RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 BRD1O95696 1058 aa15.78■□□□□ 0.12
CHD1L-208ENST00000488864 KBTBD3Q8NAB2 608 aa15.78■□□□□ 0.12
CHD1L-208ENST00000488864 FAM227BQ96M60 508 aa15.78■□□□□ 0.12
CHD1L-208ENST00000488864 DIAPH3Q9NSV4 1193 aa15.78■□□□□ 0.12
CHD1L-208ENST00000488864 GNL3LQ9NVN8 582 aaKnown RBP15.78■□□□□ 0.12
CHD1L-208ENST00000488864 CD2APQ9Y5K6 639 aa15.78■□□□□ 0.12
CHD1L-208ENST00000488864 LRRC37AA6NMS7 1700 aa15.78■□□□□ 0.12
CHD1L-208ENST00000488864 KIF13BQ9NQT8 1826 aa15.78■□□□□ 0.12
CHD1L-208ENST00000488864 AKAP11Q9UKA4 1901 aa15.78■□□□□ 0.12
CHD1L-208ENST00000488864 CHAF1AQ13111 956 aaPredicted RBP15.78■□□□□ 0.12
CHD1L-208ENST00000488864 NOL8Q76FK4 1167 aaKnown RBP15.78■□□□□ 0.12
CHD1L-208ENST00000488864 PIH1D3Q9NQM4 214 aaKnown RBP15.78■□□□□ 0.12
CHD1L-208ENST00000488864 DYNC1I1O14576 645 aa15.77■□□□□ 0.12
CHD1L-208ENST00000488864 IDH1O75874 414 aaKnown RBP15.77■□□□□ 0.12
CHD1L-208ENST00000488864 MBD3O95983 291 aa15.77■□□□□ 0.12
CHD1L-208ENST00000488864 WASHC4Q2M389 1173 aa15.77■□□□□ 0.12
CHD1L-208ENST00000488864 SASS6Q6UVJ0 657 aa15.77■□□□□ 0.12
CHD1L-208ENST00000488864 COL1A1P02452 1464 aaPredicted RBP15.77■□□□□ 0.12
CHD1L-208ENST00000488864 ZC3H12CQ9C0D7 883 aaKnown RBP15.77■□□□□ 0.11
CHD1L-208ENST00000488864 TSPY26PQ9H489 355 aa15.77■□□□□ 0.11
CHD1L-208ENST00000488864 ABCF2Q9UG63 623 aa15.77■□□□□ 0.11
CHD1L-208ENST00000488864 PALD1Q9ULE6 856 aa15.77■□□□□ 0.11
CHD1L-208ENST00000488864 BCS1LQ9Y276 419 aa15.77■□□□□ 0.11
CHD1L-208ENST00000488864 DUOX1Q9NRD9 1551 aa15.77■□□□□ 0.11
CHD1L-208ENST00000488864 DOK7Q18PE1 504 aa15.76■□□□□ 0.11
CHD1L-208ENST00000488864 FOXD4L6Q3SYB3 417 aaPredicted RBP15.76■□□□□ 0.11
CHD1L-208ENST00000488864 DALRD3Q5D0E6 543 aaKnown RBP15.76■□□□□ 0.11
CHD1L-208ENST00000488864 FOXD4L3Q6VB84 417 aaPredicted RBP15.76■□□□□ 0.11
CHD1L-208ENST00000488864 ZNF804AQ7Z570 1209 aa15.76■□□□□ 0.11
CHD1L-208ENST00000488864 FHDC1Q9C0D6 1143 aaPredicted RBP15.76■□□□□ 0.11
CHD1L-208ENST00000488864 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.76■□□□□ 0.11
CHD1L-208ENST00000488864 A0A0D9SFI3 127 aa15.76■□□□□ 0.11
CHD1L-208ENST00000488864 GADD45BO75293 160 aaPredicted RBP15.76■□□□□ 0.11
CHD1L-208ENST00000488864 NMIQ13287 307 aaPredicted RBP15.76■□□□□ 0.11
CHD1L-208ENST00000488864 ESYT1Q9BSJ8 1104 aa15.76■□□□□ 0.11
CHD1L-208ENST00000488864 CD209Q9NNX6 404 aa15.76■□□□□ 0.11
CHD1L-208ENST00000488864 CUL4AQ13619 759 aa15.75■□□□□ 0.11
CHD1L-208ENST00000488864 SEC62Q99442 399 aaKnown RBP15.75■□□□□ 0.11
CHD1L-208ENST00000488864 GDPD2Q9HCC8 539 aa15.75■□□□□ 0.11
CHD1L-208ENST00000488864 LTBP1Q14766 1721 aa15.75■□□□□ 0.11
CHD1L-208ENST00000488864 MED23Q9ULK4 1368 aa15.75■□□□□ 0.11
CHD1L-208ENST00000488864 PTMAP06454 111 aaKnown RBP15.75■□□□□ 0.11
CHD1L-208ENST00000488864 DENND2AQ9ULE3 1009 aa15.75■□□□□ 0.11
CHD1L-208ENST00000488864 DLEC1Q9Y238 1755 aa15.75■□□□□ 0.11
CHD1L-208ENST00000488864 KIAA1551Q9HCM1 1747 aa15.74■□□□□ 0.11
CHD1L-208ENST00000488864 CCDC93Q567U6 631 aa15.74■□□□□ 0.11
CHD1L-208ENST00000488864 C15orf52Q6ZUT6 534 aaKnown RBP15.74■□□□□ 0.11
CHD1L-208ENST00000488864 DBNDD1Q9H9R9 158 aa15.74■□□□□ 0.11
CHD1L-208ENST00000488864 AOC3Q16853 763 aa15.74■□□□□ 0.11
CHD1L-208ENST00000488864 TDRD7Q8NHU6 1098 aaKnown RBP15.74■□□□□ 0.11
CHD1L-208ENST00000488864 ZNF830Q96NB3 372 aaPredicted RBP15.74■□□□□ 0.11
CHD1L-208ENST00000488864 LRP2BPQ9P2M1 347 aa15.74■□□□□ 0.11
CHD1L-208ENST00000488864 G3V3G9 751 aa15.73■□□□□ 0.11
CHD1L-208ENST00000488864 TTF1Q15361 905 aaPredicted RBP15.73■□□□□ 0.11
CHD1L-208ENST00000488864 SLC9C2Q5TAH2 1124 aa15.73■□□□□ 0.11
CHD1L-208ENST00000488864 DCAF8Q5TAQ9 597 aa15.73■□□□□ 0.11
CHD1L-208ENST00000488864 CCDC129Q6ZRS4 1044 aa15.73■□□□□ 0.11
CHD1L-208ENST00000488864 MYO5AQ9Y4I1 1855 aaKnown RBP15.73■□□□□ 0.11
CHD1L-208ENST00000488864 FBXW7Q969H0 707 aa15.73■□□□□ 0.11
CHD1L-208ENST00000488864 ANO2Q9NQ90 1003 aa15.73■□□□□ 0.11
CHD1L-208ENST00000488864 ZNF277Q9NRM2 450 aaPredicted RBP15.73■□□□□ 0.11
CHD1L-208ENST00000488864 SNED1Q8TER0 1413 aa15.72■□□□□ 0.11
CHD1L-208ENST00000488864 SGSM2O43147 1006 aa15.72■□□□□ 0.11
CHD1L-208ENST00000488864 KIAA2012Q0VF49 1180 aa15.72■□□□□ 0.11
CHD1L-208ENST00000488864 CC2D2BQ6DHV5 1058 aa15.72■□□□□ 0.11
CHD1L-208ENST00000488864 ZNF589Q86UQ0 364 aaPredicted RBP15.72■□□□□ 0.11
CHD1L-208ENST00000488864 EYA3Q99504 573 aa15.72■□□□□ 0.11
CHD1L-208ENST00000488864 KCNQ5Q9NR82 932 aa15.72■□□□□ 0.11
CHD1L-208ENST00000488864 RNF113AO15541 343 aaKnown RBP15.72■□□□□ 0.11
CHD1L-208ENST00000488864 PRDX5P30044 214 aa15.72■□□□□ 0.11
CHD1L-208ENST00000488864 RTFDC1Q9BY42 306 aaPredicted RBP15.72■□□□□ 0.11
CHD1L-208ENST00000488864 RAI14Q9P0K7 980 aa15.72■□□□□ 0.11
CHD1L-208ENST00000488864 HIP1O00291 1037 aa15.71■□□□□ 0.11
CHD1L-208ENST00000488864 SEMA3EO15041 775 aa15.71■□□□□ 0.11
CHD1L-208ENST00000488864 PPIP5K2O43314 1243 aa15.71■□□□□ 0.11
CHD1L-208ENST00000488864 IL1R1P14778 569 aa15.71■□□□□ 0.11
CHD1L-208ENST00000488864 MCM2P49736 904 aa15.71■□□□□ 0.11
CHD1L-208ENST00000488864 RTKN2Q8IZC4 609 aa15.71■□□□□ 0.11
CHD1L-208ENST00000488864 MAGEB6Q8N7X4 407 aa15.71■□□□□ 0.11
CHD1L-208ENST00000488864 TSC1Q92574 1164 aa15.71■□□□□ 0.11
CHD1L-208ENST00000488864 GTF2IP78347 998 aa15.7■□□□□ 0.1
CHD1L-208ENST00000488864 USP48Q86UV5 1035 aa15.7■□□□□ 0.1
CHD1L-208ENST00000488864 RUFY2Q8WXA3 655 aa15.7■□□□□ 0.1
CHD1L-208ENST00000488864 OSBP2Q969R2 916 aa15.7■□□□□ 0.1
CHD1L-208ENST00000488864 SYT17Q9BSW7 474 aa15.7■□□□□ 0.1
CHD1L-208ENST00000488864 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.7■□□□□ 0.15e-7■■■□□ 15.8
CHD1L-208ENST00000488864 COA1Q9GZY4 146 aa15.7■□□□□ 0.1
CHD1L-208ENST00000488864 PDE6AP16499 860 aa15.7■□□□□ 0.1
CHD1L-208ENST00000488864 MAP3K12Q12852 859 aa15.7■□□□□ 0.1
CHD1L-208ENST00000488864 GRIK5Q16478 980 aa15.7■□□□□ 0.1
CHD1L-208ENST00000488864 PUS7LQ9H0K6 701 aaKnown RBP15.7■□□□□ 0.1
CHD1L-208ENST00000488864 ZNF532Q9HCE3 1301 aa15.7■□□□□ 0.1
CHD1L-208ENST00000488864 ADD2P35612 726 aa15.69■□□□□ 0.1
CHD1L-208ENST00000488864 MTERF4Q7Z6M4 381 aaKnown RBP15.69■□□□□ 0.1
CHD1L-208ENST00000488864 C17orf53Q8N3J3 647 aaPredicted RBP15.69■□□□□ 0.1
CHD1L-208ENST00000488864 MXD3Q9BW11 206 aa15.69■□□□□ 0.1
CHD1L-208ENST00000488864 UPF3BQ9BZI7 483 aaKnown RBP15.69■□□□□ 0.1
CHD1L-208ENST00000488864 PRDM10Q9NQV6 1147 aa15.69■□□□□ 0.1
CHD1L-208ENST00000488864 CHD4Q14839 1912 aa15.69■□□□□ 0.1
CHD1L-208ENST00000488864 SOCS7O14512 581 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms