RNA–Protein interactions for RNA: ENST00000485136.5

CNOT10-217, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 2

Gene CNOT10, Length 608 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-217ENST00000485136 AEBP2Q6ZN18 517 aaPredicted RBP28.3■■■□□ 2.12
CNOT10-217ENST00000485136 CHIC1Q5VXU3 224 aa28.18■■■□□ 2.1
CNOT10-217ENST00000485136 PHF23Q9BUL5 403 aaPredicted RBP24.84■■□□□ 1.57
CNOT10-217ENST00000485136 SENP3Q9H4L4 574 aaPredicted RBP24.13■■□□□ 1.45
CNOT10-217ENST00000485136 PLPPR3Q6T4P5 718 aa23.15■■□□□ 1.3
CNOT10-217ENST00000485136 FOXD1Q16676 465 aa22.32■■□□□ 1.16
CNOT10-217ENST00000485136 ADRA2BP18089 450 aa21.75■■□□□ 1.07
CNOT10-217ENST00000485136 PPP6R1Q9UPN7 881 aa21.73■■□□□ 1.07
CNOT10-217ENST00000485136 MSH5O43196 834 aa21.04■□□□□ 0.96
CNOT10-217ENST00000485136 PIAS4Q8N2W9 510 aaPredicted RBP21.03■□□□□ 0.96
CNOT10-217ENST00000485136 KCNA4P22459 653 aa20.63■□□□□ 0.89
CNOT10-217ENST00000485136 PPP4R3CPQ6ZMV5 832 aa20.46■□□□□ 0.87
CNOT10-217ENST00000485136 POTEDQ86YR6 584 aa20.19■□□□□ 0.82
CNOT10-217ENST00000485136 NCBP3Q53F19 620 aaKnown RBP20.09■□□□□ 0.81
CNOT10-217ENST00000485136 SCAF1Q9H7N4 1312 aaKnown RBP19.9■□□□□ 0.78
CNOT10-217ENST00000485136 EHMT2Q96KQ7 1210 aa19.86■□□□□ 0.77
CNOT10-217ENST00000485136 NPM3O75607 178 aaKnown RBP19.8■□□□□ 0.76
CNOT10-217ENST00000485136 CNKSR2Q8WXI2 1034 aa19.76■□□□□ 0.75
CNOT10-217ENST00000485136 SLC4A1APQ9BWU0 796 aaKnown RBP19.76■□□□□ 0.75
CNOT10-217ENST00000485136 MAPK8IP2Q13387 824 aaPredicted RBP19.57■□□□□ 0.72
CNOT10-217ENST00000485136 CSRNP3Q8WYN3 585 aa19.34■□□□□ 0.69
CNOT10-217ENST00000485136 RNF216Q9NWF9 866 aaPredicted RBP19.23■□□□□ 0.67
CNOT10-217ENST00000485136 DMRT2Q9Y5R5 561 aa19.19■□□□□ 0.66
CNOT10-217ENST00000485136 DNAJC5BQ9UF47 199 aa19.12■□□□□ 0.65
CNOT10-217ENST00000485136 HOXD11P31277 338 aaPredicted RBP19.01■□□□□ 0.63
CNOT10-217ENST00000485136 ZBTB22O15209 634 aa19■□□□□ 0.63
CNOT10-217ENST00000485136 FOXD4L1Q9NU39 408 aa18.83■□□□□ 0.6
CNOT10-217ENST00000485136 SLC4A2P04920 1241 aa18.55■□□□□ 0.56
CNOT10-217ENST00000485136 DCAF8L1A6NGE4 600 aa18.35■□□□□ 0.53
CNOT10-217ENST00000485136 MYCNP04198 464 aaPredicted RBP18.29■□□□□ 0.52
CNOT10-217ENST00000485136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.13■□□□□ 0.49
CNOT10-217ENST00000485136 ATXN8OSP0DMR3 200 aa18.11■□□□□ 0.49
CNOT10-217ENST00000485136 U3KPZ7 1027 aaPredicted RBP17.9■□□□□ 0.46
CNOT10-217ENST00000485136 CACNB1Q02641 598 aaPredicted RBP17.89■□□□□ 0.45
CNOT10-217ENST00000485136 RNF39Q9H2S5 420 aa17.87■□□□□ 0.45
CNOT10-217ENST00000485136 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.86■□□□□ 0.45
CNOT10-217ENST00000485136 HNRNPUL2Q1KMD3 747 aaKnown RBP17.86■□□□□ 0.45
CNOT10-217ENST00000485136 SAMD1Q6SPF0 538 aaPredicted RBP17.83■□□□□ 0.44
CNOT10-217ENST00000485136 ATF5Q9Y2D1 282 aaPredicted RBP17.75■□□□□ 0.43
CNOT10-217ENST00000485136 C1QBPQ07021 282 aaKnown RBP17.7■□□□□ 0.42
CNOT10-217ENST00000485136 APLP2Q06481 763 aa17.55■□□□□ 0.4
CNOT10-217ENST00000485136 FKBP8Q14318 412 aa17.47■□□□□ 0.39
CNOT10-217ENST00000485136 ZNF219Q9P2Y4 722 aaPredicted RBP17.41■□□□□ 0.38
CNOT10-217ENST00000485136 SPINK5Q9NQ38 1064 aaPredicted RBP17.23■□□□□ 0.35
CNOT10-217ENST00000485136 TRHP20396 242 aaPredicted RBP17.2■□□□□ 0.34
CNOT10-217ENST00000485136 CAPN15O75808 1086 aa17.14■□□□□ 0.33
CNOT10-217ENST00000485136 POLA2Q14181 598 aa17.04■□□□□ 0.32
CNOT10-217ENST00000485136 MKRN4PQ13434 485 aaPredicted RBP17.01■□□□□ 0.31
CNOT10-217ENST00000485136 FBLN2P98095 1184 aa16.98■□□□□ 0.31
CNOT10-217ENST00000485136 SPDYE4A6NLX3 237 aa16.91■□□□□ 0.3
CNOT10-217ENST00000485136 AMER1Q5JTC6 1135 aaPredicted RBP16.91■□□□□ 0.3
CNOT10-217ENST00000485136 RTN4Q9NQC3 1192 aaKnown RBP16.88■□□□□ 0.29
CNOT10-217ENST00000485136 ABCB7O75027 752 aa16.87■□□□□ 0.29
CNOT10-217ENST00000485136 ZBTB12Q9Y330 459 aaPredicted RBP16.81■□□□□ 0.28
CNOT10-217ENST00000485136 DSG3P32926 999 aa16.74■□□□□ 0.27
CNOT10-217ENST00000485136 PROM2Q8N271 834 aa16.7■□□□□ 0.26
CNOT10-217ENST00000485136 FBXO3Q9UK99 471 aa16.68■□□□□ 0.26
CNOT10-217ENST00000485136 OSCARQ8IYS5 282 aa16.46■□□□□ 0.23
CNOT10-217ENST00000485136 VASPP50552 380 aaPredicted RBP16.45■□□□□ 0.22
CNOT10-217ENST00000485136 ZNF692Q9BU19 519 aaPredicted RBP16.42■□□□□ 0.22
CNOT10-217ENST00000485136 SPDYE2BA6NHP3 402 aa16.39■□□□□ 0.21
CNOT10-217ENST00000485136 SPDYE6P0CI01 402 aa16.39■□□□□ 0.21
CNOT10-217ENST00000485136 SPDYE2Q495Y8 402 aa16.39■□□□□ 0.21
CNOT10-217ENST00000485136 SSUH2Q9Y2M2 353 aa16.33■□□□□ 0.2
CNOT10-217ENST00000485136 IFNLR1Q8IU57 520 aaPredicted RBP16.26■□□□□ 0.19
CNOT10-217ENST00000485136 PABPN1Q86U42 306 aaKnown RBP eCLIP16.23■□□□□ 0.19
CNOT10-217ENST00000485136 SLC24A1O60721 1099 aa16.18■□□□□ 0.18
CNOT10-217ENST00000485136 STAG3Q9UJ98 1225 aa16.16■□□□□ 0.18
CNOT10-217ENST00000485136 RBM42Q9BTD8 480 aaKnown RBP16.14■□□□□ 0.17
CNOT10-217ENST00000485136 KLHL34Q8N239 644 aa16.04■□□□□ 0.16
CNOT10-217ENST00000485136 PLCD3Q8N3E9 789 aa16.02■□□□□ 0.16
CNOT10-217ENST00000485136 SPOCK2Q92563 424 aa15.98■□□□□ 0.15
CNOT10-217ENST00000485136 MIER1Q8N108 512 aa15.96■□□□□ 0.15
CNOT10-217ENST00000485136 PKD2Q13563 968 aa15.93■□□□□ 0.14
CNOT10-217ENST00000485136 POTEHQ6S545 545 aa15.88■□□□□ 0.13
CNOT10-217ENST00000485136 PLEKHG5O94827 1062 aa15.85■□□□□ 0.13
CNOT10-217ENST00000485136 AKT1S1Q96B36 256 aa15.84■□□□□ 0.13
CNOT10-217ENST00000485136 DCAF8L2P0C7V8 631 aa15.83■□□□□ 0.12
CNOT10-217ENST00000485136 ZBTB47Q9UFB7 747 aaPredicted RBP15.8■□□□□ 0.12
CNOT10-217ENST00000485136 SPDYE1Q8NFV5 336 aaPredicted RBP15.78■□□□□ 0.12
CNOT10-217ENST00000485136 ECM2O94769 699 aaPredicted RBP15.74■□□□□ 0.11
CNOT10-217ENST00000485136 CLEC11AQ9Y240 323 aa15.69■□□□□ 0.1
CNOT10-217ENST00000485136 REM2Q8IYK8 340 aaPredicted RBP15.68■□□□□ 0.1
CNOT10-217ENST00000485136 CIZ1Q9ULV3 898 aaPredicted RBP15.64■□□□□ 0.09
CNOT10-217ENST00000485136 PRR29P0C7W0 189 aa15.62■□□□□ 0.09
CNOT10-217ENST00000485136 PLCB2Q00722 1185 aa15.62■□□□□ 0.09
CNOT10-217ENST00000485136 CHRDL2Q6WN34 429 aa15.61■□□□□ 0.09
CNOT10-217ENST00000485136 RGL2O15211 777 aa15.57■□□□□ 0.08
CNOT10-217ENST00000485136 CREBZFQ9NS37 354 aa15.55■□□□□ 0.08
CNOT10-217ENST00000485136 PITPNM1O00562 1244 aa15.5■□□□□ 0.07
CNOT10-217ENST00000485136 NUBP1P53384 320 aa15.5■□□□□ 0.07
CNOT10-217ENST00000485136 TRIM41Q8WV44 630 aa15.5■□□□□ 0.07
CNOT10-217ENST00000485136 GSE1Q14687 1217 aa15.49■□□□□ 0.07
CNOT10-217ENST00000485136 NPM1P06748 294 aaKnown RBP eCLIP15.45■□□□□ 0.06
CNOT10-217ENST00000485136 MNX1P50219 401 aaPredicted RBP15.44■□□□□ 0.06
CNOT10-217ENST00000485136 BBXQ8WY36 941 aaPredicted RBP15.44■□□□□ 0.06
CNOT10-217ENST00000485136 HAP1P54257 671 aaPredicted RBP15.41■□□□□ 0.06
CNOT10-217ENST00000485136 DCAF8Q5TAQ9 597 aa15.41■□□□□ 0.06
CNOT10-217ENST00000485136 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.41■□□□□ 0.06
CNOT10-217ENST00000485136 FAM212AQ96EL1 285 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms