RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 DENND2AQ9ULE3 1009 aa13.59□□□□□ -0.23
TRA2B-214ENST00000487615 ZBTB1Q9Y2K1 713 aa13.59□□□□□ -0.23
TRA2B-214ENST00000487615 A0A1B0GVL5 298 aa13.59□□□□□ -0.23
TRA2B-214ENST00000487615 OFD1O75665 1012 aa13.59□□□□□ -0.23
TRA2B-214ENST00000487615 OTUD7BQ6GQQ9 843 aa13.59□□□□□ -0.23
TRA2B-214ENST00000487615 PRIMPOLQ96LW4 560 aa13.59□□□□□ -0.23
TRA2B-214ENST00000487615 ANKRD2Q9GZV1 360 aa13.59□□□□□ -0.23
TRA2B-214ENST00000487615 STX8Q9UNK0 236 aa13.59□□□□□ -0.23
TRA2B-214ENST00000487615 CALM1P0DP23 149 aa13.58□□□□□ -0.23
TRA2B-214ENST00000487615 CALM2P0DP24 149 aa13.58□□□□□ -0.23
TRA2B-214ENST00000487615 CALM3P0DP25 149 aa13.58□□□□□ -0.23
TRA2B-214ENST00000487615 ADORA1P30542 326 aa13.58□□□□□ -0.23
TRA2B-214ENST00000487615 EPS15P42566 896 aa13.58□□□□□ -0.23
TRA2B-214ENST00000487615 ZKSCAN3Q9BRR0 538 aa13.58□□□□□ -0.23
TRA2B-214ENST00000487615 TTC6Q86TZ1 520 aa13.58□□□□□ -0.24
TRA2B-214ENST00000487615 TRMT1Q9NXH9 659 aaKnown RBP13.58□□□□□ -0.24
TRA2B-214ENST00000487615 FGAP02671 866 aa13.58□□□□□ -0.24
TRA2B-214ENST00000487615 PDE8BO95263 885 aa13.58□□□□□ -0.24
TRA2B-214ENST00000487615 LARGE1O95461 756 aa13.58□□□□□ -0.24
TRA2B-214ENST00000487615 KRT18P05783 430 aaKnown RBP13.58□□□□□ -0.24
TRA2B-214ENST00000487615 IL6STP40189 918 aaPredicted RBP13.58□□□□□ -0.24
TRA2B-214ENST00000487615 TRIM75PA6NK02 468 aa13.57□□□□□ -0.24
TRA2B-214ENST00000487615 ANO1Q5XXA6 986 aa13.57□□□□□ -0.24
TRA2B-214ENST00000487615 NOC3LQ8WTT2 800 aaKnown RBP13.57□□□□□ -0.24
TRA2B-214ENST00000487615 PYM1Q9BRP8 204 aaKnown RBP13.57□□□□□ -0.24
TRA2B-214ENST00000487615 MAST3O60307 1309 aa13.57□□□□□ -0.24
TRA2B-214ENST00000487615 ZNF335Q9H4Z2 1342 aaPredicted RBP13.57□□□□□ -0.24
TRA2B-214ENST00000487615 GNPATO15228 680 aa13.57□□□□□ -0.24
TRA2B-214ENST00000487615 ZSCAN12O43309 604 aa13.57□□□□□ -0.24
TRA2B-214ENST00000487615 CLEC17AQ6ZS10 378 aa13.57□□□□□ -0.24
TRA2B-214ENST00000487615 CCDC12Q8WUD4 166 aaPredicted RBP13.57□□□□□ -0.24
TRA2B-214ENST00000487615 CCDC43Q96MW1 224 aaKnown RBP13.57□□□□□ -0.24
TRA2B-214ENST00000487615 PDE6AP16499 860 aa13.57□□□□□ -0.24
TRA2B-214ENST00000487615 ST5P78524 1137 aa13.57□□□□□ -0.24
TRA2B-214ENST00000487615 CCDC150Q8NCX0 1101 aa13.57□□□□□ -0.24
TRA2B-214ENST00000487615 PIGBQ92521 554 aa13.57□□□□□ -0.24
TRA2B-214ENST00000487615 ANKRD26Q9UPS8 1709 aa13.57□□□□□ -0.24
TRA2B-214ENST00000487615 AEBP2Q6ZN18 517 aaPredicted RBP13.56□□□□□ -0.24
TRA2B-214ENST00000487615 CCDC178Q5BJE1 867 aa13.56□□□□□ -0.24
TRA2B-214ENST00000487615 BMP2KQ9NSY1 1161 aaPredicted RBP13.56□□□□□ -0.24
TRA2B-214ENST00000487615 MPHOSPH10O00566 681 aaKnown RBP13.56□□□□□ -0.24
TRA2B-214ENST00000487615 GNAQP50148 359 aa13.56□□□□□ -0.24
TRA2B-214ENST00000487615 NAP1L1P55209 391 aaKnown RBP13.56□□□□□ -0.24
TRA2B-214ENST00000487615 SLIT1O75093 1534 aa13.56□□□□□ -0.24
TRA2B-214ENST00000487615 TSPY3P0CV98 308 aa13.56□□□□□ -0.24
TRA2B-214ENST00000487615 TSPY8P0CW00 308 aa13.56□□□□□ -0.24
TRA2B-214ENST00000487615 SKILP12757 684 aa13.56□□□□□ -0.24
TRA2B-214ENST00000487615 LIG1P18858 919 aa13.56□□□□□ -0.24
TRA2B-214ENST00000487615 PTGS1P23219 599 aa13.56□□□□□ -0.24
TRA2B-214ENST00000487615 SCRN1Q12765 414 aa13.56□□□□□ -0.24
TRA2B-214ENST00000487615 MCM9Q9NXL9 1143 aa13.56□□□□□ -0.24
TRA2B-214ENST00000487615 DYNC1I1O14576 645 aa13.55□□□□□ -0.24
TRA2B-214ENST00000487615 UBASH3AP57075 661 aa13.55□□□□□ -0.24
TRA2B-214ENST00000487615 NLRP10Q86W26 655 aa13.55□□□□□ -0.24
TRA2B-214ENST00000487615 CRACR2BQ8N4Y2 399 aaPredicted RBP13.55□□□□□ -0.24
TRA2B-214ENST00000487615 USP42Q9H9J4 1324 aaKnown RBP13.55□□□□□ -0.24
TRA2B-214ENST00000487615 SSBP05455 408 aaKnown RBP eCLIP13.55□□□□□ -0.24
TRA2B-214ENST00000487615 UBA7P41226 1012 aa13.55□□□□□ -0.24
TRA2B-214ENST00000487615 ZNF771Q7L3S4 317 aaPredicted RBP13.55□□□□□ -0.24
TRA2B-214ENST00000487615 ZNF804AQ7Z570 1209 aa13.55□□□□□ -0.24
TRA2B-214ENST00000487615 PDCL2Q8N4E4 241 aa13.55□□□□□ -0.24
TRA2B-214ENST00000487615 LMOD1P29536 600 aaPredicted RBP13.55□□□□□ -0.24
TRA2B-214ENST00000487615 UBE3CQ15386 1083 aa13.55□□□□□ -0.24
TRA2B-214ENST00000487615 KRI1Q8N9T8 703 aaKnown RBP13.55□□□□□ -0.24
TRA2B-214ENST00000487615 TTC14Q96N46 770 aa13.55□□□□□ -0.24
TRA2B-214ENST00000487615 CBX8Q9HC52 389 aa13.55□□□□□ -0.24
TRA2B-214ENST00000487615 ELP1O95163 1332 aa13.55□□□□□ -0.24
TRA2B-214ENST00000487615 LOC102724428A0A0B4J2F2 783 aa13.54□□□□□ -0.24
TRA2B-214ENST00000487615 PATL2C9JE40 543 aaKnown RBP13.54□□□□□ -0.24
TRA2B-214ENST00000487615 DEXIO95424 95 aa13.54□□□□□ -0.24
TRA2B-214ENST00000487615 PHKA1P46020 1223 aa13.54□□□□□ -0.24
TRA2B-214ENST00000487615 SIK1P57059 783 aa13.54□□□□□ -0.24
TRA2B-214ENST00000487615 CTDSPL2Q05D32 466 aa13.54□□□□□ -0.24
TRA2B-214ENST00000487615 RILPL1Q5EBL4 403 aa13.54□□□□□ -0.24
TRA2B-214ENST00000487615 TEX35Q5T0J7 233 aa13.54□□□□□ -0.24
TRA2B-214ENST00000487615 ARHGAP23Q9P227 1491 aa13.54□□□□□ -0.24
TRA2B-214ENST00000487615 PDIA3P30101 505 aaKnown RBP13.54□□□□□ -0.24
TRA2B-214ENST00000487615 FAM98CQ17RN3 349 aaKnown RBP13.54□□□□□ -0.24
TRA2B-214ENST00000487615 AKNAD1Q5T1N1 836 aa13.54□□□□□ -0.24
TRA2B-214ENST00000487615 PHKBQ93100 1093 aa13.54□□□□□ -0.24
TRA2B-214ENST00000487615 HIBADHP31937 336 aaKnown RBP13.54□□□□□ -0.24
TRA2B-214ENST00000487615 ARHGAP29Q52LW3 1261 aa13.54□□□□□ -0.24
TRA2B-214ENST00000487615 KRT40Q6A162 431 aa13.54□□□□□ -0.24
TRA2B-214ENST00000487615 USP28Q96RU2 1077 aa13.54□□□□□ -0.24
TRA2B-214ENST00000487615 MYL10Q9BUA6 226 aa13.54□□□□□ -0.24
TRA2B-214ENST00000487615 RAB34Q9BZG1 259 aa13.54□□□□□ -0.24
TRA2B-214ENST00000487615 TCP11L1Q9NUJ3 509 aa13.54□□□□□ -0.24
TRA2B-214ENST00000487615 NSFL1CQ9UNZ2 370 aaKnown RBP13.54□□□□□ -0.24
TRA2B-214ENST00000487615 YEATS4O95619 227 aa13.54□□□□□ -0.24
TRA2B-214ENST00000487615 TICAM2Q86XR7 235 aa13.54□□□□□ -0.24
TRA2B-214ENST00000487615 ZHX3Q9H4I2 956 aa13.54□□□□□ -0.24
TRA2B-214ENST00000487615 LDHBP07195 334 aaKnown RBP13.53□□□□□ -0.24
TRA2B-214ENST00000487615 KRT2P35908 639 aa13.53□□□□□ -0.24
TRA2B-214ENST00000487615 EIF5P55010 431 aaKnown RBP13.53□□□□□ -0.24
TRA2B-214ENST00000487615 CCDC148Q8NFR7 591 aa13.53□□□□□ -0.24
TRA2B-214ENST00000487615 CCNL1Q9UK58 526 aaPredicted RBP13.53□□□□□ -0.24
TRA2B-214ENST00000487615 AFMP43652 599 aa13.53□□□□□ -0.24
TRA2B-214ENST00000487615 MYSM1Q5VVJ2 828 aa13.53□□□□□ -0.24
TRA2B-214ENST00000487615 CEP89Q96ST8 783 aa13.53□□□□□ -0.24
TRA2B-214ENST00000487615 RBM28Q9NW13 759 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms