RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 ZNF804AQ7Z570 1209 aa8.4□□□□□ -1.06
SF3A3-206ENST00000487062 CCDC125Q86Z20 511 aa8.4□□□□□ -1.06
SF3A3-206ENST00000487062 MAGEB6Q8N7X4 407 aa8.4□□□□□ -1.06
SF3A3-206ENST00000487062 AIDAQ96BJ3 306 aa8.4□□□□□ -1.06
SF3A3-206ENST00000487062 UPF3BQ9BZI7 483 aaKnown RBP8.4□□□□□ -1.06
SF3A3-206ENST00000487062 TMX4Q9H1E5 349 aaPredicted RBP8.4□□□□□ -1.06
SF3A3-206ENST00000487062 CWC22Q9HCG8 908 aaKnown RBP8.4□□□□□ -1.06
SF3A3-206ENST00000487062 ZSWIM6Q9HCJ5 1215 aa8.4□□□□□ -1.06
SF3A3-206ENST00000487062 KIAA1551Q9HCM1 1747 aa8.4□□□□□ -1.07
SF3A3-206ENST00000487062 DUOX1Q9NRD9 1551 aa8.39□□□□□ -1.07
SF3A3-206ENST00000487062 EP400Q96L91 3159 aa8.39□□□□□ -1.07
SF3A3-206ENST00000487062 RPAP1Q9BWH6 1393 aaPredicted RBP8.39□□□□□ -1.07
SF3A3-206ENST00000487062 PPEF1O14829 653 aaPredicted RBP8.39□□□□□ -1.07
SF3A3-206ENST00000487062 GPAA1O43292 621 aa8.39□□□□□ -1.07
SF3A3-206ENST00000487062 CHGBP05060 677 aa8.39□□□□□ -1.07
SF3A3-206ENST00000487062 PRR29P0C7W0 189 aa8.39□□□□□ -1.07
SF3A3-206ENST00000487062 GNAT2P19087 354 aa8.39□□□□□ -1.07
SF3A3-206ENST00000487062 ANKRD1Q15327 319 aa8.39□□□□□ -1.07
SF3A3-206ENST00000487062 IMMTQ16891 758 aaKnown RBP8.39□□□□□ -1.07
SF3A3-206ENST00000487062 SPTY2D1Q68D10 685 aaPredicted RBP8.39□□□□□ -1.07
SF3A3-206ENST00000487062 ZNF467Q7Z7K2 595 aaPredicted RBP8.39□□□□□ -1.07
SF3A3-206ENST00000487062 SP8Q8IXZ3 490 aa8.39□□□□□ -1.07
SF3A3-206ENST00000487062 ZGPATQ8N5A5 531 aaKnown RBP8.39□□□□□ -1.07
SF3A3-206ENST00000487062 MASTLQ96GX5 879 aa8.39□□□□□ -1.07
SF3A3-206ENST00000487062 ZSCAN31Q96LW9 406 aaPredicted RBP8.39□□□□□ -1.07
SF3A3-206ENST00000487062 TTC14Q96N46 770 aa8.39□□□□□ -1.07
SF3A3-206ENST00000487062 NEK1Q96PY6 1258 aa8.39□□□□□ -1.07
SF3A3-206ENST00000487062 ANP32EQ9BTT0 268 aa8.39□□□□□ -1.07
SF3A3-206ENST00000487062 PUS7LQ9H0K6 701 aaKnown RBP8.39□□□□□ -1.07
SF3A3-206ENST00000487062 ALDH8A1Q9H2A2 487 aaPredicted RBP8.39□□□□□ -1.07
SF3A3-206ENST00000487062 ANO8Q9HCE9 1232 aaPredicted RBP8.39□□□□□ -1.07
SF3A3-206ENST00000487062 PDRG1Q9NUG6 133 aa8.39□□□□□ -1.07
SF3A3-206ENST00000487062 PODXL2Q9NZ53 605 aa8.39□□□□□ -1.07
SF3A3-206ENST00000487062 RAI14Q9P0K7 980 aa8.39□□□□□ -1.07
SF3A3-206ENST00000487062 GGA1Q9UJY5 639 aa8.39□□□□□ -1.07
SF3A3-206ENST00000487062 WWC3Q9ULE0 1092 aa8.39□□□□□ -1.07
SF3A3-206ENST00000487062 IQSEC3Q9UPP2 1182 aaPredicted RBP8.39□□□□□ -1.07
SF3A3-206ENST00000487062 CHD4Q14839 1912 aa8.39□□□□□ -1.07
SF3A3-206ENST00000487062 COL11A2P13942 1736 aaPredicted RBP8.38□□□□□ -1.07
SF3A3-206ENST00000487062 TCRBV5S4A2TA0A5A2 114 aa8.38□□□□□ -1.07
SF3A3-206ENST00000487062 H0YIN7 160 aa8.38□□□□□ -1.07
SF3A3-206ENST00000487062 UFL1O94874 794 aa8.38□□□□□ -1.07
SF3A3-206ENST00000487062 CYP21A2P08686 494 aa8.38□□□□□ -1.07
SF3A3-206ENST00000487062 SRGNP10124 158 aa8.38□□□□□ -1.07
SF3A3-206ENST00000487062 RPS6KB1P23443 525 aa8.38□□□□□ -1.07
SF3A3-206ENST00000487062 AK2P54819 239 aa8.38□□□□□ -1.07
SF3A3-206ENST00000487062 GPSM2P81274 684 aa8.38□□□□□ -1.07
SF3A3-206ENST00000487062 CUL4AQ13619 759 aa8.38□□□□□ -1.07
SF3A3-206ENST00000487062 ADCK5Q3MIX3 580 aa8.38□□□□□ -1.07
SF3A3-206ENST00000487062 SLFNL1Q499Z3 407 aa8.38□□□□□ -1.07
SF3A3-206ENST00000487062 MSL1Q68DK7 614 aa8.38□□□□□ -1.07
SF3A3-206ENST00000487062 WDR66Q8TBY9 1149 aa8.38□□□□□ -1.07
SF3A3-206ENST00000487062 SLC16A10Q8TF71 515 aa8.38□□□□□ -1.07
SF3A3-206ENST00000487062 INTS4Q96HW7 963 aaKnown RBP8.38□□□□□ -1.07
SF3A3-206ENST00000487062 TMX3Q96JJ7 454 aa8.38□□□□□ -1.07
SF3A3-206ENST00000487062 ABCF2Q9UG63 623 aa8.38□□□□□ -1.07
SF3A3-206ENST00000487062 NSFL1CQ9UNZ2 370 aaKnown RBP8.38□□□□□ -1.07
SF3A3-206ENST00000487062 LIMCH1Q9UPQ0 1083 aa8.38□□□□□ -1.07
SF3A3-206ENST00000487062 ATP6V0A2Q9Y487 856 aa8.38□□□□□ -1.07
SF3A3-206ENST00000487062 LTBP1Q14766 1721 aa8.37□□□□□ -1.07
SF3A3-206ENST00000487062 ZMYM6O95789 1325 aa8.37□□□□□ -1.07
SF3A3-206ENST00000487062 IRS2Q9Y4H2 1338 aa8.37□□□□□ -1.07
SF3A3-206ENST00000487062 ZNF213O14771 459 aa8.37□□□□□ -1.07
SF3A3-206ENST00000487062 APPP05067 770 aa8.37□□□□□ -1.07
SF3A3-206ENST00000487062 CYP7A1P22680 504 aa8.37□□□□□ -1.07
SF3A3-206ENST00000487062 CHAF1AQ13111 956 aaPredicted RBP8.37□□□□□ -1.07
SF3A3-206ENST00000487062 PDAP1Q13442 181 aaKnown RBP8.37□□□□□ -1.07
SF3A3-206ENST00000487062 ALX1Q15699 326 aa8.37□□□□□ -1.07
SF3A3-206ENST00000487062 STYK1Q6J9G0 422 aa8.37□□□□□ -1.07
SF3A3-206ENST00000487062 NAA16Q6N069 864 aaPredicted RBP8.37□□□□□ -1.07
SF3A3-206ENST00000487062 NOL8Q76FK4 1167 aaKnown RBP8.37□□□□□ -1.07
SF3A3-206ENST00000487062 NACAP1Q9BZK3 213 aa8.37□□□□□ -1.07
SF3A3-206ENST00000487062 SH2B1Q9NRF2 756 aaPredicted RBP8.37□□□□□ -1.07
SF3A3-206ENST00000487062 SALL1Q9NSC2 1324 aa8.36□□□□□ -1.07
SF3A3-206ENST00000487062 MAGEB6P1A0A0J9YX57 407 aa8.36□□□□□ -1.07
SF3A3-206ENST00000487062 WTIPA6NIX2 430 aaPredicted RBP8.36□□□□□ -1.07
SF3A3-206ENST00000487062 PATL2C9JE40 543 aaKnown RBP8.36□□□□□ -1.07
SF3A3-206ENST00000487062 E7EWF7 191 aa8.36□□□□□ -1.07
SF3A3-206ENST00000487062 C6orf229H3BNL8 230 aa8.36□□□□□ -1.07
SF3A3-206ENST00000487062 MBD4O95243 580 aa8.36□□□□□ -1.07
SF3A3-206ENST00000487062 FGAP02671 866 aa8.36□□□□□ -1.07
SF3A3-206ENST00000487062 KLRK1P26718 216 aa8.36□□□□□ -1.07
SF3A3-206ENST00000487062 DDIT3P35638 169 aa8.36□□□□□ -1.07
SF3A3-206ENST00000487062 NUCB2P80303 420 aa8.36□□□□□ -1.07
SF3A3-206ENST00000487062 FGD1P98174 961 aa8.36□□□□□ -1.07
SF3A3-206ENST00000487062 DEFB132Q7Z7B7 95 aa8.36□□□□□ -1.07
SF3A3-206ENST00000487062 C2CD5Q86YS7 1000 aa8.36□□□□□ -1.07
SF3A3-206ENST00000487062 MPNDQ8N594 471 aa8.36□□□□□ -1.07
SF3A3-206ENST00000487062 TDRD7Q8NHU6 1098 aaKnown RBP8.36□□□□□ -1.07
SF3A3-206ENST00000487062 TBC1D16Q8TBP0 767 aa8.36□□□□□ -1.07
SF3A3-206ENST00000487062 CNKSR1Q969H4 720 aa8.36□□□□□ -1.07
SF3A3-206ENST00000487062 ZNF622Q969S3 477 aaKnown RBP eCLIP8.36□□□□□ -1.07
SF3A3-206ENST00000487062 STRBPQ96SI9 672 aaKnown RBP8.36□□□□□ -1.07
SF3A3-206ENST00000487062 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.36□□□□□ -1.07
SF3A3-206ENST00000487062 COL1A1P02452 1464 aaPredicted RBP8.36□□□□□ -1.07
SF3A3-206ENST00000487062 DLEC1Q9Y238 1755 aa8.35□□□□□ -1.07
SF3A3-206ENST00000487062 LDHBP07195 334 aaKnown RBP8.35□□□□□ -1.07
SF3A3-206ENST00000487062 LDHCP07864 332 aa8.35□□□□□ -1.07
SF3A3-206ENST00000487062 CPA1P15085 419 aa8.35□□□□□ -1.07
SF3A3-206ENST00000487062 GSTO1P78417 241 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms