 aa17.88■□□□□ 0.45
MVB12B-206ENST00000489637 CCDC82Q8N4S0 544 aa17.88■□□□□ 0.45
MVB12B-206ENST00000489637 ZNF384Q8TF68 577 aa17.88■□□□□ 0.45
MVB12B-206ENST00000489637 ANKIB1Q9P2G1 1089 aa17.88■□□□□ 0.45
MVB12B-206ENST00000489637 CTNNA3Q9UI47 895 aa17.88■□□□□ 0.45
MVB12B-206ENST00000489637 COL5A3P25940 1745 aaPredicted RBP17.88■□□□□ 0.45
MVB12B-206ENST00000489637 GSG1L2A8MUP6 293 aa17.88■□□□□ 0.45
MVB12B-206ENST00000489637 H3BQV1 296 aa17.88■□□□□ 0.45
MVB12B-206ENST00000489637 IFFO2Q5TF58 517 aa17.88■□□□□ 0.45
MVB12B-206ENST00000489637 AIFM3Q96NN9 605 aa17.88■□□□□ 0.45
MVB12B-206ENST00000489637 BCL11BQ9C0K0 894 aaPredicted RBP17.88■□□□□ 0.45
MVB12B-206ENST00000489637 NAPBQ9H115 298 aa17.88■□□□□ 0.45
MVB12B-206ENST00000489637 LAMA4Q16363 1823 aa17.88■□□□□ 0.45
MVB12B-206ENST00000489637 MB21D2Q8IYB1 491 aaPredicted RBP17.87■□□□□ 0.45
MVB12B-206ENST00000489637 ZNF512BQ96KM6 892 aaPredicted RBP17.87■□□□□ 0.45
MVB12B-206ENST00000489637 GOLGA8BA8MQT2 603 aa17.87■□□□□ 0.45
MVB12B-206ENST00000489637 ADD1P35611 737 aaKnown RBP17.87■□□□□ 0.45
MVB12B-206ENST00000489637 TDO2P48775 406 aa17.87■□□□□ 0.45
MVB12B-206ENST00000489637 OLFM4Q6UX06 510 aa17.87■□□□□ 0.45
MVB12B-206ENST00000489637 CMTR1Q8N1G2 835 aaKnown RBP17.87■□□□□ 0.45
MVB12B-206ENST00000489637 ALDH8A1Q9H2A2 487 aaPredicted RBP17.87■□□□□ 0.45
MVB12B-206ENST00000489637 COL1A1P02452 1464 aaPredicted RBP17.87■□□□□ 0.45
MVB12B-206ENST00000489637 PFKFB2O60825 505 aa17.86■□□□□ 0.45
MVB12B-206ENST00000489637 PRDM1O75626 825 aa17.86■□□□□ 0.45
MVB12B-206ENST00000489637 PRDX5P30044 214 aa17.86■□□□□ 0.45
MVB12B-206ENST00000489637 NASPP49321 788 aaPredicted RBP17.86■□□□□ 0.45
MVB12B-206ENST00000489637 CAVIN4Q5BKX8 364 aa17.86■□□□□ 0.45
MVB12B-206ENST00000489637 TTC6Q86TZ1 520 aa17.86■□□□□ 0.45
MVB12B-206ENST00000489637 CNBD1Q8NA66 436 aa17.86■□□□□ 0.45
MVB12B-206ENST00000489637 TMEM87AQ8NBN3 555 aa17.86■□□□□ 0.45
MVB12B-206ENST00000489637 NCOA7Q8NI08 942 aa17.86■□□□□ 0.45
MVB12B-206ENST00000489637 SLC10A5Q5PT55 438 aa17.86■□□□□ 0.45
MVB12B-206ENST00000489637 NYXQ9GZU5 481 aa17.86■□□□□ 0.45
MVB12B-206ENST00000489637 ONECUT3O60422 494 aaPredicted RBP17.85■□□□□ 0.45
MVB12B-206ENST00000489637 GYS1P13807 737 aa17.85■□□□□ 0.45
MVB12B-206ENST00000489637 MCM5P33992 734 aa17.85■□□□□ 0.45
MVB12B-206ENST00000489637 PATL2C9JE40 543 aaKnown RBP17.85■□□□□ 0.45
MVB12B-206ENST00000489637 HMGB1P09429 215 aaKnown RBP17.85■□□□□ 0.45
MVB12B-206ENST00000489637 GRIK5Q16478 980 aa17.85■□□□□ 0.45
MVB12B-206ENST00000489637 MSL1Q68DK7 614 aa17.85■□□□□ 0.45
MVB12B-206ENST00000489637 PRR5LQ6MZQ0 368 aa17.85■□□□□ 0.45
MVB12B-206ENST00000489637 MICU3Q86XE3 530 aa17.85■□□□□ 0.45
MVB12B-206ENST00000489637 PPP1R9BQ96SB3 815 aa17.85■□□□□ 0.45
MVB12B-206ENST00000489637 FDPSP14324 419 aaKnown RBP17.85■□□□□ 0.45
MVB12B-206ENST00000489637 HPS5Q9UPZ3 1129 aa17.85■□□□□ 0.45
MVB12B-206ENST00000489637 TRDNQ13061 729 aa17.84■□□□□ 0.45
MVB12B-206ENST00000489637 CAMK4Q16566 473 aa17.84■□□□□ 0.45
MVB12B-206ENST00000489637 MPNDQ8N594 471 aa17.84■□□□□ 0.45
MVB12B-206ENST00000489637 PHKBQ93100 1093 aa17.84■□□□□ 0.45
MVB12B-206ENST00000489637 ZSWIM5Q9P217 1185 aa17.84■□□□□ 0.45
MVB12B-206ENST00000489637 AATFQ9NY61 560 aaKnown RBP eCLIP17.84■□□□□ 0.45
MVB12B-206ENST00000489637 CCDC173Q0VFZ6 552 aa17.83■□□□□ 0.44
MVB12B-206ENST00000489637 UBE4AQ14139 1066 aa17.83■□□□□ 0.44
MVB12B-206ENST00000489637 GIMAP6Q6P9H5 292 aa17.83■□□□□ 0.44
MVB12B-206ENST00000489637 LRSAM1Q6UWE0 723 aa17.83■□□□□ 0.44
MVB12B-206ENST00000489637 NFXL1Q6ZNB6 911 aa17.83■□□□□ 0.44
MVB12B-206ENST00000489637 TICAM2Q86XR7 235 aa17.83■□□□□ 0.44
MVB12B-206ENST00000489637 ATRNO75882 1429 aa17.83■□□□□ 0.44
MVB12B-206ENST00000489637 SERPINB2P05120 415 aa17.83■□□□□ 0.44
MVB12B-206ENST00000489637 HIBADHP31937 336 aaKnown RBP17.83■□□□□ 0.44
MVB12B-206ENST00000489637 RREB1Q92766 1687 aa17.83■□□□□ 0.44
MVB12B-206ENST00000489637 CARMIL3Q8ND23 1372 aa17.82■□□□□ 0.44
MVB12B-206ENST00000489637 ZNF804BA4D1E1 1349 aa17.82■□□□□ 0.44
MVB12B-206ENST00000489637 POLR3DP05423 398 aaPredicted RBP17.82■□□□□ 0.44
MVB12B-206ENST00000489637 TXNRD1Q16881 649 aa17.82■□□□□ 0.44
MVB12B-206ENST00000489637 THSD7AQ9UPZ6 1657 aa17.82■□□□□ 0.44
MVB12B-206ENST00000489637 LIG1P18858 919 aa17.82■□□□□ 0.44
MVB12B-206ENST00000489637 CDC27P30260 824 aa17.82■□□□□ 0.44
MVB12B-206ENST00000489637 DDR1Q08345 913 aa17.82■□□□□ 0.44
MVB12B-206ENST00000489637 MAGEB6P1A0A0J9YX57 407 aa17.81■□□□□ 0.44
MVB12B-206ENST00000489637 MECOMQ03112 1051 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms