RNA–Protein interactions for RNA: ENST00000484006.1

THUMPD3-209, Transcript of THUMP domain containing 3, humanhuman

TSL 4

Gene THUMPD3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-209ENST00000484006 PTPN23Q9H3S7 1636 aa7.96□□□□□ -1.13
THUMPD3-209ENST00000484006 PLEKHH2Q8IVE3 1493 aa7.96□□□□□ -1.13
THUMPD3-209ENST00000484006 IGLV1-40P01703 118 aa7.96□□□□□ -1.14
THUMPD3-209ENST00000484006 UVSSAQ2YD98 709 aa7.96□□□□□ -1.14
THUMPD3-209ENST00000484006 PMEPA1Q969W9 287 aa7.96□□□□□ -1.14
THUMPD3-209ENST00000484006 POP1Q99575 1024 aaKnown RBP7.96□□□□□ -1.14
THUMPD3-209ENST00000484006 KRTAP9-2Q9BYQ4 174 aa7.96□□□□□ -1.14
THUMPD3-209ENST00000484006 SEC31BQ9NQW1 1179 aa7.96□□□□□ -1.14
THUMPD3-209ENST00000484006 SH2B1Q9NRF2 756 aaPredicted RBP7.96□□□□□ -1.14
THUMPD3-209ENST00000484006 RRP7BPQ9NSQ0 103 aa7.96□□□□□ -1.14
THUMPD3-209ENST00000484006 KCNK4Q9NYG8 393 aa7.96□□□□□ -1.14
THUMPD3-209ENST00000484006 SLAIN2Q9P270 581 aa7.96□□□□□ -1.14
THUMPD3-209ENST00000484006 SALL4Q9UJQ4 1053 aa7.96□□□□□ -1.14
THUMPD3-209ENST00000484006 MIA2Q96PC5 1412 aa7.95□□□□□ -1.14
THUMPD3-209ENST00000484006 ARHGEF12Q9NZN5 1544 aa7.95□□□□□ -1.14
THUMPD3-209ENST00000484006 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.95□□□□□ -1.14
THUMPD3-209ENST00000484006 WISP1O95388 367 aa7.95□□□□□ -1.14
THUMPD3-209ENST00000484006 EPHA1P21709 976 aa7.95□□□□□ -1.14
THUMPD3-209ENST00000484006 SSTR4P31391 388 aa7.95□□□□□ -1.14
THUMPD3-209ENST00000484006 NOM1Q5C9Z4 860 aaKnown RBP7.95□□□□□ -1.14
THUMPD3-209ENST00000484006 ATCAYQ86WG3 371 aa7.95□□□□□ -1.14
THUMPD3-209ENST00000484006 WNT8BQ93098 351 aa7.95□□□□□ -1.14
THUMPD3-209ENST00000484006 CARD10Q9BWT7 1032 aa7.95□□□□□ -1.14
THUMPD3-209ENST00000484006 CNTN3Q9P232 1028 aa7.95□□□□□ -1.14
THUMPD3-209ENST00000484006 POGZQ7Z3K3 1410 aa7.95□□□□□ -1.14
THUMPD3-209ENST00000484006 ABCC1P33527 1531 aa7.94□□□□□ -1.14
THUMPD3-209ENST00000484006 TM4SF5O14894 197 aa7.94□□□□□ -1.14
THUMPD3-209ENST00000484006 CES1P23141 567 aa7.94□□□□□ -1.14
THUMPD3-209ENST00000484006 ADAMTSL4Q6UY14 1074 aa7.94□□□□□ -1.14
THUMPD3-209ENST00000484006 ARMC10Q8N2F6 343 aa7.94□□□□□ -1.14
THUMPD3-209ENST00000484006 HELQQ8TDG4 1101 aa7.94□□□□□ -1.14
THUMPD3-209ENST00000484006 EDEM1Q92611 657 aa7.94□□□□□ -1.14
THUMPD3-209ENST00000484006 KLHDC7BQ96G42 594 aa7.94□□□□□ -1.14
THUMPD3-209ENST00000484006 OSGEPQ9NPF4 335 aa7.94□□□□□ -1.14
THUMPD3-209ENST00000484006 ZNF518AQ6AHZ1 1483 aa7.94□□□□□ -1.14
THUMPD3-209ENST00000484006 ARAP3Q8WWN8 1544 aa7.93□□□□□ -1.14
THUMPD3-209ENST00000484006 H3BRJ5 948 aa7.93□□□□□ -1.14
THUMPD3-209ENST00000484006 PIP4K2BP78356 416 aa7.93□□□□□ -1.14
THUMPD3-209ENST00000484006 DNM1Q05193 864 aaKnown RBP7.93□□□□□ -1.14
THUMPD3-209ENST00000484006 C8orf34Q49A92 452 aa7.93□□□□□ -1.14
THUMPD3-209ENST00000484006 KIAA1211Q6ZU35 1233 aa7.93□□□□□ -1.14
THUMPD3-209ENST00000484006 C1orf127Q8N9H9 656 aa7.93□□□□□ -1.14
THUMPD3-209ENST00000484006 UTP4Q969X6 686 aaKnown RBP7.93□□□□□ -1.14
THUMPD3-209ENST00000484006 FAM46AQ96IP4 442 aaKnown RBP7.93□□□□□ -1.14
THUMPD3-209ENST00000484006 KANSL3Q9P2N6 904 aa7.93□□□□□ -1.14
THUMPD3-209ENST00000484006 YEATS2Q9ULM3 1422 aa7.93□□□□□ -1.14
THUMPD3-209ENST00000484006 CCDC141Q6ZP82 1450 aa7.93□□□□□ -1.14
THUMPD3-209ENST00000484006 SART1O43290 800 aaKnown RBP7.92□□□□□ -1.14
THUMPD3-209ENST00000484006 COBLO75128 1261 aa7.92□□□□□ -1.14
THUMPD3-209ENST00000484006 MZF1P28698 734 aaPredicted RBP7.92□□□□□ -1.14
THUMPD3-209ENST00000484006 CD97P48960 835 aa7.92□□□□□ -1.14
THUMPD3-209ENST00000484006 ARL4DP49703 201 aa7.92□□□□□ -1.14
THUMPD3-209ENST00000484006 ALKBH2Q6NS38 261 aa7.92□□□□□ -1.14
THUMPD3-209ENST00000484006 GGT6Q6P531 493 aa7.92□□□□□ -1.14
THUMPD3-209ENST00000484006 KIAA1107Q9UPP5 1409 aa7.92□□□□□ -1.14
THUMPD3-209ENST00000484006 ZFYVE16Q7Z3T8 1539 aa7.92□□□□□ -1.14
THUMPD3-209ENST00000484006 KRTAP9-6A0A140TA67 174 aa7.91□□□□□ -1.14
THUMPD3-209ENST00000484006 PDE2AO00408 941 aaPredicted RBP7.91□□□□□ -1.14
THUMPD3-209ENST00000484006 DDX3YO15523 660 aaKnown RBP7.91□□□□□ -1.14
THUMPD3-209ENST00000484006 NFIAQ12857 509 aa7.91□□□□□ -1.14
THUMPD3-209ENST00000484006 GGNBP2Q9H3C7 697 aa7.91□□□□□ -1.14
THUMPD3-209ENST00000484006 DZANK1Q9NVP4 752 aa7.91□□□□□ -1.14
THUMPD3-209ENST00000484006 ABCC5O15440 1437 aa7.91□□□□□ -1.14
THUMPD3-209ENST00000484006 DAPK1P53355 1430 aa7.91□□□□□ -1.14
THUMPD3-209ENST00000484006 C9orf84Q5VXU9 1444 aa7.91□□□□□ -1.14
THUMPD3-209ENST00000484006 FRMPD1Q5SYB0 1578 aa7.9□□□□□ -1.14
THUMPD3-209ENST00000484006 MBD5Q9P267 1494 aa7.9□□□□□ -1.14
THUMPD3-209ENST00000484006 NFKBIEO00221 500 aa7.9□□□□□ -1.14
THUMPD3-209ENST00000484006 KIF3BO15066 747 aa7.9□□□□□ -1.14
THUMPD3-209ENST00000484006 ADAM11O75078 769 aa7.9□□□□□ -1.14
THUMPD3-209ENST00000484006 PDGFAP04085 211 aa7.9□□□□□ -1.14
THUMPD3-209ENST00000484006 ANKRD34AQ69YU3 496 aa7.9□□□□□ -1.14
THUMPD3-209ENST00000484006 CLEC10AQ8IUN9 316 aa7.9□□□□□ -1.14
THUMPD3-209ENST00000484006 UBASH3BQ8TF42 649 aa7.9□□□□□ -1.14
THUMPD3-209ENST00000484006 FOXD4L4Q8WXT5 416 aaPredicted RBP7.9□□□□□ -1.14
THUMPD3-209ENST00000484006 MYRFLQ96LU7 910 aa7.9□□□□□ -1.14
THUMPD3-209ENST00000484006 RICTORQ6R327 1708 aa7.89□□□□□ -1.15
THUMPD3-209ENST00000484006 HECW2Q9P2P5 1572 aa7.89□□□□□ -1.15
THUMPD3-209ENST00000484006 ATP7AQ04656 1500 aa7.89□□□□□ -1.15
THUMPD3-209ENST00000484006 TCOF1Q13428 1488 aaKnown RBP7.89□□□□□ -1.15
THUMPD3-209ENST00000484006 ANKRD30AQ9BXX3 1397 aa7.89□□□□□ -1.15
THUMPD3-209ENST00000484006 GRIK1P39086 918 aa7.89□□□□□ -1.15
THUMPD3-209ENST00000484006 EIF1AXP47813 144 aaKnown RBP7.89□□□□□ -1.15
THUMPD3-209ENST00000484006 RNF43Q68DV7 783 aa7.89□□□□□ -1.15
THUMPD3-209ENST00000484006 INTS5Q6P9B9 1019 aaKnown RBP7.89□□□□□ -1.15
THUMPD3-209ENST00000484006 TRIM42Q8IWZ5 723 aa7.89□□□□□ -1.15
THUMPD3-209ENST00000484006 GTF3C2Q8WUA4 911 aaPredicted RBP7.89□□□□□ -1.15
THUMPD3-209ENST00000484006 SLC7A3Q8WY07 619 aa7.89□□□□□ -1.15
THUMPD3-209ENST00000484006 RNF208Q9H0X6 261 aa7.89□□□□□ -1.15
THUMPD3-209ENST00000484006 C7orf69Q9H7B7 122 aa7.89□□□□□ -1.15
THUMPD3-209ENST00000484006 RRBP1Q9P2E9 1410 aaKnown RBP7.88□□□□□ -1.15
THUMPD3-209ENST00000484006 KIF15Q9NS87 1388 aa7.88□□□□□ -1.15
THUMPD3-209ENST00000484006 HMX2A2RU54 273 aa7.88□□□□□ -1.15
THUMPD3-209ENST00000484006 TGFB1P01137 390 aa7.88□□□□□ -1.15
THUMPD3-209ENST00000484006 TRIM26Q12899 539 aaPredicted RBP7.88□□□□□ -1.15
THUMPD3-209ENST00000484006 AAMPQ13685 434 aa7.88□□□□□ -1.15
THUMPD3-209ENST00000484006 ZDHHC13Q8IUH4 622 aa7.88□□□□□ -1.15
THUMPD3-209ENST00000484006 FAM20CQ8IXL6 584 aa7.88□□□□□ -1.15
THUMPD3-209ENST00000484006 TMEM102Q8N9M5 508 aaPredicted RBP7.88□□□□□ -1.15
THUMPD3-209ENST00000484006 FAM83CQ9BQN1 747 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms