RNA–Protein interactions for RNA: ENST00000488741.5

CREM-238, Transcript of cAMP responsive element modulator, human

TSL 2 BASIC

Gene CREM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CREM-238	ENST00000488741	NUDT16	Q96DE0	195 aa	Known RBP	5.99	□□□□□ -1.45
CREM-238	ENST00000488741	USP44	Q9H0E7	712 aa		5.99	□□□□□ -1.45
CREM-238	ENST00000488741	DNAJC25	Q9H1X3	360 aa		5.99	□□□□□ -1.45
CREM-238	ENST00000488741	VRTN	Q9H8Y1	702 aa		5.99	□□□□□ -1.45
CREM-238	ENST00000488741	IL1RAPL2	Q9NP60	686 aa		5.99	□□□□□ -1.45
CREM-238	ENST00000488741	CWC15	Q9P013	229 aa	Known RBP	5.99	□□□□□ -1.45
CREM-238	ENST00000488741	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	5.99	□□□□□ -1.45
CREM-238	ENST00000488741		V9GYY5	206 aa	Predicted RBP	5.99	□□□□□ -1.45
CREM-238	ENST00000488741	RICTOR	Q6R327	1708 aa		5.99	□□□□□ -1.45
CREM-238	ENST00000488741	PEAK1	Q9H792	1746 aa		5.99	□□□□□ -1.45
CREM-238	ENST00000488741	PHLPP2	Q6ZVD8	1323 aa		5.99	□□□□□ -1.45
CREM-238	ENST00000488741	JCAD	Q9P266	1359 aa		5.98	□□□□□ -1.45
CREM-238	ENST00000488741	ATP9B	O43861	1147 aa		5.98	□□□□□ -1.45
CREM-238	ENST00000488741	ATG7	O95352	703 aa		5.98	□□□□□ -1.45
CREM-238	ENST00000488741	HOXB7	P09629	217 aa		5.98	□□□□□ -1.45
CREM-238	ENST00000488741	RPS6KB1	P23443	525 aa		5.98	□□□□□ -1.45
CREM-238	ENST00000488741	KCNA1	Q09470	495 aa		5.98	□□□□□ -1.45
CREM-238	ENST00000488741	REST	Q13127	1097 aa		5.98	□□□□□ -1.45
CREM-238	ENST00000488741	NR1H3	Q13133	447 aa		5.98	□□□□□ -1.45
CREM-238	ENST00000488741	MTX1	Q13505	466 aa		5.98	□□□□□ -1.45
CREM-238	ENST00000488741	NAA30	Q147X3	362 aa	Predicted RBP	5.98	□□□□□ -1.45
CREM-238	ENST00000488741	CCDC93	Q567U6	631 aa		5.98	□□□□□ -1.45
CREM-238	ENST00000488741	CREB3L3	Q68CJ9	461 aa		5.98	□□□□□ -1.45
CREM-238	ENST00000488741	PRPF40B	Q6NWY9	871 aa	Known RBP	5.98	□□□□□ -1.45
CREM-238	ENST00000488741	CTR9	Q6PD62	1173 aa		5.98	□□□□□ -1.45
CREM-238	ENST00000488741	TMCO3	Q6UWJ1	677 aa		5.98	□□□□□ -1.45
CREM-238	ENST00000488741	CCDC73	Q6ZRK6	1079 aa		5.98	□□□□□ -1.45
CREM-238	ENST00000488741	PPP1R42	Q7Z4L9	355 aa		5.98	□□□□□ -1.45
CREM-238	ENST00000488741	FCHSD1	Q86WN1	690 aa		5.98	□□□□□ -1.45
CREM-238	ENST00000488741	CEP57L1	Q8IYX8	460 aa		5.98	□□□□□ -1.45
CREM-238	ENST00000488741	CLASRP	Q8N2M8	674 aa	Known RBP	5.98	□□□□□ -1.45
CREM-238	ENST00000488741	MAP4K1	Q92918	833 aa		5.98	□□□□□ -1.45
CREM-238	ENST00000488741	ZNF396	Q96N95	335 aa	Predicted RBP	5.98	□□□□□ -1.45
CREM-238	ENST00000488741	BPIFA3	Q9BQP9	254 aa		5.98	□□□□□ -1.45
CREM-238	ENST00000488741	EFCC1	Q9HA90	598 aa		5.98	□□□□□ -1.45
CREM-238	ENST00000488741	ECHDC1	Q9NTX5	307 aa		5.98	□□□□□ -1.45
CREM-238	ENST00000488741	TPCN1	Q9ULQ1	816 aa		5.98	□□□□□ -1.45
CREM-238	ENST00000488741	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	5.98	□□□□□ -1.45
CREM-238	ENST00000488741	RBM8A	Q9Y5S9	174 aa	Known RBP	5.98	□□□□□ -1.45
CREM-238	ENST00000488741	DIP2A	Q14689	1571 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741	MYH15	Q9Y2K3	1946 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741	SBNO1	A3KN83	1393 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741	FLT4	P35916	1363 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741	RFX7	Q2KHR2	1363 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741	SLC27A2	O14975	620 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741	MYO1B	O43795	1136 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741	NR1I2	O75469	434 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741	ZRANB2	O95218	330 aa	Known RBP eCLIP	5.97	□□□□□ -1.45
CREM-238	ENST00000488741	PNMA6A	P0CW24	399 aa	Predicted RBP	5.97	□□□□□ -1.45
CREM-238	ENST00000488741	SOX11	P35716	441 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741	PTH1R	Q03431	593 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741		Q3C1V9	767 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741	ADCK5	Q3MIX3	580 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741	CCDC158	Q5M9N0	1113 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741	NAA16	Q6N069	864 aa	Predicted RBP	5.97	□□□□□ -1.45
CREM-238	ENST00000488741	WAPL	Q7Z5K2	1190 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741	LAPTM4B	Q86VI4	370 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741	FAM174A	Q8TBP5	190 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741	UBXN4	Q92575	508 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741	LRCH3	Q96II8	777 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741	PGBD1	Q96JS3	809 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741	LLPH	Q9BRT6	129 aa	Known RBP	5.97	□□□□□ -1.45
CREM-238	ENST00000488741	NBPF3	Q9H094	633 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	5.97	□□□□□ -1.45
CREM-238	ENST00000488741	PSD3	Q9NYI0	1048 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741	RCOR1	Q9UKL0	485 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741	SPG7	Q9UQ90	795 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741	FHOD1	Q9Y613	1164 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741	PTPRU	Q92729	1446 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741	IGSF1	Q8N6C5	1336 aa		5.97	□□□□□ -1.45
CREM-238	ENST00000488741	NRXN3	Q9Y4C0	1643 aa		5.96	□□□□□ -1.45
CREM-238	ENST00000488741	GOLGA6L9	A6NEM1	432 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741	USP27X	A6NNY8	438 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741	ZBBX	A8MT70	800 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741	EFCAB8	A8MWE9	144 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741		H3BQV1	296 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741	SRGAP3	O43295	1099 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741	KIN	O60870	393 aa	Known RBP	5.96	□□□□□ -1.46
CREM-238	ENST00000488741	MAP4K4	O95819	1239 aa	Predicted RBP	5.96	□□□□□ -1.46
CREM-238	ENST00000488741	IFIT2	P09913	472 aa	Known RBP	5.96	□□□□□ -1.46
CREM-238	ENST00000488741	SKI	P12755	728 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741	CTH	P32929	405 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741	PLA2G4A	P47712	749 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741	BCAM	P50895	628 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741	APLP1	P51693	650 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741	HNRNPH2	P55795	449 aa	Known RBP	5.96	□□□□□ -1.46
CREM-238	ENST00000488741	OS9	Q13438	667 aa	Predicted RBP	5.96	□□□□□ -1.46
CREM-238	ENST00000488741	MTHFSD	Q2M296	383 aa	Known RBP	5.96	□□□□□ -1.46
CREM-238	ENST00000488741	IFFO2	Q5TF58	517 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741	JAKMIP3	Q5VZ66	844 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741	LARP1	Q6PKG0	1096 aa	Known RBP	5.96	□□□□□ -1.46
CREM-238	ENST00000488741	BRICD5	Q6PL45	260 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741	C11orf57	Q6ZUT1	292 aa	Predicted RBP	5.96	□□□□□ -1.46
CREM-238	ENST00000488741	FERMT3	Q86UX7	667 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741	CCAR1	Q8IX12	1150 aa	Known RBP	5.96	□□□□□ -1.46
CREM-238	ENST00000488741	DHX40	Q8IX18	779 aa	Known RBP	5.96	□□□□□ -1.46
CREM-238	ENST00000488741	MSL3	Q8N5Y2	521 aa	Known RBP	5.96	□□□□□ -1.46
CREM-238	ENST00000488741	NECAB1	Q8N987	351 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741	PNMA1	Q8ND90	353 aa		5.96	□□□□□ -1.46
CREM-238	ENST00000488741	MNS1	Q8NEH6	495 aa		5.96	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 696.8 ms