RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 HELQQ8TDG4 1101 aa7.05□□□□□ -1.28
HMGB1P36-201ENST00000487709 PAK6Q9NQU5 681 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P36-201ENST00000487709 PHACTR2O75167 634 aa7.04□□□□□ -1.28
HMGB1P36-201ENST00000487709 EDN3P14138 238 aa7.04□□□□□ -1.28
HMGB1P36-201ENST00000487709 JUNBP17275 347 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P36-201ENST00000487709 MZF1P28698 734 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P36-201ENST00000487709 AGBL5Q8NDL9 886 aa7.04□□□□□ -1.28
HMGB1P36-201ENST00000487709 SOX17Q9H6I2 414 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P36-201ENST00000487709 LATS2Q9NRM7 1088 aa7.04□□□□□ -1.28
HMGB1P36-201ENST00000487709 METTL12A8MUP2 240 aa7.03□□□□□ -1.28
HMGB1P36-201ENST00000487709 NFICP08651 508 aa7.03□□□□□ -1.28
HMGB1P36-201ENST00000487709 ADH5P11766 374 aa7.03□□□□□ -1.28
HMGB1P36-201ENST00000487709 MPSTP25325 297 aa7.03□□□□□ -1.28
HMGB1P36-201ENST00000487709 EIF1AXP47813 144 aaKnown RBP7.03□□□□□ -1.28
HMGB1P36-201ENST00000487709 EZH1Q92800 747 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P36-201ENST00000487709 GATA6Q92908 595 aa7.03□□□□□ -1.28
HMGB1P36-201ENST00000487709 ZC3H7BQ9UGR2 993 aaKnown RBP7.03□□□□□ -1.28
HMGB1P36-201ENST00000487709 POLIQ9UNA4 740 aa7.03□□□□□ -1.28
HMGB1P36-201ENST00000487709 ACTL7BQ9Y614 415 aa7.03□□□□□ -1.28
HMGB1P36-201ENST00000487709 TNFRSF21O75509 655 aa7.02□□□□□ -1.29
HMGB1P36-201ENST00000487709 DUSP27Q5VZP5 1158 aa7.02□□□□□ -1.29
HMGB1P36-201ENST00000487709 ZNF765Q7L2R6 523 aa7.02□□□□□ -1.29
HMGB1P36-201ENST00000487709 BHLHE41Q9C0J9 482 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P36-201ENST00000487709 FOXD3Q9UJU5 478 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P36-201ENST00000487709 SNX29Q8TEQ0 813 aa7.01□□□□□ -1.29
HMGB1P36-201ENST00000487709 PAPLNO95428 1278 aa7□□□□□ -1.29
HMGB1P36-201ENST00000487709 MTMR3Q13615 1198 aa7□□□□□ -1.29
HMGB1P36-201ENST00000487709 AAMPQ13685 434 aa7□□□□□ -1.29
HMGB1P36-201ENST00000487709 MAP7Q14244 749 aa7□□□□□ -1.29
HMGB1P36-201ENST00000487709 ZNF648Q5T619 568 aaPredicted RBP7□□□□□ -1.29
HMGB1P36-201ENST00000487709 ZNF574Q6ZN55 896 aaPredicted RBP7□□□□□ -1.29
HMGB1P36-201ENST00000487709 DYMQ7RTS9 669 aa7□□□□□ -1.29
HMGB1P36-201ENST00000487709 SEMA6CQ9H3T2 930 aa7□□□□□ -1.29
HMGB1P36-201ENST00000487709 C1orf115Q9H7X2 142 aa7□□□□□ -1.29
HMGB1P36-201ENST00000487709 AP4E1Q9UPM8 1137 aa7□□□□□ -1.29
HMGB1P36-201ENST00000487709 CTSBP07858 339 aa6.99□□□□□ -1.29
HMGB1P36-201ENST00000487709 MAOBP27338 520 aa6.99□□□□□ -1.29
HMGB1P36-201ENST00000487709 PLCL1Q15111 1095 aa6.99□□□□□ -1.29
HMGB1P36-201ENST00000487709 AKAP4Q5JQC9 854 aa6.99□□□□□ -1.29
HMGB1P36-201ENST00000487709 PEAR1Q5VY43 1037 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P36-201ENST00000487709 NRSN2Q9GZP1 204 aa6.99□□□□□ -1.29
HMGB1P36-201ENST00000487709 FAM105AQ9NUU6 356 aa6.99□□□□□ -1.29
HMGB1P36-201ENST00000487709 POLR3DP05423 398 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P36-201ENST00000487709 CYP27A1Q02318 531 aa6.98□□□□□ -1.29
HMGB1P36-201ENST00000487709 PDE4CQ08493 712 aa6.98□□□□□ -1.29
HMGB1P36-201ENST00000487709 GTF3C2Q8WUA4 911 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P36-201ENST00000487709 KRTAP4-9Q9BYQ8 210 aa6.98□□□□□ -1.29
HMGB1P36-201ENST00000487709 LGR6Q9HBX8 967 aa6.98□□□□□ -1.29
HMGB1P36-201ENST00000487709 SLC5A6Q9Y289 635 aa6.98□□□□□ -1.29
HMGB1P36-201ENST00000487709 AMOTL2Q9Y2J4 779 aa6.98□□□□□ -1.29
HMGB1P36-201ENST00000487709 PPP1R15AO75807 674 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P36-201ENST00000487709 PCDH1Q08174 1060 aa6.97□□□□□ -1.29
HMGB1P36-201ENST00000487709 POU4F3Q15319 338 aa6.97□□□□□ -1.29
HMGB1P36-201ENST00000487709 ZNF124Q15973 351 aa6.97□□□□□ -1.29
HMGB1P36-201ENST00000487709 BCL7CQ8WUZ0 217 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P36-201ENST00000487709 PBXIP1Q96AQ6 731 aa6.97□□□□□ -1.29
HMGB1P36-201ENST00000487709 RAD18Q9NS91 495 aa6.97□□□□□ -1.29
HMGB1P36-201ENST00000487709 DAGLAQ9Y4D2 1042 aa6.97□□□□□ -1.29
HMGB1P36-201ENST00000487709 DYNC1LI2O43237 492 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P36-201ENST00000487709 CYP11A1P05108 521 aa6.96□□□□□ -1.3
HMGB1P36-201ENST00000487709 ZNF792Q3KQV3 632 aa6.96□□□□□ -1.3
HMGB1P36-201ENST00000487709 ALKBH2Q6NS38 261 aa6.96□□□□□ -1.3
HMGB1P36-201ENST00000487709 ACSS3Q9H6R3 686 aa6.96□□□□□ -1.3
HMGB1P36-201ENST00000487709 A0A096LPE4 126 aa6.95□□□□□ -1.3
HMGB1P36-201ENST00000487709 A0A1W2PPZ6 126 aa6.95□□□□□ -1.3
HMGB1P36-201ENST00000487709 ECEL1O95672 775 aa6.95□□□□□ -1.3
HMGB1P36-201ENST00000487709 ASPAP45381 313 aa6.95□□□□□ -1.3
HMGB1P36-201ENST00000487709 ZNF423Q2M1K9 1284 aa6.95□□□□□ -1.3
HMGB1P36-201ENST00000487709 SPRED2Q7Z698 418 aa6.95□□□□□ -1.3
HMGB1P36-201ENST00000487709 CLEC4MQ9H2X3 399 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P36-201ENST00000487709 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P36-201ENST00000487709 EIF4EBP3O60516 100 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P36-201ENST00000487709 EHHADHQ08426 723 aa6.94□□□□□ -1.3
HMGB1P36-201ENST00000487709 SPRED3Q2MJR0 410 aa6.94□□□□□ -1.3
HMGB1P36-201ENST00000487709 HP1BP3Q5SSJ5 553 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P36-201ENST00000487709 WFDC3Q8IUB2 231 aa6.94□□□□□ -1.3
HMGB1P36-201ENST00000487709 C1GALT1Q9NS00 363 aa6.94□□□□□ -1.3
HMGB1P36-201ENST00000487709 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P36-201ENST00000487709 CARMIL2Q6F5E8 1435 aa6.93□□□□□ -1.3
HMGB1P36-201ENST00000487709 BIN1O00499 593 aa6.93□□□□□ -1.3
HMGB1P36-201ENST00000487709 GRIA4P48058 902 aa6.93□□□□□ -1.3
HMGB1P36-201ENST00000487709 BNIP3Q12983 259 aa6.93□□□□□ -1.3
HMGB1P36-201ENST00000487709 LCE4AQ5TA78 99 aa6.93□□□□□ -1.3
HMGB1P36-201ENST00000487709 STK11IPQ8N1F8 1099 aa6.93□□□□□ -1.3
HMGB1P36-201ENST00000487709 CORO1BQ9BR76 489 aa6.93□□□□□ -1.3
HMGB1P36-201ENST00000487709 ZFYVE28Q9HCC9 887 aa6.93□□□□□ -1.3
HMGB1P36-201ENST00000487709 USP5P45974 858 aa6.92□□□□□ -1.3
HMGB1P36-201ENST00000487709 PDE3AQ14432 1141 aa6.92□□□□□ -1.3
HMGB1P36-201ENST00000487709 SEZ6L2Q6UXD5 910 aa6.92□□□□□ -1.3
HMGB1P36-201ENST00000487709 CCNJLQ8IV13 435 aa6.92□□□□□ -1.3
HMGB1P36-201ENST00000487709 TRIM56Q9BRZ2 755 aaKnown RBP6.92□□□□□ -1.3
HMGB1P36-201ENST00000487709 LIN7BQ9HAP6 207 aa6.92□□□□□ -1.3
HMGB1P36-201ENST00000487709 A0A1W2PP55 124 aa6.91□□□□□ -1.3
HMGB1P36-201ENST00000487709 OGFOD3Q6PK18 319 aa6.91□□□□□ -1.3
HMGB1P36-201ENST00000487709 PLD6Q8N2A8 252 aaKnown RBP6.91□□□□□ -1.3
HMGB1P36-201ENST00000487709 FAM181AQ8N9Y4 354 aa6.91□□□□□ -1.3
HMGB1P36-201ENST00000487709 RC3H2Q9HBD1 1191 aaKnown RBP6.91□□□□□ -1.3
HMGB1P36-201ENST00000487709 FZD6O60353 706 aa6.9□□□□□ -1.3
HMGB1P36-201ENST00000487709 CDK5R2Q13319 367 aa6.9□□□□□ -1.3
HMGB1P36-201ENST00000487709 FAM168AQ92567 244 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms