RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 TRIM55Q9BYV6 548 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 CEP44Q9C0F1 390 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 SEC31BQ9NQW1 1179 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 SNTG2Q9NY99 539 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 PRKAG3Q9UGI9 489 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 DNMT3LQ9UJW3 386 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 PPT2Q9UMR5 302 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 PCDHGC4Q9Y5F7 938 aa4.76□□□□□ -1.65
GPNMB-212ENST00000487890 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.76□□□□□ -1.65
GPNMB-212ENST00000487890 KIF21BO75037 1637 aa4.75□□□□□ -1.65
GPNMB-212ENST00000487890 CD109Q6YHK3 1445 aa4.75□□□□□ -1.65
GPNMB-212ENST00000487890 A0A096LPE4 126 aa4.75□□□□□ -1.65
GPNMB-212ENST00000487890 A0A1W2PPZ6 126 aa4.75□□□□□ -1.65
GPNMB-212ENST00000487890 SMAD7O15105 426 aaKnown RBP4.75□□□□□ -1.65
GPNMB-212ENST00000487890 MAP3K6O95382 1288 aa4.75□□□□□ -1.65
GPNMB-212ENST00000487890 MAPTP10636 758 aaKnown RBP4.75□□□□□ -1.65
GPNMB-212ENST00000487890 SCARF1Q14162 830 aa4.75□□□□□ -1.65
GPNMB-212ENST00000487890 RASA3Q14644 834 aa4.75□□□□□ -1.65
GPNMB-212ENST00000487890 SEZ6Q53EL9 994 aa4.75□□□□□ -1.65
GPNMB-212ENST00000487890 RASIP1Q5U651 963 aa4.75□□□□□ -1.65
GPNMB-212ENST00000487890 KANK3Q6NY19 840 aa4.75□□□□□ -1.65
GPNMB-212ENST00000487890 BNC2Q6ZN30 1099 aaPredicted RBP4.75□□□□□ -1.65
GPNMB-212ENST00000487890 FAM196AQ6ZSG2 479 aa4.75□□□□□ -1.65
GPNMB-212ENST00000487890 FAM169BQ8N8A8 192 aa4.75□□□□□ -1.65
GPNMB-212ENST00000487890 PLD4Q96BZ4 506 aa4.75□□□□□ -1.65
GPNMB-212ENST00000487890 PNMA5Q96PV4 448 aa4.75□□□□□ -1.65
GPNMB-212ENST00000487890 DEPDC7Q96QD5 511 aa4.75□□□□□ -1.65
GPNMB-212ENST00000487890 SLC30A3Q99726 388 aa4.75□□□□□ -1.65
GPNMB-212ENST00000487890 KANSL2Q9H9L4 492 aa4.75□□□□□ -1.65
GPNMB-212ENST00000487890 ZFYVE1Q9HBF4 777 aa4.75□□□□□ -1.65
GPNMB-212ENST00000487890 PCDHB5Q9Y5E4 795 aa4.75□□□□□ -1.65
GPNMB-212ENST00000487890 CCDC85CA6NKD9 419 aa4.74□□□□□ -1.65
GPNMB-212ENST00000487890 ENPP3O14638 875 aa4.74□□□□□ -1.65
GPNMB-212ENST00000487890 U2SURPO15042 1029 aaKnown RBP4.74□□□□□ -1.65
GPNMB-212ENST00000487890 BNIP3LO60238 219 aa4.74□□□□□ -1.65
GPNMB-212ENST00000487890 CLSTN1O94985 981 aa4.74□□□□□ -1.65
GPNMB-212ENST00000487890 F13A1P00488 732 aa4.74□□□□□ -1.65
GPNMB-212ENST00000487890 HOXD8P13378 290 aaPredicted RBP4.74□□□□□ -1.65
GPNMB-212ENST00000487890 SOX18P35713 384 aa4.74□□□□□ -1.65
GPNMB-212ENST00000487890 ZNF157P51786 506 aaPredicted RBP4.74□□□□□ -1.65
GPNMB-212ENST00000487890 PLAURQ03405 335 aa4.74□□□□□ -1.65
GPNMB-212ENST00000487890 SPEM2Q0P670 501 aa4.74□□□□□ -1.65
GPNMB-212ENST00000487890 RIPOR1Q6ZS17 1223 aa4.74□□□□□ -1.65
GPNMB-212ENST00000487890 DHX32Q7L7V1 743 aaKnown RBP4.74□□□□□ -1.65
GPNMB-212ENST00000487890 RAB44Q7Z6P3 723 aaPredicted RBP4.74□□□□□ -1.65
GPNMB-212ENST00000487890 CELF2-AS1Q8N7Q2 184 aa4.74□□□□□ -1.65
GPNMB-212ENST00000487890 JARID2Q92833 1246 aaPredicted RBP4.74□□□□□ -1.65
GPNMB-212ENST00000487890 BHMTQ93088 406 aa4.74□□□□□ -1.65
GPNMB-212ENST00000487890 ZFP42Q96MM3 310 aa4.74□□□□□ -1.65
GPNMB-212ENST00000487890 NSUN5Q96P11 429 aaKnown RBP4.74□□□□□ -1.65
GPNMB-212ENST00000487890 BHLHE41Q9C0J9 482 aaPredicted RBP4.74□□□□□ -1.65
GPNMB-212ENST00000487890 ZNF576Q9H609 170 aa4.74□□□□□ -1.65
GPNMB-212ENST00000487890 R3HCC1Q9Y3T6 440 aaKnown RBP4.74□□□□□ -1.65
GPNMB-212ENST00000487890 ATP10BO94823 1461 aa4.74□□□□□ -1.65
GPNMB-212ENST00000487890 EFCAB5A4FU69 1503 aa4.73□□□□□ -1.65
GPNMB-212ENST00000487890 FAM221AA4D161 298 aa4.73□□□□□ -1.65
GPNMB-212ENST00000487890 ZBTB42B2RXF5 422 aa4.73□□□□□ -1.65
GPNMB-212ENST00000487890 J3QW42 95 aa4.73□□□□□ -1.65
GPNMB-212ENST00000487890 PDE2AO00408 941 aaPredicted RBP4.73□□□□□ -1.65
GPNMB-212ENST00000487890 GIPRP48546 466 aa4.73□□□□□ -1.65
GPNMB-212ENST00000487890 RPS26P62854 115 aaKnown RBP4.73□□□□□ -1.65
GPNMB-212ENST00000487890 MLLT1Q03111 559 aaPredicted RBP4.73□□□□□ -1.65
GPNMB-212ENST00000487890 LAMC2Q13753 1193 aa4.73□□□□□ -1.65
GPNMB-212ENST00000487890 LBRQ14739 615 aaKnown RBP4.73□□□□□ -1.65
GPNMB-212ENST00000487890 FIGNL1Q6PIW4 674 aa4.73□□□□□ -1.65
GPNMB-212ENST00000487890 HFE2Q6ZVN8 426 aa4.73□□□□□ -1.65
GPNMB-212ENST00000487890 TRIM42Q8IWZ5 723 aa4.73□□□□□ -1.65
GPNMB-212ENST00000487890 LILRB2Q8N423 598 aa4.73□□□□□ -1.65
GPNMB-212ENST00000487890 TMEM102Q8N9M5 508 aaPredicted RBP4.73□□□□□ -1.65
GPNMB-212ENST00000487890 ASAP3Q8TDY4 903 aa4.73□□□□□ -1.65
GPNMB-212ENST00000487890 KCNB2Q92953 911 aa4.73□□□□□ -1.65
GPNMB-212ENST00000487890 MUC3BQ9H195 1237 aa4.73□□□□□ -1.65
GPNMB-212ENST00000487890 RASSF4Q9H2L5 321 aa4.73□□□□□ -1.65
GPNMB-212ENST00000487890 CWC22Q9HCG8 908 aaKnown RBP4.73□□□□□ -1.65
GPNMB-212ENST00000487890 ST7Q9NRC1 585 aa4.73□□□□□ -1.65
GPNMB-212ENST00000487890 NDFIP2Q9NV92 336 aa4.73□□□□□ -1.65
GPNMB-212ENST00000487890 PLA2G2EQ9NZK7 142 aa4.73□□□□□ -1.65
GPNMB-212ENST00000487890 MARK1Q9P0L2 795 aa4.73□□□□□ -1.65
GPNMB-212ENST00000487890 ROBO2Q9HCK4 1378 aa4.73□□□□□ -1.65
GPNMB-212ENST00000487890 ADGRL1O94910 1474 aa4.73□□□□□ -1.65
GPNMB-212ENST00000487890 LOC102724428A0A0B4J2F2 783 aa4.72□□□□□ -1.65
GPNMB-212ENST00000487890 RAB11FIP3O75154 756 aa4.72□□□□□ -1.65
GPNMB-212ENST00000487890 CD33P20138 364 aa4.72□□□□□ -1.65
GPNMB-212ENST00000487890 BMP6P22004 513 aa4.72□□□□□ -1.65
GPNMB-212ENST00000487890 NRLP54845 237 aa4.72□□□□□ -1.65
GPNMB-212ENST00000487890 EIF6P56537 245 aaKnown RBP4.72□□□□□ -1.65
GPNMB-212ENST00000487890 SIK1P57059 783 aa4.72□□□□□ -1.65
GPNMB-212ENST00000487890 CHMP4BP1P59074 171 aa4.72□□□□□ -1.65
GPNMB-212ENST00000487890 IGBP1P78318 339 aa4.72□□□□□ -1.65
GPNMB-212ENST00000487890 ATP11AP98196 1134 aa4.72□□□□□ -1.65
GPNMB-212ENST00000487890 DBN1Q16643 649 aa4.72□□□□□ -1.65
GPNMB-212ENST00000487890 PLEKHG4Q58EX7 1191 aa4.72□□□□□ -1.65
GPNMB-212ENST00000487890 RPS26P11Q5JNZ5 115 aaPredicted RBP4.72□□□□□ -1.65
GPNMB-212ENST00000487890 LRP10Q7Z4F1 713 aa4.72□□□□□ -1.65
GPNMB-212ENST00000487890 STK35Q8TDR2 534 aa4.72□□□□□ -1.65
GPNMB-212ENST00000487890 GATAD2BQ8WXI9 593 aa4.72□□□□□ -1.65
GPNMB-212ENST00000487890 DNAJC7Q99615 494 aa4.72□□□□□ -1.65
GPNMB-212ENST00000487890 LRRC3Q9BY71 257 aa4.72□□□□□ -1.65
GPNMB-212ENST00000487890 PBX4Q9BYU1 374 aa4.72□□□□□ -1.65
GPNMB-212ENST00000487890 CCDC113Q9H0I3 377 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms