RNA–Protein interactions for RNA: ENST00000485136.5

CNOT10-217, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 2

Gene CNOT10, Length 608 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-217ENST00000485136 LRRC4BQ9NT99 713 aa10.03□□□□□ -0.8
CNOT10-217ENST00000485136 SOX1O00570 391 aaPredicted RBP10.02□□□□□ -0.81
CNOT10-217ENST00000485136 PF4P02776 101 aa10.02□□□□□ -0.81
CNOT10-217ENST00000485136 TFE3P19532 575 aaPredicted RBP10.02□□□□□ -0.81
CNOT10-217ENST00000485136 LMNB2Q03252 620 aa10.02□□□□□ -0.81
CNOT10-217ENST00000485136 FAM160A1Q05DH4 1040 aa10.02□□□□□ -0.81
CNOT10-217ENST00000485136 LCE2CQ5TA81 110 aa10.02□□□□□ -0.81
CNOT10-217ENST00000485136 FAM117BQ6P1L5 589 aa10.02□□□□□ -0.81
CNOT10-217ENST00000485136 TXNDC11Q6PKC3 985 aa10.02□□□□□ -0.81
CNOT10-217ENST00000485136 WFDC8Q8IUA0 241 aa10.02□□□□□ -0.81
CNOT10-217ENST00000485136 ZNF296Q8WUU4 475 aaPredicted RBP10.02□□□□□ -0.81
CNOT10-217ENST00000485136 TANGO6Q9C0B7 1094 aa10.02□□□□□ -0.81
CNOT10-217ENST00000485136 LINC01387J3KSC0 135 aa10.01□□□□□ -0.81
CNOT10-217ENST00000485136 CELA2BP08218 269 aaPredicted RBP10.01□□□□□ -0.81
CNOT10-217ENST00000485136 LMNB1P20700 586 aa10.01□□□□□ -0.81
CNOT10-217ENST00000485136 BMP6P22004 513 aa10.01□□□□□ -0.81
CNOT10-217ENST00000485136 DNAJA1P31689 397 aaKnown RBP10.01□□□□□ -0.81
CNOT10-217ENST00000485136 PIP4K2BP78356 416 aa10.01□□□□□ -0.81
CNOT10-217ENST00000485136 CAMK2GQ13555 558 aaPredicted RBP10.01□□□□□ -0.81
CNOT10-217ENST00000485136 SNAP47Q5SQN1 464 aa10.01□□□□□ -0.81
CNOT10-217ENST00000485136 FBXL19Q6PCT2 694 aa10.01□□□□□ -0.81
CNOT10-217ENST00000485136 LYPD4Q6UWN0 246 aa10.01□□□□□ -0.81
CNOT10-217ENST00000485136 SLC7A3Q8WY07 619 aa10.01□□□□□ -0.81
CNOT10-217ENST00000485136 SOX17Q9H6I2 414 aaPredicted RBP10.01□□□□□ -0.81
CNOT10-217ENST00000485136 PRDM6Q9NQX0 595 aa10.01□□□□□ -0.81
CNOT10-217ENST00000485136 KCNQ5Q9NR82 932 aa10.01□□□□□ -0.81
CNOT10-217ENST00000485136 NACADO15069 1562 aa10.01□□□□□ -0.81
CNOT10-217ENST00000485136 ARID5AQ03989 594 aa10□□□□□ -0.81
CNOT10-217ENST00000485136 RASIP1Q5U651 963 aa10□□□□□ -0.81
CNOT10-217ENST00000485136 HGSNATQ68CP4 663 aa10□□□□□ -0.81
CNOT10-217ENST00000485136 MSL1Q68DK7 614 aa10□□□□□ -0.81
CNOT10-217ENST00000485136 VPS37DQ86XT2 251 aa10□□□□□ -0.81
CNOT10-217ENST00000485136 STK35Q8TDR2 534 aa10□□□□□ -0.81
CNOT10-217ENST00000485136 WNT8BQ93098 351 aa10□□□□□ -0.81
CNOT10-217ENST00000485136 EMILIN2Q9BXX0 1053 aa10□□□□□ -0.81
CNOT10-217ENST00000485136 CBX8Q9HC52 389 aa10□□□□□ -0.81
CNOT10-217ENST00000485136 PPP1R1BQ9UD71 204 aaPredicted RBP10□□□□□ -0.81
CNOT10-217ENST00000485136 PRKAG2Q9UGJ0 569 aa10□□□□□ -0.81
CNOT10-217ENST00000485136 SUPT16HQ9Y5B9 1047 aaKnown RBP10□□□□□ -0.81
CNOT10-217ENST00000485136 GARTP22102 1010 aa9.99□□□□□ -0.81
CNOT10-217ENST00000485136 ARNTP27540 789 aa9.99□□□□□ -0.81
CNOT10-217ENST00000485136 ARL4DP49703 201 aa9.99□□□□□ -0.81
CNOT10-217ENST00000485136 GSTM4Q03013 218 aa9.99□□□□□ -0.81
CNOT10-217ENST00000485136 C19orf57Q0VDD7 668 aa9.99□□□□□ -0.81
CNOT10-217ENST00000485136 AP3B2Q13367 1082 aa9.99□□□□□ -0.81
CNOT10-217ENST00000485136 LRRC14Q15048 493 aa9.99□□□□□ -0.81
CNOT10-217ENST00000485136 GOLM1Q8NBJ4 401 aa9.99□□□□□ -0.81
CNOT10-217ENST00000485136 GMLQ99445 158 aa9.99□□□□□ -0.81
CNOT10-217ENST00000485136 CYP8B1Q9UNU6 501 aa9.99□□□□□ -0.81
CNOT10-217ENST00000485136 LLGL2Q6P1M3 1020 aa9.98□□□□□ -0.81
CNOT10-217ENST00000485136 TRIM42Q8IWZ5 723 aa9.98□□□□□ -0.81
CNOT10-217ENST00000485136 RASGRP4Q8TDF6 673 aa9.98□□□□□ -0.81
CNOT10-217ENST00000485136 EAF1Q96JC9 268 aaPredicted RBP9.98□□□□□ -0.81
CNOT10-217ENST00000485136 MIR1-1HGQ9H1L0 117 aa9.98□□□□□ -0.81
CNOT10-217ENST00000485136 OSGEPQ9NPF4 335 aa9.98□□□□□ -0.81
CNOT10-217ENST00000485136 STK17AQ9UEE5 414 aa9.98□□□□□ -0.81
CNOT10-217ENST00000485136 PCDHB5Q9Y5E4 795 aa9.98□□□□□ -0.81
CNOT10-217ENST00000485136 FSCN2O14926 492 aa9.97□□□□□ -0.81
CNOT10-217ENST00000485136 EIF4EBP3O60516 100 aaPredicted RBP9.97□□□□□ -0.81
CNOT10-217ENST00000485136 GREM1O60565 184 aa9.97□□□□□ -0.81
CNOT10-217ENST00000485136 GRIN3AQ8TCU5 1115 aa9.97□□□□□ -0.81
CNOT10-217ENST00000485136 WHAMMQ8TF30 809 aa9.97□□□□□ -0.81
CNOT10-217ENST00000485136 UBXN4Q92575 508 aa9.97□□□□□ -0.81
CNOT10-217ENST00000485136 CARD10Q9BWT7 1032 aa9.97□□□□□ -0.81
CNOT10-217ENST00000485136 NT5C1AQ9BXI3 368 aa9.97□□□□□ -0.81
CNOT10-217ENST00000485136 NID1P14543 1247 aa9.96□□□□□ -0.82
CNOT10-217ENST00000485136 SEPT6Q14141 434 aa9.96□□□□□ -0.82
CNOT10-217ENST00000485136 PDZD3Q86UT5 571 aa9.96□□□□□ -0.82
CNOT10-217ENST00000485136 CCDC84Q86UT8 332 aaPredicted RBP9.96□□□□□ -0.82
CNOT10-217ENST00000485136 SPATA32Q96LK8 384 aa9.96□□□□□ -0.82
CNOT10-217ENST00000485136 GSTP1P09211 210 aaKnown RBP9.95□□□□□ -0.82
CNOT10-217ENST00000485136 ATF4P18848 351 aaPredicted RBP9.95□□□□□ -0.82
CNOT10-217ENST00000485136 DGKGP49619 791 aa9.95□□□□□ -0.82
CNOT10-217ENST00000485136 ZNF252P-AS1Q0IIN9 211 aa9.95□□□□□ -0.82
CNOT10-217ENST00000485136 BNC2Q6ZN30 1099 aaPredicted RBP9.95□□□□□ -0.82
CNOT10-217ENST00000485136 FAM196AQ6ZSG2 479 aa9.95□□□□□ -0.82
CNOT10-217ENST00000485136 DMRTC2Q8IXT2 367 aaPredicted RBP9.95□□□□□ -0.82
CNOT10-217ENST00000485136 UBP1Q9NZI7 540 aa9.95□□□□□ -0.82
CNOT10-217ENST00000485136 F13A1P00488 732 aa9.94□□□□□ -0.82
CNOT10-217ENST00000485136 CYP11A1P05108 521 aa9.94□□□□□ -0.82
CNOT10-217ENST00000485136 ATP2B1P20020 1258 aa9.94□□□□□ -0.82
CNOT10-217ENST00000485136 APOBRQ0VD83 1088 aa9.94□□□□□ -0.82
CNOT10-217ENST00000485136 COL9A3Q14050 684 aaPredicted RBP9.94□□□□□ -0.82
CNOT10-217ENST00000485136 KLHL23Q8NBE8 558 aa9.94□□□□□ -0.82
CNOT10-217ENST00000485136 JARID2Q92833 1246 aaPredicted RBP9.94□□□□□ -0.82
CNOT10-217ENST00000485136 FGRP09769 529 aa9.93□□□□□ -0.82
CNOT10-217ENST00000485136 SETDB1Q15047 1291 aa9.93□□□□□ -0.82
CNOT10-217ENST00000485136 MAP1SQ66K74 1059 aaPredicted RBP9.93□□□□□ -0.82
CNOT10-217ENST00000485136 SCARA3Q6AZY7 606 aa9.93□□□□□ -0.82
CNOT10-217ENST00000485136 MCF2L2Q86YR7 1114 aa9.93□□□□□ -0.82
CNOT10-217ENST00000485136 MAP4K3Q8IVH8 894 aa9.93□□□□□ -0.82
CNOT10-217ENST00000485136 NEDD1Q8NHV4 660 aa9.93□□□□□ -0.82
CNOT10-217ENST00000485136 GATAD2BQ8WXI9 593 aa9.93□□□□□ -0.82
CNOT10-217ENST00000485136 GAL3ST3Q96A11 431 aa9.93□□□□□ -0.82
CNOT10-217ENST00000485136 KLHDC7BQ96G42 594 aa9.93□□□□□ -0.82
CNOT10-217ENST00000485136 CORO1BQ9BR76 489 aa9.93□□□□□ -0.82
CNOT10-217ENST00000485136 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.93□□□□□ -0.828e-8■■■□□ 15.1
CNOT10-217ENST00000485136 NRSN2Q9GZP1 204 aa9.93□□□□□ -0.82
CNOT10-217ENST00000485136 RRAGCQ9HB90 399 aa9.93□□□□□ -0.82
CNOT10-217ENST00000485136 ROBO2Q9HCK4 1378 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms