RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 ZC3H12CQ9C0D7 883 aaKnown RBP8.54□□□□□ -1.04
VPS8-224ENST00000488255 CYP11A1P05108 521 aa8.53□□□□□ -1.04
VPS8-224ENST00000488255 CTSBP07858 339 aa8.53□□□□□ -1.04
VPS8-224ENST00000488255 PTPN12Q05209 780 aaKnown RBP8.53□□□□□ -1.04
VPS8-224ENST00000488255 Q6ZS46 218 aa8.53□□□□□ -1.04
VPS8-224ENST00000488255 UTP4Q969X6 686 aaKnown RBP8.53□□□□□ -1.04
VPS8-224ENST00000488255 TRIM56Q9BRZ2 755 aaKnown RBP8.53□□□□□ -1.04
VPS8-224ENST00000488255 RNF19AQ9NV58 838 aa8.53□□□□□ -1.04
VPS8-224ENST00000488255 SPG7Q9UQ90 795 aa8.53□□□□□ -1.04
VPS8-224ENST00000488255 ZBTB7CA1YPR0 619 aa8.52□□□□□ -1.05
VPS8-224ENST00000488255 FBXO24O75426 580 aa8.52□□□□□ -1.05
VPS8-224ENST00000488255 DRD2P14416 443 aa8.52□□□□□ -1.05
VPS8-224ENST00000488255 PREPP48147 710 aa8.52□□□□□ -1.05
VPS8-224ENST00000488255 PDE3AQ14432 1141 aa8.52□□□□□ -1.05
VPS8-224ENST00000488255 ANKRD34AQ69YU3 496 aa8.52□□□□□ -1.05
VPS8-224ENST00000488255 GAS2O43903 313 aaKnown RBP8.51□□□□□ -1.05
VPS8-224ENST00000488255 H2AFB1P0C5Y9 115 aa8.51□□□□□ -1.05
VPS8-224ENST00000488255 H2AFB2P0C5Z0 115 aa8.51□□□□□ -1.05
VPS8-224ENST00000488255 RPS26P11Q5JNZ5 115 aaPredicted RBP8.51□□□□□ -1.05
VPS8-224ENST00000488255 TPTE2Q6XPS3 522 aa8.51□□□□□ -1.05
VPS8-224ENST00000488255 DNAJC14Q6Y2X3 702 aaPredicted RBP8.51□□□□□ -1.05
VPS8-224ENST00000488255 ARMC10Q8N2F6 343 aa8.51□□□□□ -1.05
VPS8-224ENST00000488255 DUSP9Q99956 384 aaKnown RBP8.51□□□□□ -1.05
VPS8-224ENST00000488255 TMPRSS13Q9BYE2 586 aa8.51□□□□□ -1.05
VPS8-224ENST00000488255 NRSN2Q9GZP1 204 aa8.51□□□□□ -1.05
VPS8-224ENST00000488255 CYP4F12Q9HCS2 524 aa8.51□□□□□ -1.05
VPS8-224ENST00000488255 RAD18Q9NS91 495 aa8.51□□□□□ -1.05
VPS8-224ENST00000488255 DHX15O43143 795 aaKnown RBP8.5□□□□□ -1.05
VPS8-224ENST00000488255 XRCC5P13010 732 aaKnown RBP8.5□□□□□ -1.05
VPS8-224ENST00000488255 GSTT1P30711 240 aa8.5□□□□□ -1.05
VPS8-224ENST00000488255 PRSS36Q5K4E3 855 aa8.5□□□□□ -1.05
VPS8-224ENST00000488255 EXOSC6Q5RKV6 272 aaKnown RBP8.5□□□□□ -1.05
VPS8-224ENST00000488255 PRR23CQ6ZRP0 262 aa8.5□□□□□ -1.05
VPS8-224ENST00000488255 NPAS4Q8IUM7 802 aa8.5□□□□□ -1.05
VPS8-224ENST00000488255 FAM46AQ96IP4 442 aaKnown RBP8.5□□□□□ -1.05
VPS8-224ENST00000488255 KCNF1Q9H3M0 494 aa8.5□□□□□ -1.05
VPS8-224ENST00000488255 TMEM39AQ9NV64 488 aa8.5□□□□□ -1.05
VPS8-224ENST00000488255 MEGF11A6BM72 1044 aa8.49□□□□□ -1.05
VPS8-224ENST00000488255 PRPF40AO75400 957 aaKnown RBP8.49□□□□□ -1.05
VPS8-224ENST00000488255 USP17L7P0C7H9 530 aa8.49□□□□□ -1.05
VPS8-224ENST00000488255 BMP3P12645 472 aa8.49□□□□□ -1.05
VPS8-224ENST00000488255 ITGB7P26010 798 aa8.49□□□□□ -1.05
VPS8-224ENST00000488255 PPP2R3AQ06190 1150 aa8.49□□□□□ -1.05
VPS8-224ENST00000488255 AKAP4Q5JQC9 854 aa8.49□□□□□ -1.05
VPS8-224ENST00000488255 C3orf58Q8NDZ4 430 aa8.49□□□□□ -1.05
VPS8-224ENST00000488255 C12orf49Q9H741 205 aa8.49□□□□□ -1.05
VPS8-224ENST00000488255 ZFYVE1Q9HBF4 777 aa8.49□□□□□ -1.05
VPS8-224ENST00000488255 EIF4EBP3O60516 100 aaPredicted RBP8.48□□□□□ -1.05
VPS8-224ENST00000488255 RXRBP28702 533 aa8.48□□□□□ -1.05
VPS8-224ENST00000488255 AP3B2Q13367 1082 aa8.48□□□□□ -1.05
VPS8-224ENST00000488255 STOML1Q9UBI4 398 aa8.48□□□□□ -1.05
VPS8-224ENST00000488255 RAXQ9Y2V3 346 aa8.48□□□□□ -1.05
VPS8-224ENST00000488255 GIPC1O14908 333 aa8.47□□□□□ -1.05
VPS8-224ENST00000488255 LIG1P18858 919 aa8.47□□□□□ -1.05
VPS8-224ENST00000488255 GNA15P30679 374 aa8.47□□□□□ -1.05
VPS8-224ENST00000488255 TAGLNQ01995 201 aaKnown RBP8.47□□□□□ -1.05
VPS8-224ENST00000488255 SMG8Q8ND04 991 aaKnown RBP8.47□□□□□ -1.05
VPS8-224ENST00000488255 KCNB2Q92953 911 aa8.47□□□□□ -1.05
VPS8-224ENST00000488255 MYRFLQ96LU7 910 aa8.47□□□□□ -1.05
VPS8-224ENST00000488255 SRCIN1Q9C0H9 1055 aa8.47□□□□□ -1.05
VPS8-224ENST00000488255 CBX8Q9HC52 389 aa8.47□□□□□ -1.05
VPS8-224ENST00000488255 EIF4BP23588 611 aaKnown RBP8.46□□□□□ -1.06
VPS8-224ENST00000488255 USP11P51784 963 aa8.46□□□□□ -1.06
VPS8-224ENST00000488255 COL19A1Q14993 1142 aa8.46□□□□□ -1.06
VPS8-224ENST00000488255 UVSSAQ2YD98 709 aa8.46□□□□□ -1.06
VPS8-224ENST00000488255 SGO2Q562F6 1265 aa8.46□□□□□ -1.06
VPS8-224ENST00000488255 DYMQ7RTS9 669 aa8.46□□□□□ -1.06
VPS8-224ENST00000488255 STK35Q8TDR2 534 aa8.46□□□□□ -1.06
VPS8-224ENST00000488255 FAM161BQ96MY7 647 aa8.46□□□□□ -1.06
VPS8-224ENST00000488255 CCDC86Q9H6F5 360 aaKnown RBP8.46□□□□□ -1.06
VPS8-224ENST00000488255 FAM8A1Q9UBU6 413 aa8.46□□□□□ -1.06
VPS8-224ENST00000488255 PARP2Q9UGN5 583 aa8.46□□□□□ -1.06
VPS8-224ENST00000488255 AP4E1Q9UPM8 1137 aa8.46□□□□□ -1.06
VPS8-224ENST00000488255 HMX2A2RU54 273 aa8.45□□□□□ -1.06
VPS8-224ENST00000488255 XPCQ01831 940 aaPredicted RBP8.45□□□□□ -1.06
VPS8-224ENST00000488255 SOX4Q06945 474 aaPredicted RBP8.45□□□□□ -1.06
VPS8-224ENST00000488255 HP1BP3Q5SSJ5 553 aaPredicted RBP8.45□□□□□ -1.06
VPS8-224ENST00000488255 TMCO4Q5TGY1 634 aa8.45□□□□□ -1.06
VPS8-224ENST00000488255 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.45□□□□□ -1.06
VPS8-224ENST00000488255 BEND4Q6ZU67 534 aa8.45□□□□□ -1.06
VPS8-224ENST00000488255 SULF2Q8IWU5 870 aa8.45□□□□□ -1.06
VPS8-224ENST00000488255 TRIM42Q8IWZ5 723 aa8.45□□□□□ -1.06
VPS8-224ENST00000488255 FAM20CQ8IXL6 584 aa8.45□□□□□ -1.06
VPS8-224ENST00000488255 SUGCTQ9HAC7 445 aa8.45□□□□□ -1.06
VPS8-224ENST00000488255 TTF2Q9UNY4 1162 aaKnown RBP8.45□□□□□ -1.06
VPS8-224ENST00000488255 TIAF1O95411 115 aa8.44□□□□□ -1.06
VPS8-224ENST00000488255 GSTP1P09211 210 aaKnown RBP8.44□□□□□ -1.06
VPS8-224ENST00000488255 ADH5P11766 374 aa8.44□□□□□ -1.06
VPS8-224ENST00000488255 FSTP19883 344 aa8.44□□□□□ -1.06
VPS8-224ENST00000488255 PSMD2Q13200 908 aa8.44□□□□□ -1.06
VPS8-224ENST00000488255 FBLIM1Q8WUP2 373 aa8.44□□□□□ -1.06
VPS8-224ENST00000488255 WDR89Q96FK6 387 aaPredicted RBP8.44□□□□□ -1.06
VPS8-224ENST00000488255 NECAB3Q96P71 396 aaPredicted RBP8.44□□□□□ -1.06
VPS8-224ENST00000488255 C7orf69Q9H7B7 122 aa8.44□□□□□ -1.06
VPS8-224ENST00000488255 AOC2O75106 756 aa8.43□□□□□ -1.06
VPS8-224ENST00000488255 PAGE1O75459 146 aa8.43□□□□□ -1.06
VPS8-224ENST00000488255 RAB6AP20340 208 aa8.43□□□□□ -1.06
VPS8-224ENST00000488255 ARNTP27540 789 aa8.43□□□□□ -1.06
VPS8-224ENST00000488255 MAP4P27816 1152 aaKnown RBP8.43□□□□□ -1.06
VPS8-224ENST00000488255 FGD1P98174 961 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms