RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 CD68P34810 354 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-217ENST00000488087 NLRP12P59046 1061 aa6.43□□□□□ -1.38
ECHDC1-217ENST00000488087 CCDC85BQ15834 202 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-217ENST00000488087 FBXO11Q86XK2 927 aa6.43□□□□□ -1.38
ECHDC1-217ENST00000488087 GALNT11Q8NCW6 608 aa6.43□□□□□ -1.38
ECHDC1-217ENST00000488087 SOX17Q9H6I2 414 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-217ENST00000488087 OSGEPQ9NPF4 335 aa6.43□□□□□ -1.38
ECHDC1-217ENST00000488087 EIF4EBP3O60516 100 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-217ENST00000488087 ELNP15502 786 aa6.42□□□□□ -1.38
ECHDC1-217ENST00000488087 VAMP1P23763 118 aa6.42□□□□□ -1.38
ECHDC1-217ENST00000488087 ILDR2Q71H61 639 aa6.42□□□□□ -1.38
ECHDC1-217ENST00000488087 NECAB3Q96P71 396 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-217ENST00000488087 USP26Q9BXU7 913 aa6.42□□□□□ -1.38
ECHDC1-217ENST00000488087 USP31Q70CQ4 1352 aa6.42□□□□□ -1.38
ECHDC1-217ENST00000488087 RECKO95980 971 aa6.41□□□□□ -1.38
ECHDC1-217ENST00000488087 PROCP04070 461 aa6.41□□□□□ -1.38
ECHDC1-217ENST00000488087 SPATA31C1P0DKV0 1188 aa6.41□□□□□ -1.38
ECHDC1-217ENST00000488087 ST13P50502 369 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-217ENST00000488087 GRIK4Q16099 956 aa6.41□□□□□ -1.38
ECHDC1-217ENST00000488087 NPM2Q86SE8 214 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-217ENST00000488087 SAMM50Q9Y512 469 aa6.41□□□□□ -1.38
ECHDC1-217ENST00000488087 ENC1O14682 589 aa6.4□□□□□ -1.38
ECHDC1-217ENST00000488087 DDX3YO15523 660 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-217ENST00000488087 APBA3O96018 575 aa6.4□□□□□ -1.38
ECHDC1-217ENST00000488087 CYP11A1P05108 521 aa6.4□□□□□ -1.38
ECHDC1-217ENST00000488087 CELA3AP09093 270 aa6.4□□□□□ -1.38
ECHDC1-217ENST00000488087 COL8A1P27658 744 aa6.4□□□□□ -1.38
ECHDC1-217ENST00000488087 AP3B2Q13367 1082 aa6.4□□□□□ -1.38
ECHDC1-217ENST00000488087 MAP3K11Q16584 847 aa6.4□□□□□ -1.38
ECHDC1-217ENST00000488087 FOXD4L6Q3SYB3 417 aaPredicted RBP6.4□□□□□ -1.38
ECHDC1-217ENST00000488087 FOXD4L3Q6VB84 417 aaPredicted RBP6.4□□□□□ -1.38
ECHDC1-217ENST00000488087 SV2BQ7L1I2 683 aa6.4□□□□□ -1.38
ECHDC1-217ENST00000488087 ANKRD24Q8TF21 1146 aa6.4□□□□□ -1.38
ECHDC1-217ENST00000488087 CORO1BQ9BR76 489 aa6.4□□□□□ -1.38
ECHDC1-217ENST00000488087 CBX8Q9HC52 389 aa6.4□□□□□ -1.38
ECHDC1-217ENST00000488087 USP21Q9UK80 565 aa6.4□□□□□ -1.38
ECHDC1-217ENST00000488087 DLL1O00548 723 aa6.39□□□□□ -1.39
ECHDC1-217ENST00000488087 SCAMP3O14828 347 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-217ENST00000488087 ITGB2P05107 769 aa6.39□□□□□ -1.39
ECHDC1-217ENST00000488087 NME2P22392 152 aa6.39□□□□□ -1.39
ECHDC1-217ENST00000488087 MAOBP27338 520 aa6.39□□□□□ -1.39
ECHDC1-217ENST00000488087 POU4F3Q15319 338 aa6.39□□□□□ -1.39
ECHDC1-217ENST00000488087 DUOXA2Q1HG44 320 aa6.39□□□□□ -1.39
ECHDC1-217ENST00000488087 IGF2-ASQ6U949 168 aa6.39□□□□□ -1.39
ECHDC1-217ENST00000488087 SHISA2Q6UWI4 295 aa6.39□□□□□ -1.39
ECHDC1-217ENST00000488087 SULF2Q8IWU5 870 aa6.39□□□□□ -1.39
ECHDC1-217ENST00000488087 NACC1Q96RE7 527 aa6.39□□□□□ -1.39
ECHDC1-217ENST00000488087 KCNK4Q9NYG8 393 aa6.39□□□□□ -1.39
ECHDC1-217ENST00000488087 ADAM11O75078 769 aa6.38□□□□□ -1.39
ECHDC1-217ENST00000488087 PAGE1O75459 146 aa6.38□□□□□ -1.39
ECHDC1-217ENST00000488087 LMNB1P20700 586 aa6.38□□□□□ -1.39
ECHDC1-217ENST00000488087 ZNF76P36508 570 aa6.38□□□□□ -1.39
ECHDC1-217ENST00000488087 ALYREFQ86V81 257 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-217ENST00000488087 UBASH3BQ8TF42 649 aa6.38□□□□□ -1.39
ECHDC1-217ENST00000488087 TRIM56Q9BRZ2 755 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-217ENST00000488087 NOC4LQ9BVI4 516 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-217ENST00000488087 ZC3H12CQ9C0D7 883 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-217ENST00000488087 MRPL18Q9H0U6 180 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-217ENST00000488087 GSTP1P09211 210 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-217ENST00000488087 RLBP1P12271 317 aa6.37□□□□□ -1.39
ECHDC1-217ENST00000488087 ARNTP27540 789 aa6.37□□□□□ -1.39
ECHDC1-217ENST00000488087 PDE3AQ14432 1141 aa6.37□□□□□ -1.39
ECHDC1-217ENST00000488087 LDLRAD1Q5T700 205 aa6.37□□□□□ -1.39
ECHDC1-217ENST00000488087 LCE3BQ5TA77 95 aa6.37□□□□□ -1.39
ECHDC1-217ENST00000488087 PCNX4Q63HM2 1172 aa6.37□□□□□ -1.39
ECHDC1-217ENST00000488087 TTBK2Q6IQ55 1244 aa6.37□□□□□ -1.39
ECHDC1-217ENST00000488087 ACAD11Q709F0 780 aa6.37□□□□□ -1.39
ECHDC1-217ENST00000488087 HS2ST1Q7LGA3 356 aa6.37□□□□□ -1.39
ECHDC1-217ENST00000488087 KCNB2Q92953 911 aa6.37□□□□□ -1.39
ECHDC1-217ENST00000488087 EMILIN2Q9BXX0 1053 aa6.37□□□□□ -1.39
ECHDC1-217ENST00000488087 METTL5Q9NRN9 209 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-217ENST00000488087 GGT7Q9UJ14 662 aa6.37□□□□□ -1.39
ECHDC1-217ENST00000488087 LOC100289279A0A1B0GTE1 492 aa6.36□□□□□ -1.39
ECHDC1-217ENST00000488087 C9orf172C9J069 976 aa6.36□□□□□ -1.39
ECHDC1-217ENST00000488087 F6X3S4 739 aa6.36□□□□□ -1.39
ECHDC1-217ENST00000488087 TM4SF5O14894 197 aa6.36□□□□□ -1.39
ECHDC1-217ENST00000488087 WISP1O95388 367 aa6.36□□□□□ -1.39
ECHDC1-217ENST00000488087 SELPP16109 830 aa6.36□□□□□ -1.39
ECHDC1-217ENST00000488087 FANCCQ00597 558 aa6.36□□□□□ -1.39
ECHDC1-217ENST00000488087 HNRNPUQ00839 825 aaKnown RBP eCLIP6.36□□□□□ -1.39
ECHDC1-217ENST00000488087 HP1BP3Q5SSJ5 553 aaPredicted RBP6.36□□□□□ -1.39
ECHDC1-217ENST00000488087 MAP1SQ66K74 1059 aaPredicted RBP6.36□□□□□ -1.39
ECHDC1-217ENST00000488087 RELL1Q8IUW5 271 aa6.36□□□□□ -1.39
ECHDC1-217ENST00000488087 STK35Q8TDR2 534 aa6.36□□□□□ -1.39
ECHDC1-217ENST00000488087 RNF34Q969K3 372 aa6.36□□□□□ -1.39
ECHDC1-217ENST00000488087 RUSC1Q9BVN2 902 aa6.36□□□□□ -1.39
ECHDC1-217ENST00000488087 KRTAP9-9Q9BYP9 154 aa6.36□□□□□ -1.39
ECHDC1-217ENST00000488087 KRTAP9-4Q9BYQ2 154 aa6.36□□□□□ -1.39
ECHDC1-217ENST00000488087 NRSN2Q9GZP1 204 aa6.36□□□□□ -1.39
ECHDC1-217ENST00000488087 KRTAP4-8A0A0G2JLE6 195 aa6.35□□□□□ -1.39
ECHDC1-217ENST00000488087 ECEL1O95672 775 aa6.35□□□□□ -1.39
ECHDC1-217ENST00000488087 TCF3P15923 654 aa6.35□□□□□ -1.39
ECHDC1-217ENST00000488087 GBP2P32456 591 aaPredicted RBP6.35□□□□□ -1.39
ECHDC1-217ENST00000488087 LIG3P49916 1009 aa6.35□□□□□ -1.39
ECHDC1-217ENST00000488087 NRG1Q02297 640 aaPredicted RBP6.35□□□□□ -1.39
ECHDC1-217ENST00000488087 PWP1Q13610 501 aa6.35□□□□□ -1.39
ECHDC1-217ENST00000488087 LRRC14Q15048 493 aa6.35□□□□□ -1.39
ECHDC1-217ENST00000488087 LLGL2Q6P1M3 1020 aa6.35□□□□□ -1.39
ECHDC1-217ENST00000488087 ACSBG1Q96GR2 724 aa6.35□□□□□ -1.39
ECHDC1-217ENST00000488087 MINDY4BA8MYZ0 360 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms